Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 2.7e-146 521.9 253 100.0
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 7.6e-93 344.4 253 72.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.3e-89 332.8 253 71.1
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.5e-88 330.1 248 71.0
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 4.2e-67 258.8 178 75.8
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 4.2e-67 258.8 178 75.8
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 4.2e-67 258.8 178 75.8
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 2.1e-66 256.5 178 75.3
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 2.7e-66 256.1 178 75.3
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.7e-66 256.1 178 75.3
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.4e-65 253.8 178 74.2
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 8.8e-65 251.1 178 73.0
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.5e-64 250.4 178 73.0
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.5e-64 250.4 178 73.0
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 2.2e-63 246.5 178 71.9
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 2.4e-62 243.0 178 71.3
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 7.7e-61 238.0 172 72.7
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.2e-53 214.2 164 64.6
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 2.7e-53 213.0 219 51.6
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 4.5e-53 212.2 164 64.0
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 4.5e-53 212.2 162 65.4
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.9e-53 211.8 164 64.0
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 7.7e-53 211.5 165 64.2
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.7e-52 210.3 165 63.6
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 2.3e-52 209.9 161 64.0
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 3.8e-52 209.1 161 66.5
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 3.8e-52 209.1 159 65.4
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 5.0e-52 208.8 159 66.0
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 8.6e-52 208.0 156 65.4
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 8.6e-52 208.0 156 65.4
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 8.6e-52 208.0 162 63.6
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.1e-51 207.6 159 63.5
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.9e-51 206.8 164 61.0
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 2.5e-51 206.5 158 66.5
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 7.2e-51 204.9 158 64.6
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 9.5e-51 204.5 159 62.3
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 9.5e-51 204.5 162 64.2
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.2e-50 204.1 164 60.4
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.2e-50 204.1 164 60.4
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-50 204.1 165 60.6
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.2e-50 204.1 161 62.1
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.2e-50 204.1 159 62.9
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.6e-50 203.8 165 60.6
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-50 203.8 165 60.6
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.8e-50 203.0 165 60.0
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 4.7e-50 202.2 154 64.9
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 8.0e-50 201.4 158 63.9
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-49 201.1 156 61.5
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.0e-49 199.5 162 63.6
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 3.0e-49 199.5 150 66.0
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 3.0e-49 199.5 162 62.3
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 4.0e-49 199.1 155 63.2
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 4.0e-49 199.1 162 62.3
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 5.2e-49 198.7 159 61.6
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 5.2e-49 198.7 159 61.6
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 6.8e-49 198.4 218 49.1
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 8.9e-49 198.0 161 57.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.2e-48 197.6 160 60.6
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.2e-48 197.6 172 58.7
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 2.0e-48 196.8 157 63.1
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 2.6e-48 196.4 161 60.9
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 3.4e-48 196.1 167 59.9
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 4.4e-48 195.7 151 64.2
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 9.8e-48 194.5 146 65.1
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.3e-47 194.1 149 63.8
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 2.2e-47 193.4 147 65.3
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 3.7e-47 192.6 158 61.4
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.1e-46 191.0 163 58.3
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.4e-46 190.7 161 56.5
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.8e-46 190.3 182 54.4
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.4e-46 189.9 144 63.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 4.1e-46 189.1 155 60.0
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 7.0e-46 188.3 170 60.6
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 7.0e-46 188.3 170 60.6
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.2e-45 187.6 155 60.6
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-45 186.0 200 50.0
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 4.5e-45 185.7 162 56.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 4.5e-45 185.7 162 56.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 4.5e-45 185.7 159 57.9
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 7.8e-45 184.9 155 58.7
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.7e-44 183.7 173 54.3
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 3.8e-44 182.6 158 56.3
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 5.0e-44 182.2 159 56.6
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 6.6e-44 181.8 156 56.4
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 6.6e-44 181.8 174 54.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 1.5e-43 180.6 158 55.1
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.5e-43 180.6 132 65.9
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.9e-43 180.3 159 55.3
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 4.3e-43 179.1 218 45.4
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 2.1e-42 176.8 159 54.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.4e-41 174.1 151 57.6
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 3.4e-40 169.5 146 55.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 6.4e-39 165.2 157 51.0
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 1.3e-36 157.5 144 62.5
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 3.0e-36 156.4 153 54.9
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.3e-35 151.8 133 56.4
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.2e-34 151.0 146 54.1
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.6e-34 150.6 132 59.1
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.8e-33 147.1 144 51.4
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 3.1e-33 146.4 131 58.0
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 5.2e-33 145.6 142 50.7
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.5e-32 144.1 158 49.4
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.0e-32 143.7 154 47.4
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 8.3e-31 138.3 145 51.0
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.2e-29 134.4 138 50.7
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 3.5e-29 132.9 154 47.4
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.3e-28 131.0 144 43.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 3.9e-28 129.4 109 61.5
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 8.6e-28 128.3 119 56.3
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 7.3e-27 125.2 158 42.4
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 8.1e-26 121.7 157 44.6
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.2e-21 107.8 234 33.3
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.1e-20 102.4 86 60.5
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.5e-19 100.1 133 43.6
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 2.1e-18 97.1 114 47.4
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-15 87.4 45 86.7
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 1.7e-15 87.4 45 86.7
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 6.4e-15 85.5 149 31.5
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 1.4e-14 84.3 167 34.7
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 4.2e-06 56.2 31 77.4


User provided reference genes

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