Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p73980 Brassica napus HOM05D000555 ORTHO05D018464 2.5e-34 148.3 79 100.0
BcaC01g01607 Brassica carinata HOM05D000555 ORTHO05D018464 1.2e-23 112.8 81 79.0
BraA02t07153Z Brassica rapa HOM05D000555 ORTHO05D001906 2.2e-22 108.6 62 93.5
BcaC03g15748 Brassica carinata HOM05D000555 ORTHO05D001906 4.9e-22 107.5 62 91.9
C02p34810 Brassica napus HOM05D000555 ORTHO05D001906 4.9e-22 107.5 62 91.9
BolC2t09500H Brassica oleracea HOM05D000555 ORTHO05D001906 4.2e-21 104.4 62 90.3
BcaB05g25062 Brassica carinata HOM05D000555 ORTHO05D001906 5.4e-21 104.0 62 88.7
A02p21430 Brassica napus HOM05D000555 ORTHO05D001906 5.4e-21 104.0 62 88.7
Sp5g32750 Schrenkiella parvula HOM05D000555 ORTHO05D001906 1.3e-17 92.8 62 80.6
CARHR071110 Cardamine hirsuta HOM05D000555 ORTHO05D001906 1.1e-16 89.7 61 75.4
AL2G37810 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 3.8e-14 81.3 62 69.4
AT1G77600 Arabidopsis thaliana HOM05D000555 ORTHO05D001906 8.4e-14 80.1 62 67.7
Carub.0002s2449 Capsella rubella HOM05D000555 ORTHO05D001906 7.1e-13 77.0 62 66.1
Aa31LG4G7710 Aethionema arabicum HOM05D000555 ORTHO05D001906 1.3e-11 72.8 62 66.1
C03p73960 Brassica napus HOM05D000555 ORTHO05D098193 1.4e-08 62.8 45 77.8
Thhalv10018009m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 2.6e-07 58.5 37 83.8


User provided reference genes

Program Settings