Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 1.3e-76 289.7 149 100.0
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 2.5e-75 285.4 149 98.7
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 3.1e-70 268.5 149 94.0
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 4.1e-70 268.1 149 94.0
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 1.3e-63 246.5 150 90.0
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 2.2e-55 219.2 150 83.3
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 9.8e-48 193.7 148 77.7
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 1.9e-43 179.5 148 74.3
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 1.5e-40 169.9 147 68.0
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 8.3e-39 164.1 155 68.4
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 1.0e-36 157.1 146 63.7
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 3.0e-36 155.6 144 67.4
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.8e-34 149.1 154 60.4
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 7.8e-29 131.0 148 54.7
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 5.8e-24 114.8 165 48.5
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 3.2e-22 109.0 157 44.6
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.2e-21 107.1 121 55.4
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.2e-21 107.1 121 55.4
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 2.7e-21 105.9 94 62.8
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 1.0e-20 104.0 155 45.2
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 3.0e-20 102.4 127 51.2
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 3.0e-20 102.4 80 66.2
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 6.6e-20 101.3 80 63.8
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 1.1e-19 100.5 84 64.3
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 1.5e-19 100.1 161 42.2
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.9e-19 99.8 89 62.9
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.9e-19 99.8 153 43.8
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 3.3e-19 99.0 86 61.6
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 4.3e-19 98.6 87 60.9
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 4.3e-19 98.6 85 58.8
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 4.3e-19 98.6 165 42.4
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 4.3e-19 98.6 157 42.7
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.6e-18 96.7 153 43.8
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 1.6e-18 96.7 77 67.5
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 2.8e-18 95.9 77 63.6
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 3.6e-18 95.5 75 65.3
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 3.6e-18 95.5 94 56.4
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 3.6e-18 95.5 80 61.2
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 4.8e-18 95.1 100 52.0
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 4.8e-18 95.1 77 62.3
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 4.8e-18 95.1 155 43.9
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 8.1e-18 94.4 146 41.1
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.1e-17 94.0 77 61.0
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.1e-17 94.0 80 57.5
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 1.1e-17 94.0 77 62.3
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.4e-17 93.6 80 58.8
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 1.4e-17 93.6 83 56.6
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.4e-17 93.6 99 54.5
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 1.8e-17 93.2 87 58.6
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.8e-17 93.2 153 40.5
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 1.8e-17 93.2 80 58.8
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 2.4e-17 92.8 80 56.2
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.4e-17 92.8 81 55.6
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 3.1e-17 92.4 151 43.7
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 4.0e-17 92.0 101 50.5
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 4.0e-17 92.0 77 61.0
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 4.0e-17 92.0 73 63.0
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 5.3e-17 91.7 80 60.0
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 6.9e-17 91.3 86 58.1
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 6.9e-17 91.3 94 53.2
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 9.0e-17 90.9 113 48.7
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-16 90.5 99 54.5
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.5e-16 90.1 82 56.1
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 2.6e-16 89.4 79 57.0
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 2.6e-16 89.4 78 57.7
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 2.6e-16 89.4 79 58.2
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 5.8e-16 88.2 83 54.2
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 5.8e-16 88.2 93 52.7
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 7.6e-16 87.8 74 60.8
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 9.9e-16 87.4 86 53.5
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 9.9e-16 87.4 75 56.0
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 9.9e-16 87.4 75 56.0
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 1.7e-15 86.7 79 55.7
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.7e-15 86.7 79 57.0
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 3.8e-15 85.5 90 50.0
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 3.8e-15 85.5 142 38.0
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 4.9e-15 85.1 88 53.4
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 6.4e-15 84.7 79 54.4
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 6.4e-15 84.7 142 37.3
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 8.4e-15 84.3 79 53.2
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 8.4e-15 84.3 99 49.5
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 1.4e-14 83.6 74 62.2
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.9e-14 83.2 77 54.5
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 4.2e-14 82.0 87 48.3
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.2e-13 80.5 65 64.6
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 1.6e-13 80.1 75 56.0
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 2.1e-13 79.7 90 51.1
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.0e-12 77.4 65 63.1
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.0e-12 77.4 72 54.2
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 8.7e-12 74.3 72 54.2
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 8.1e-10 67.8 54 68.5
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 5.3e-09 65.1 115 33.9
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 4.5e-08 62.0 127 32.3
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 9.9e-08 60.8 68 44.1
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 2.9e-07 59.3 49 53.1
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 1.1e-06 57.4 75 45.3
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 9.3e-06 54.3 53 49.1


User provided reference genes

Program Settings