Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p73990 Brassica napus HOM05D000555 ORTHO05D018464 1.1e-32 142.9 80 100.0
BcaC01g01606 Brassica carinata HOM05D000555 ORTHO05D018464 8.2e-25 116.7 64 100.0
C03p74130 Brassica napus HOM05D000555 ORTHO05D018464 3.1e-24 114.8 63 98.4
BolC3t19676H Brassica oleracea HOM05D000555 ORTHO05D018464 4.1e-24 114.4 62 100.0
BcaB05g25062 Brassica carinata HOM05D000555 ORTHO05D001906 2.0e-23 112.1 63 96.8
C03p73930 Brassica napus HOM05D000313 ORTHO05D018464 2.6e-23 111.7 61 98.4
A02p21430 Brassica napus HOM05D000555 ORTHO05D001906 5.9e-23 110.5 63 95.2
BraA02t07153Z Brassica rapa HOM05D000555 ORTHO05D001906 1.4e-21 105.9 63 93.7
Sp5g32750 Schrenkiella parvula HOM05D000555 ORTHO05D001906 3.2e-21 104.8 63 90.5
Thhalv10018009m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 2.1e-20 102.1 63 87.3
BolC2t09500H Brassica oleracea HOM05D000555 ORTHO05D001906 7.9e-20 100.1 63 88.9
C02p34810 Brassica napus HOM05D000555 ORTHO05D001906 8.8e-19 96.7 63 85.7
BcaC03g15748 Brassica carinata HOM05D000555 ORTHO05D001906 1.5e-18 95.9 63 85.7
Aa31LG4G7710 Aethionema arabicum HOM05D000555 ORTHO05D001906 4.8e-17 90.9 63 79.4
CARHR071110 Cardamine hirsuta HOM05D000555 ORTHO05D001906 1.4e-16 89.4 63 77.8
Carub.0002s2449 Capsella rubella HOM05D000555 ORTHO05D001906 3.8e-14 81.3 63 74.6
AL142U10010 Arabidopsis lyrata HOM05D000555 ORTHO05D018464 5.5e-13 77.4 63 71.4
AL2G37810 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 5.5e-13 77.4 63 71.4
AT1G77600 Arabidopsis thaliana HOM05D000555 ORTHO05D001906 3.6e-12 74.7 63 68.3
Potri.002G084300 Populus trichocarpa HOM05D000555 ORTHO05D001906 3.7e-09 64.7 59 62.7
Duzib116G0370 Durio zibethinus HOM05D000555 ORTHO05D001906 1.1e-08 63.2 58 60.3
Sabra02G0065900 Salix brachista HOM05D000555 ORTHO05D001906 1.4e-08 62.8 59 59.3
Gohir.D01G180700 Gossypium hirsutum HOM05D000555 ORTHO05D001906 2.4e-08 62.0 58 56.9
Gorai.002G221900 Gossypium raimondii HOM05D000555 ORTHO05D001906 2.4e-08 62.0 58 56.9
Atru.chr13.1458 Acer truncatum HOM05D000555 ORTHO05D001906 3.1e-08 61.6 55 60.0
Atru.chr13.1481 Acer truncatum HOM05D000555 ORTHO05D001906 3.1e-08 61.6 55 60.0
Gohir.A01G188800 Gossypium hirsutum HOM05D000555 ORTHO05D001906 3.1e-08 61.6 58 56.9
Eucgr.F03787 Eucalyptus grandis HOM05D000555 ORTHO05D001906 2.7e-07 58.5 63 47.6
Ciclev10003517m.g Citrus clementina HOM05D000555 ORTHO05D001906 5.9e-07 57.4 63 54.0
Manes.18G076700 Manihot esculenta HOM05D000555 ORTHO05D001906 1.7e-06 55.8 57 56.1
Cpa.g.sc36.61 Carica papaya HOM05D000555 ORTHO05D001906 2.2e-06 55.5 61 50.8


User provided reference genes

Program Settings