Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 5.3e-201 704.1 355 100.0
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.6e-200 702.6 355 99.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 2.9e-199 698.4 355 99.2
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.8e-188 662.5 355 95.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 2.0e-187 659.1 355 94.9
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.6e-176 622.9 356 90.7
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 2.1e-173 612.5 346 91.3
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.3e-170 603.2 358 87.2
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.0e-168 595.9 358 85.8
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 7.5e-163 577.4 358 84.4
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.1e-159 564.7 358 82.1
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 9.9e-147 523.9 342 79.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 9.9e-139 497.3 358 75.7
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.3e-135 486.9 344 72.1
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.7e-128 462.6 329 70.5
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.9e-126 456.4 330 68.5
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.9e-126 456.4 284 75.7
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 5.6e-126 454.9 331 67.7
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 7.4e-126 454.5 342 67.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.6e-125 453.4 326 69.9
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.6e-125 453.4 342 67.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 8.1e-125 451.1 331 67.4
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.1e-124 450.7 344 66.9
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 6.9e-124 448.0 295 72.9
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.0e-124 447.6 284 75.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.5e-123 446.8 311 71.4
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.0e-123 446.4 291 73.5
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 3.4e-123 445.7 348 64.9
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.4e-123 445.7 342 66.1
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.4e-123 445.7 347 65.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.4e-123 445.7 284 74.6
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.9e-122 442.6 323 69.3
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 3.8e-122 442.2 318 68.2
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.8e-122 442.2 284 73.6
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 3.8e-122 442.2 351 64.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.4e-122 441.4 341 66.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.4e-122 441.4 299 71.9
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.4e-121 440.3 282 73.4
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.9e-121 439.9 286 74.1
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.2e-121 439.1 351 65.0
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 3.2e-121 439.1 337 66.8
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 4.2e-121 438.7 284 72.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 5.5e-121 438.3 338 65.7
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 7.1e-121 438.0 338 65.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 7.1e-121 438.0 325 69.2
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.2e-120 437.2 295 72.9
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.6e-120 436.8 285 73.0
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 2.1e-120 436.4 325 68.0
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 2.7e-120 436.0 290 70.7
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.7e-120 436.0 342 65.5
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 2.7e-120 436.0 312 68.6
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 7.9e-120 434.5 314 70.1
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.3e-119 433.7 355 63.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.9e-119 432.2 380 60.5
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 3.9e-119 432.2 312 69.2
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 5.1e-119 431.8 321 68.5
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.3e-118 429.1 281 71.9
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.6e-118 428.3 311 68.2
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 9.6e-118 427.6 339 64.6
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 9.6e-118 427.6 316 66.1
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.8e-117 426.0 340 63.2
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 6.2e-117 424.9 283 70.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-116 424.1 281 71.2
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.1e-116 424.1 339 63.7
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.4e-116 422.9 306 69.0
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 6.9e-116 421.4 325 62.2
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 9.0e-116 421.0 322 66.1
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 9.0e-116 421.0 265 73.2
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.2e-115 420.6 346 62.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.5e-115 420.2 289 69.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.6e-115 419.5 313 66.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.2e-114 416.4 256 75.4
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 4.9e-114 415.2 309 66.3
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 8.4e-114 414.5 289 69.2
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.1e-113 414.1 298 70.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.4e-113 413.7 281 71.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.1e-113 411.4 266 74.1
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 7.1e-113 411.4 295 70.2
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.6e-112 410.2 320 65.6
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.7e-112 409.5 298 68.8
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 6.1e-112 408.3 294 68.0
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 3.9e-111 405.6 384 56.8
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 8.2e-109 397.9 336 59.8
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.4e-108 397.1 287 68.3
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 6.9e-108 394.8 340 60.9
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 6.9e-108 394.8 297 68.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.2e-106 389.8 401 51.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 3.2e-105 386.0 279 66.3
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 6.1e-104 381.7 304 62.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 3.3e-102 375.9 308 60.1
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.2e-96 357.5 309 60.2
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.6e-96 355.9 229 72.9
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.5e-91 340.5 270 59.3
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 4.5e-91 339.0 352 48.9
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.9e-87 325.9 275 61.1
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.7e-86 322.0 266 56.8
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 8.2e-85 318.2 319 55.2
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.0e-83 313.5 278 54.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.0e-82 311.2 279 59.1
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.2e-82 310.1 302 56.3
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 2.5e-81 306.6 320 52.8
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 8.8e-71 271.6 154 77.3
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.1e-68 263.1 223 61.0
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.1e-60 238.0 153 73.9
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.6e-56 224.2 267 45.7
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.8e-55 218.8 134 76.9
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.5e-54 217.6 134 75.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.2e-53 213.8 135 74.1
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.7e-50 204.1 281 43.8
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.9e-45 186.0 136 61.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.9e-39 165.2 97 79.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.5e-33 147.1 298 34.2
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.1e-32 144.1 254 33.9
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 4.0e-31 139.8 293 33.4
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 9.6e-25 118.6 99 66.7
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.0e-15 86.7 129 41.1
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.7e-08 63.5 52 51.9


User provided reference genes

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