Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p74160 Brassica napus HOM05D006174 ORTHO05D007987 2.2e-27 124.8 59 100.0
BcaC09g50568 Brassica carinata HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
A01p18890 Brassica napus HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
A01p18900 Brassica napus HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
C01p23850 Brassica napus HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
BolC1t02330H Brassica oleracea HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
BraA01t01830Z Brassica rapa HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
BraA01t01831Z Brassica rapa HOM05D006174 ORTHO05D007987 2.8e-22 107.8 58 87.9
Sp5g32560 Schrenkiella parvula HOM05D006174 ORTHO05D007987 6.3e-22 106.7 58 87.9
BcaB05g25044 Brassica carinata HOM05D006174 ORTHO05D007987 1.4e-21 105.5 58 87.9
C03p74010 Brassica napus HOM05D006174 ORTHO05D007987 9.0e-21 102.8 56 87.5
CARHR070890 Cardamine hirsuta HOM05D006174 ORTHO05D007987 1.2e-20 102.4 58 86.2
AL2G37610 Arabidopsis lyrata HOM05D006174 ORTHO05D007987 3.4e-20 100.9 58 82.8
Carub.0002s2430 Capsella rubella HOM05D006174 ORTHO05D007987 4.5e-20 100.5 57 84.2
Thhalv10019853m.g Eutrema salsugineum HOM05D006174 ORTHO05D007987 5.9e-20 100.1 58 79.3
AT1G77405 Arabidopsis thaliana HOM05D006174 ORTHO05D007987 1.3e-19 99.0 58 81.0
THA.LOC104800212 Tarenaya hassleriana HOM05D006174 ORTHO05D007987 2.2e-19 98.2 58 79.3
Aa31LG4G7430 Aethionema arabicum HOM05D006174 ORTHO05D007987 8.5e-19 96.3 58 77.6
BcaC03g15734 Brassica carinata HOM05D006174 ORTHO05D007987 2.7e-17 91.3 54 85.2
Cfa018561 Carpinus fangiana HOM05D006174 ORTHO05D007987 1.5e-15 85.5 57 71.9
Haze_17519 Corylus avellana HOM05D006174 ORTHO05D007987 1.9e-15 85.1 57 70.2
Cpa.g.sc64.130 Carica papaya HOM05D006174 ORTHO05D007987 5.7e-15 83.6 57 71.9
COL.COLO4_03953 Corchorus olitorius HOM05D006174 ORTHO05D007987 9.7e-15 82.8 57 68.4
TWI34G0515 Tripterygium wilfordii HOM05D006174 ORTHO05D007987 2.8e-14 81.3 57 71.9
Potri.002G080300 Populus trichocarpa HOM05D006174 ORTHO05D007987 3.7e-14 80.9 52 75.0
Nitab4.5_0000111g0120 Nicotiana tabacum HOM05D006174 ORTHO05D007987 4.8e-14 80.5 57 66.7
Solyc08g029150.3 Solanum lycopersicum HOM05D006174 ORTHO05D007987 4.8e-14 80.5 57 66.7
Sopen08g010060 Solanum pennellii HOM05D006174 ORTHO05D007987 4.8e-14 80.5 57 66.7
QL09p033206 Quercus lobata HOM05D006174 ORTHO05D007987 6.3e-14 80.1 57 66.7
Dinv14652 Davidia involucrata HOM05D006174 ORTHO05D007987 8.2e-14 79.7 57 68.4
Duzib093G0805 Durio zibethinus HOM05D006174 ORTHO05D007987 8.2e-14 79.7 57 64.9
MD00G1030400 Malus domestica HOM05D006174 ORTHO05D007987 8.2e-14 79.7 57 66.7
CsaV3_5G026160 Cucumis sativus L. HOM05D006174 ORTHO05D007987 1.1e-13 79.3 58 63.8
Lsat_1_v5_gn_4_117540 Lactuca sativa HOM05D006174 ORTHO05D007987 1.1e-13 79.3 58 60.3
Actinidia21299 Actinidia chinensis HOM05D006174 ORTHO05D007987 1.8e-13 78.6 57 66.7
CAN.G1352.3 Capsicum annuum HOM05D006174 ORTHO05D007987 1.8e-13 78.6 57 64.9
FAN20G1065 Fragaria x ananassa HOM05D006174 ORTHO05D007987 2.4e-13 78.2 57 63.2
Nitab4.5_0005499g0020 Nicotiana tabacum HOM05D006174 ORTHO05D007987 2.4e-13 78.2 57 64.9
CiPaw.15G033800 Carya illinoinensis HOM05D006174 ORTHO05D007987 3.1e-13 77.8 57 66.7
Prupe.1G492400 Prunus persica HOM05D006174 ORTHO05D007987 4.1e-13 77.4 57 66.7
MELO3C025482.2 Cucumis melo HOM05D006174 ORTHO05D007987 5.3e-13 77.0 57 63.2
Sabra05G0137100 Salix brachista HOM05D006174 ORTHO05D007987 5.3e-13 77.0 52 69.2
PGR044G0496 Punica granatum HOM05D006174 ORTHO05D007987 6.9e-13 76.6 57 63.2
PGSC0003DMG400006019 Solanum tuberosum HOM05D006174 ORTHO05D007987 6.9e-13 76.6 57 63.2
Thecc.08G130300 Theobroma cacao HOM05D006174 ORTHO05D007987 6.9e-13 76.6 57 59.6
CANSAT56G3042 Cannabis sativa HOM05D006174 ORTHO05D007987 9.1e-13 76.3 57 64.9
ClCG11G015920 Citrullus lanatus HOM05D006174 ORTHO05D007987 9.1e-13 76.3 57 61.4
Gohir.A06G046700 Gossypium hirsutum HOM05D006174 ORTHO05D007987 9.1e-13 76.3 57 63.2
Gohir.D06G047100 Gossypium hirsutum HOM05D006174 ORTHO05D007987 9.1e-13 76.3 57 63.2
Gorai.010G052600 Gossypium raimondii HOM05D006174 ORTHO05D007987 9.1e-13 76.3 57 63.2
RcHm_v2.0_Chr4g0420811 Rosa chinensis HOM05D006174 ORTHO05D007987 9.1e-13 76.3 57 63.2
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.2e-12 75.9 42 88.1
FvH4_2g27550 Fragaria vesca HOM05D006174 ORTHO05D007987 1.2e-12 75.9 57 61.4
FAN15G2863 Fragaria x ananassa HOM05D006174 ORTHO05D007987 1.2e-12 75.9 57 61.4
FAN24G3105 Fragaria x ananassa HOM05D006174 ORTHO05D007987 1.2e-12 75.9 57 61.4
FAN27G1425 Fragaria x ananassa HOM05D006174 ORTHO05D007987 1.2e-12 75.9 57 59.6
CSS0047085 Camellia sinensis var. sinensis HOM05D006174 ORTHO05D007987 1.5e-12 75.5 57 61.4
Atru.chr13.1536 Acer truncatum HOM05D006174 ORTHO05D007987 2.6e-12 74.7 57 63.2
ECA232G2008 Erigeron canadensis HOM05D006174 ORTHO05D007987 2.6e-12 74.7 57 61.4
TAR336G0003 Trochodendron aralioides HOM05D006174 ORTHO05D007987 3.4e-12 74.3 57 64.9
Lj7C346T1 Lonicera japonica HOM05D006174 ORTHO05D007987 4.5e-12 73.9 52 69.2
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 7.7e-12 73.2 57 59.6
Manes.18G080300 Manihot esculenta HOM05D006174 ORTHO05D007987 1.3e-11 72.4 56 66.1
AUR62041512 Chenopodium quinoa HOM05D006174 ORTHO05D007987 1.7e-11 72.0 58 63.8
Sed0011313 Sechium edule HOM05D006174 ORTHO05D007987 1.7e-11 72.0 57 57.9
Aqoxy3G03207 Aquilegia oxysepala HOM05D006174 ORTHO05D007987 2.9e-11 71.2 59 57.6
Ciclev10003743m.g Citrus clementina HOM05D006174 ORTHO05D007987 2.9e-11 71.2 57 61.4
SalBow2G2495 Salvia bowleyana HOM05D006174 ORTHO05D007987 5.0e-11 70.5 57 57.9
Atru.chr13.1532 Acer truncatum HOM05D006174 ORTHO05D007987 6.5e-11 70.1 51 64.7
PSO832G2909 Papaver somniferum HOM05D006174 ORTHO05D007987 6.5e-11 70.1 58 58.6
Peaxi162Scf00310g00046 Petunia axillaris HOM05D006174 ORTHO05D007987 1.4e-10 68.9 57 56.1
GSVIVG01008474001 Vitis vinifera HOM05D006174 ORTHO05D007987 1.4e-10 68.9 44 72.7
Eucgr.F04334 Eucalyptus grandis HOM05D006174 ORTHO05D007987 2.5e-10 68.2 57 57.9
Lalb_Chr17g0343621 Lupinus albus HOM05D006174 ORTHO05D007987 2.5e-10 68.2 57 54.4
Nn2g10369 Nelumbo nucifera HOM05D006174 ORTHO05D007987 2.5e-10 68.2 45 68.9
Phvul.001G090600 Phaseolus vulgaris HOM05D006174 ORTHO05D007987 2.5e-10 68.2 57 56.1
AUR62031996 Chenopodium quinoa HOM05D006174 ORTHO05D007987 4.2e-10 67.4 58 58.6
Oeu001538.1 Olea europaea HOM05D006174 ORTHO05D007987 5.5e-10 67.0 57 54.4
HanXRQChr11g0326181 Helianthus annuus HOM05D006174 ORTHO05D007987 7.2e-10 66.6 65 50.8
Nn8g40873 Nelumbo nucifera HOM05D006174 ORTHO05D007987 1.2e-09 65.9 57 57.9
SGA_v2.0_scaffold75G24945 Striga asiatica HOM05D006174 ORTHO05D007987 1.2e-09 65.9 57 54.4
arahy.Tifrunner.gnm1.ann1.9UW3CC Arachis hypogaea HOM05D006174 ORTHO05D007987 2.1e-09 65.1 57 54.4
Migut.N03269 Erythranthe guttata HOM05D006174 ORTHO05D007987 2.1e-09 65.1 56 55.4
arahy.Tifrunner.gnm1.ann1.I3T0B4 Arachis hypogaea HOM05D006174 ORTHO05D007987 3.6e-09 64.3 57 52.6
Lj1g0022003 Lotus japonicus HOM05D006174 ORTHO05D007987 3.6e-09 64.3 57 54.4
DCAR_014377 Daucus carota HOM05D006174 ORTHO05D007987 4.7e-09 63.9 53 58.5
Nn7g36521 Nelumbo nucifera HOM05D006174 ORTHO05D007987 6.1e-09 63.5 45 66.7
VMungo1080G1789 Vigna mungo HOM05D006174 ORTHO05D007987 7.9e-09 63.2 57 52.6
ATR0751G052 Amborella trichopoda HOM05D006174 ORTHO05D007987 1.4e-08 62.4 57 49.1
Ah.12g055480 Amaranthus hybridus HOM05D006174 ORTHO05D007987 1.8e-08 62.0 58 60.3
Glyma.19G099200 Glycine max HOM05D006174 ORTHO05D007987 1.8e-08 62.0 57 50.9
EL10Ac5g12247 Beta vulgaris HOM05D006174 ORTHO05D007987 2.3e-08 61.6 59 55.9
vmacro17639 Vaccinium macrocarpon HOM05D006174 ORTHO05D007987 2.3e-08 61.6 57 52.6
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 8.8e-08 59.7 57 49.1
BcaC05g26907 Brassica carinata HOM05D029137 ORTHO05D027653 3.3e-07 57.8 37 70.3
SGA_v2.0_scaffold154G37183 Striga asiatica HOM05D006174 ORTHO05D007987 3.3e-07 57.8 51 51.0
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 5.7e-07 57.0 56 55.4
Sc14g0003020 Simmondsia chinensis HOM05D006174 ORTHO05D007987 1.7e-06 55.5 54 51.9


User provided reference genes

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