Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-63 246.5 124 100.0
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.3e-58 229.6 126 92.9
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 9.3e-52 206.8 125 86.4
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 2.1e-51 205.7 109 94.5
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 5.9e-46 187.6 109 87.2
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 3.2e-44 181.8 106 82.1
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 5.5e-44 181.0 106 82.1
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.2e-43 179.9 111 83.8
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.4e-42 176.4 103 84.5
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.4e-42 176.4 106 84.9
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 7.4e-41 170.6 106 80.2
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.1e-39 166.8 101 83.2
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.1e-36 156.8 100 82.0
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.7e-32 142.9 100 78.0
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.8e-32 142.1 105 72.4
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 2.6e-30 135.6 83 79.5
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 2.9e-29 132.1 103 66.0
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 2.5e-28 129.0 100 66.0
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 3.6e-27 125.2 96 65.6
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 8.0e-27 124.0 101 59.4
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.0e-26 123.6 100 63.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.3e-26 122.5 113 55.8
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.3e-26 122.5 115 56.5
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 2.3e-26 122.5 97 63.9
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 2.3e-26 122.5 72 76.4
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 3.0e-26 122.1 84 70.2
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 4.0e-26 121.7 98 63.3
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 6.7e-26 120.9 71 77.5
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 8.8e-26 120.6 103 59.2
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 8.8e-26 120.6 89 67.4
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.1e-25 120.2 90 65.6
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.0e-25 119.4 103 59.2
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 3.3e-25 118.6 91 62.6
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.3e-25 118.6 100 61.0
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 4.4e-25 118.2 76 69.7
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 4.4e-25 118.2 99 62.6
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 5.7e-25 117.9 92 64.1
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 7.5e-25 117.5 103 57.3
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 7.5e-25 117.5 104 57.7
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 9.7e-25 117.1 77 72.7
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 9.7e-25 117.1 103 58.3
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.3e-24 116.7 74 67.6
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.7e-24 116.3 100 59.0
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 1.7e-24 116.3 92 64.1
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 2.2e-24 115.9 104 61.5
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.8e-24 115.5 77 68.8
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 3.7e-24 115.2 92 60.9
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.7e-24 115.2 73 75.3
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 3.7e-24 115.2 98 60.2
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.7e-24 115.2 104 57.7
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 6.3e-24 114.4 96 63.5
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 6.3e-24 114.4 102 57.8
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 6.3e-24 114.4 91 63.7
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 6.3e-24 114.4 91 63.7
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 8.2e-24 114.0 57 86.0
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.1e-23 113.6 72 72.2
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.4e-23 113.2 59 79.7
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 1.4e-23 113.2 61 80.3
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.4e-23 113.2 100 60.0
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.8e-23 112.8 67 74.6
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 2.4e-23 112.5 98 58.2
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.4e-23 112.5 96 62.5
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 3.1e-23 112.1 85 64.7
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 4.1e-23 111.7 59 81.4
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 4.1e-23 111.7 87 58.6
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 5.3e-23 111.3 95 60.0
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 7.0e-23 110.9 61 78.7
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 7.0e-23 110.9 61 78.7
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 7.0e-23 110.9 96 61.5
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.6e-22 109.8 99 60.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.6e-22 109.8 93 61.3
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.6e-22 109.8 97 56.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 4.5e-22 108.2 71 66.2
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.5e-22 108.2 99 51.5
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 5.9e-22 107.8 101 53.5
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 5.9e-22 107.8 85 57.6
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.0e-21 107.1 95 58.9
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.0e-21 107.1 80 63.8
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.3e-21 106.7 98 58.2
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.7e-21 106.3 62 75.8
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 2.2e-21 105.9 77 66.2
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.2e-21 105.9 77 66.2
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 3.8e-21 105.1 89 55.1
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 6.5e-21 104.4 100 53.0
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 6.5e-21 104.4 100 53.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.5e-20 103.2 94 56.4
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 3.2e-20 102.1 60 73.3
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 4.2e-20 101.7 102 52.0
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 7.2e-20 100.9 100 50.0
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 7.2e-20 100.9 100 50.0
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 7.2e-20 100.9 86 54.7
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 7.2e-20 100.9 114 50.0
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 1.6e-19 99.8 95 53.7
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.0e-18 97.1 92 52.2
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.8e-18 96.3 100 51.0
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 2.3e-18 95.9 102 51.0
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 4.0e-18 95.1 95 49.5
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 5.2e-18 94.7 104 47.1
BcaC06g35377 Brassica carinata HOM05D007416 ORTHO05D009329 7.5e-17 90.9 106 50.0
BcaNung06837 Brassica carinata HOM05D007416 ORTHO05D009329 7.5e-17 90.9 106 50.0
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.5e-17 90.9 70 57.1
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.3e-16 90.1 67 64.2
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.8e-15 86.3 78 53.8
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 5.9e-14 81.3 99 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.8e-10 69.7 69 47.8


User provided reference genes

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