Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p77490 Brassica napus HOM05D011073 ORTHO05D013800 3.0e-44 181.8 115 100.0
BcaB04g20778 Brassica carinata HOM05D011073 ORTHO05D013800 2.4e-41 172.2 115 95.7
C03p10570 Brassica napus HOM05D011073 ORTHO05D013800 1.1e-38 163.3 99 94.9
BraA02t06724Z Brassica rapa HOM05D011073 ORTHO05D013800 3.9e-36 154.8 108 95.4
A05p19800 Brassica napus HOM05D011073 ORTHO05D013800 6.5e-31 137.5 94 86.2
BolC9t54509H Brassica oleracea HOM05D011073 ORTHO05D013800 7.1e-30 134.0 104 87.5
A06p37820 Brassica napus HOM05D011073 ORTHO05D013800 2.7e-29 132.1 80 93.8
BolC4t22963H Brassica oleracea HOM05D011073 ORTHO05D013800 1.3e-28 129.8 73 97.3
BraA05t20886Z Brassica rapa HOM05D003089 ORTHO05D001766 8.2e-26 120.6 95 77.9
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 3.0e-20 102.1 106 71.7
Sp7g05490 Schrenkiella parvula HOM05D003795 ORTHO05D004308 8.7e-20 100.5 102 70.6
BcaC04g22717 Brassica carinata HOM05D011073 ORTHO05D013800 2.2e-18 95.9 65 96.9
Carub.0007s3228 Capsella rubella HOM05D003795 ORTHO05D004308 3.4e-16 88.6 81 74.1
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 3.8e-15 85.1 82 73.2
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 5.0e-15 84.7 108 62.0
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 5.5e-14 81.3 103 60.2
BcaB06g27061 Brassica carinata HOM05D003795 ORTHO05D004308 1.0e-12 77.0 101 58.4
AL7G45860 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.8e-12 76.3 81 69.1
C04p43990 Brassica napus HOM05D003795 ORTHO05D004308 1.8e-12 76.3 58 81.0
BolC4t25981H Brassica oleracea HOM05D003795 ORTHO05D004308 1.8e-12 76.3 58 81.0
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 1.8e-12 76.3 114 53.5
BcaC02g09547 Brassica carinata HOM05D003795 ORTHO05D004308 2.3e-12 75.9 82 67.1
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 8.8e-12 73.9 81 67.9
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 2.5e-11 72.4 88 56.8
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 1.1e-09 67.0 101 51.5
AUR62010625 Chenopodium quinoa HOM05D003795 ORTHO05D004308 1.4e-09 66.6 91 56.0
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 6.9e-09 64.3 85 54.1
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 9.1e-09 63.9 80 60.0
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 9.1e-09 63.9 80 60.0
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 4.5e-08 61.6 92 51.1
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 1.3e-07 60.1 102 52.0
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 2.9e-07 58.9 112 49.1
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 6.5e-07 57.8 111 48.6
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 8.5e-07 57.4 66 59.1
Sabra16G0322500 Salix brachista HOM05D003795 ORTHO05D004308 8.5e-07 57.4 112 46.4
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 2.5e-06 55.8 58 63.8
A04p10490 Brassica napus HOM05D003795 ORTHO05D004308 2.5e-06 55.8 37 83.8
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 3.2e-06 55.5 126 47.6
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 5.5e-06 54.7 102 45.1
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 9.4e-06 53.9 127 41.7


User provided reference genes

Program Settings