Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p73970 Brassica napus HOM05D006174 ORTHO05D027324 6.1e-67 257.3 125 100.0
C03p74000 Brassica napus HOM05D006174 ORTHO05D027324 1.1e-65 253.1 125 98.4
C03p73930 Brassica napus HOM05D000313 ORTHO05D018464 1.3e-64 249.6 121 99.2
BolC3t19678H Brassica oleracea HOM05D006174 ORTHO05D007987 1.0e-42 176.8 85 98.8
BcaC03g15734 Brassica carinata HOM05D006174 ORTHO05D007987 3.1e-39 165.2 109 79.8
BcaC09g50568 Brassica carinata HOM05D006174 ORTHO05D007987 1.3e-32 143.3 120 64.2
C01p23850 Brassica napus HOM05D006174 ORTHO05D007987 1.3e-32 143.3 120 64.2
BolC1t02330H Brassica oleracea HOM05D006174 ORTHO05D007987 1.3e-32 143.3 120 64.2
BcaB05g25044 Brassica carinata HOM05D006174 ORTHO05D007987 1.7e-32 142.9 120 63.3
AL2G37610 Arabidopsis lyrata HOM05D006174 ORTHO05D007987 4.1e-31 138.3 120 61.7
BraA01t01831Z Brassica rapa HOM05D006174 ORTHO05D007987 4.1e-31 138.3 120 62.5
CARHR070890 Cardamine hirsuta HOM05D006174 ORTHO05D007987 4.1e-31 138.3 120 61.7
Thhalv10019853m.g Eutrema salsugineum HOM05D006174 ORTHO05D007987 4.1e-31 138.3 120 61.7
A01p18900 Brassica napus HOM05D006174 ORTHO05D007987 5.4e-31 137.9 120 61.7
AT1G77405 Arabidopsis thaliana HOM05D006174 ORTHO05D007987 9.2e-31 137.1 120 60.8
Carub.0002s2430 Capsella rubella HOM05D006174 ORTHO05D007987 1.6e-30 136.3 120 60.8
Sp5g32560 Schrenkiella parvula HOM05D006174 ORTHO05D007987 2.7e-30 135.6 120 60.0
Aa31LG4G7430 Aethionema arabicum HOM05D006174 ORTHO05D007987 1.0e-29 133.7 120 59.2
BcaC01g01605 Brassica carinata HOM05D006174 ORTHO05D027324 1.0e-29 133.7 105 65.7
Atru.chr13.1536 Acer truncatum HOM05D006174 ORTHO05D007987 5.0e-29 131.3 134 53.0
Eucgr.F04334 Eucalyptus grandis HOM05D006174 ORTHO05D007987 5.0e-29 131.3 123 53.7
Dinv14652 Davidia involucrata HOM05D006174 ORTHO05D007987 2.5e-28 129.0 124 52.4
Aqoxy3G03207 Aquilegia oxysepala HOM05D006174 ORTHO05D007987 5.6e-28 127.9 124 53.2
THA.LOC104800212 Tarenaya hassleriana HOM05D006174 ORTHO05D007987 5.6e-28 127.9 124 52.4
PGR044G0496 Punica granatum HOM05D006174 ORTHO05D007987 6.1e-27 124.4 124 51.6
Rhsim08G0141900 Rhododendron simsii HOM05D006174 ORTHO05D007987 2.3e-26 122.5 118 56.8
CANSAT56G3042 Cannabis sativa HOM05D006174 ORTHO05D007987 8.9e-26 120.6 124 52.4
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 8.9e-26 120.6 124 50.8
Thecc.08G130300 Theobroma cacao HOM05D006174 ORTHO05D007987 1.5e-25 119.8 124 49.2
EL10Ac5g12247 Beta vulgaris HOM05D006174 ORTHO05D007987 2.6e-25 119.0 119 52.1
TAR336G0003 Trochodendron aralioides HOM05D006174 ORTHO05D007987 4.4e-25 118.2 124 50.0
Lalb_Chr17g0343621 Lupinus albus HOM05D006174 ORTHO05D007987 1.3e-24 116.7 119 49.6
Sed0011313 Sechium edule HOM05D006174 ORTHO05D007987 1.3e-24 116.7 124 50.0
FAN27G1425 Fragaria x ananassa HOM05D006174 ORTHO05D007987 2.2e-24 115.9 123 50.4
HanXRQChr11g0326181 Helianthus annuus HOM05D006174 ORTHO05D007987 2.2e-24 115.9 123 47.2
vmacro17639 Vaccinium macrocarpon HOM05D006174 ORTHO05D007987 2.2e-24 115.9 134 47.8
CiPaw.15G033800 Carya illinoinensis HOM05D006174 ORTHO05D007987 2.9e-24 115.5 124 50.0
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 2.9e-24 115.5 134 48.5
CAN.G1352.3 Capsicum annuum HOM05D006174 ORTHO05D007987 3.7e-24 115.2 125 50.4
CAN.G1352.7 Capsicum annuum HOM05D006174 ORTHO05D007987 3.7e-24 115.2 125 50.4
PGSC0003DMG400014838 Solanum tuberosum HOM05D006174 ORTHO05D007987 3.7e-24 115.2 125 50.4
Solyc08g029150.3 Solanum lycopersicum HOM05D006174 ORTHO05D007987 4.9e-24 114.8 124 50.0
Sopen08g010060 Solanum pennellii HOM05D006174 ORTHO05D007987 4.9e-24 114.8 124 50.0
Oeu001538.1 Olea europaea HOM05D006174 ORTHO05D007987 8.3e-24 114.0 123 48.8
AUR62041512 Chenopodium quinoa HOM05D006174 ORTHO05D007987 1.1e-23 113.6 119 48.7
Actinidia21299 Actinidia chinensis HOM05D006174 ORTHO05D007987 1.4e-23 113.2 124 48.4
CSS0047085 Camellia sinensis var. sinensis HOM05D006174 ORTHO05D007987 1.4e-23 113.2 124 49.2
AUR62031996 Chenopodium quinoa HOM05D006174 ORTHO05D007987 1.4e-23 113.2 119 48.7
MELO3C025482.2 Cucumis melo HOM05D006174 ORTHO05D007987 1.4e-23 113.2 124 48.4
ATR0751G052 Amborella trichopoda HOM05D006174 ORTHO05D007987 2.4e-23 112.5 120 52.5
Actinidia28258 Actinidia chinensis HOM05D006174 ORTHO05D007987 3.2e-23 112.1 124 48.4
FAN24G3105 Fragaria x ananassa HOM05D006174 ORTHO05D007987 3.2e-23 112.1 123 48.8
PSO832G2909 Papaver somniferum HOM05D006174 ORTHO05D007987 3.2e-23 112.1 124 49.2
Prupe.1G492400 Prunus persica HOM05D006174 ORTHO05D007987 4.1e-23 111.7 123 49.6
SGA_v2.0_scaffold154G37185 Striga asiatica HOM05D006174 ORTHO05D007987 4.1e-23 111.7 108 55.6
PGSC0003DMG400029178 Solanum tuberosum HOM05D006174 ORTHO05D007987 5.4e-23 111.3 125 48.8
HPP92_023516 Vanilla planifolia HOM05D006174 ORTHO05D007987 5.4e-23 111.3 124 46.0
Gohir.D06G047100 Gossypium hirsutum HOM05D006174 ORTHO05D007987 9.2e-23 110.5 125 47.2
Gorai.010G052600 Gossypium raimondii HOM05D006174 ORTHO05D007987 9.2e-23 110.5 125 47.2
DCAR_014377 Daucus carota HOM05D006174 ORTHO05D007987 1.2e-22 110.2 123 45.5
Cpa.g.sc64.130 Carica papaya HOM05D006174 ORTHO05D007987 1.6e-22 109.8 123 47.2
Gohir.A06G046700 Gossypium hirsutum HOM05D006174 ORTHO05D007987 1.6e-22 109.8 125 47.2
Migut.N03269 Erythranthe guttata HOM05D006174 ORTHO05D007987 2.0e-22 109.4 122 47.5
PGSC0003DMG400006019 Solanum tuberosum HOM05D006174 ORTHO05D007987 2.0e-22 109.4 125 48.0
VMungo1080G1789 Vigna mungo HOM05D006174 ORTHO05D007987 2.0e-22 109.4 130 48.5
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.7e-22 109.0 124 47.6
ClCG11G015920 Citrullus lanatus HOM05D006174 ORTHO05D007987 2.7e-22 109.0 124 48.4
HPP92_023560 Vanilla planifolia HOM05D006174 ORTHO05D007987 2.7e-22 109.0 124 46.0
Phvul.001G090600 Phaseolus vulgaris HOM05D006174 ORTHO05D007987 3.5e-22 108.6 121 47.9
Cfa018561 Carpinus fangiana HOM05D006174 ORTHO05D007987 4.6e-22 108.2 124 47.6
Duzib093G0805 Durio zibethinus HOM05D006174 ORTHO05D007987 7.8e-22 107.5 124 46.0
Nn2g10369 Nelumbo nucifera HOM05D006174 ORTHO05D007987 7.8e-22 107.5 124 45.2
Ciclev10003743m.g Citrus clementina HOM05D006174 ORTHO05D007987 1.0e-21 107.1 120 48.3
CsaV3_5G026160 Cucumis sativus L. HOM05D006174 ORTHO05D007987 1.0e-21 107.1 124 46.8
Manes.18G080300 Manihot esculenta HOM05D006174 ORTHO05D007987 1.0e-21 107.1 123 46.3
Nn8g40873 Nelumbo nucifera HOM05D006174 ORTHO05D007987 1.0e-21 107.1 120 46.7
Sc14g0003020 Simmondsia chinensis HOM05D006174 ORTHO05D007987 1.0e-21 107.1 119 48.7
RcHm_v2.0_Chr4g0420811 Rosa chinensis HOM05D006174 ORTHO05D007987 1.3e-21 106.7 133 46.6
C03p74150 Brassica napus HOM05D006174 ORTHO05D007987 2.3e-21 105.9 55 90.9
ECA232G2008 Erigeron canadensis HOM05D006174 ORTHO05D007987 3.0e-21 105.5 123 45.5
SGA_v2.0_scaffold75G24945 Striga asiatica HOM05D006174 ORTHO05D007987 3.9e-21 105.1 117 48.7
SalBow2G2495 Salvia bowleyana HOM05D006174 ORTHO05D007987 5.0e-21 104.8 124 45.2
SHI21567 Sapria himalayana HOM05D006174 ORTHO05D007987 5.0e-21 104.8 120 45.8
TWI34G0515 Tripterygium wilfordii HOM05D006174 ORTHO05D007987 6.6e-21 104.4 120 47.5
Nitab4.5_0000111g0120 Nicotiana tabacum HOM05D006174 ORTHO05D007987 8.6e-21 104.0 124 47.6
Peaxi162Scf00310g00046 Petunia axillaris HOM05D006174 ORTHO05D007987 1.1e-20 103.6 123 46.3
Cc10_g12420 Coffea canephora HOM05D006174 ORTHO05D007987 1.5e-20 103.2 122 43.4
MD00G1030400 Malus domestica HOM05D006174 ORTHO05D007987 1.5e-20 103.2 123 45.5
FAN20G1065 Fragaria x ananassa HOM05D006174 ORTHO05D007987 1.9e-20 102.8 123 45.5
Nitab4.5_0005499g0020 Nicotiana tabacum HOM05D006174 ORTHO05D007987 2.5e-20 102.4 124 46.0
FvH4_2g27550 Fragaria vesca HOM05D006174 ORTHO05D007987 3.3e-20 102.1 123 46.3
FAN15G2863 Fragaria x ananassa HOM05D006174 ORTHO05D007987 3.3e-20 102.1 123 46.3
Glyma.16G052400 Glycine max HOM05D006174 ORTHO05D007987 3.3e-20 102.1 121 47.9
QL09p033332 Quercus lobata HOM05D006174 ORTHO05D007987 3.3e-20 102.1 134 44.8
arahy.Tifrunner.gnm1.ann1.9UW3CC Arachis hypogaea HOM05D006174 ORTHO05D007987 5.6e-20 101.3 122 44.3
arahy.Tifrunner.gnm1.ann1.I3T0B4 Arachis hypogaea HOM05D006174 ORTHO05D007987 9.5e-20 100.5 119 45.4
C03p74140 Brassica napus HOM05D006174 ORTHO05D027324 1.2e-19 100.1 108 59.3
QL09p033206 Quercus lobata HOM05D006174 ORTHO05D007987 1.2e-19 100.1 134 44.0
Glyma.19G099200 Glycine max HOM05D006174 ORTHO05D007987 1.6e-19 99.8 119 47.1
Lj1g0022003 Lotus japonicus HOM05D006174 ORTHO05D007987 1.6e-19 99.8 119 46.2
Medtr3g108060 Medicago truncatula HOM05D006174 ORTHO05D007987 1.6e-19 99.8 125 45.6
Ah.12g055480 Amaranthus hybridus HOM05D006174 ORTHO05D007987 8.0e-19 97.4 122 44.3
Lsat_1_v5_gn_4_117540 Lactuca sativa HOM05D006174 ORTHO05D007987 1.4e-18 96.7 124 42.7
Nn7g36521 Nelumbo nucifera HOM05D006174 ORTHO05D007987 4.0e-18 95.1 124 41.9
Sabra02G0062800 Salix brachista HOM05D006174 ORTHO05D007987 8.9e-18 94.0 130 43.8
EL10Ac3g06597 Beta vulgaris HOM05D006174 ORTHO05D007987 1.5e-17 93.2 129 41.9
arahy.Tifrunner.gnm1.ann1.DV4E2P Arachis hypogaea HOM05D006174 ORTHO05D007987 7.5e-17 90.9 119 41.2
TPR.G8620 Trifolium pratense HOM05D006174 ORTHO05D007987 1.3e-16 90.1 124 41.9
Psat1g032920 Pisum sativum HOM05D006174 ORTHO05D007987 2.2e-16 89.4 124 41.1
Zm00001eb056380 Zea mays HOM05D006174 ORTHO05D007987 1.9e-15 86.3 125 40.8
Ca_25317_v3 Cicer arietinum L. HOM05D006174 ORTHO05D007987 4.1e-15 85.1 50 72.0
Os03g0736200 Oryza sativa ssp. japonica HOM05D006174 ORTHO05D007987 1.2e-14 83.6 125 40.0
Lj7C346T1 Lonicera japonica HOM05D006174 ORTHO05D007987 6.6e-13 77.8 104 44.2
CAN.G1503.13 Capsicum annuum HOM05D006174 ORTHO05D007987 1.1e-12 77.0 112 46.4
Potri.002G080300 Populus trichocarpa HOM05D006174 ORTHO05D007987 1.6e-11 73.2 120 38.3
Sabra05G0137100 Salix brachista HOM05D006174 ORTHO05D007987 3.6e-11 72.0 120 39.2
GSVIVG01008474001 Vitis vinifera HOM05D006174 ORTHO05D007987 5.2e-10 68.2 113 35.4
SEGI_34053 Sequoiadendron giganteum HOM05D006174 ORTHO05D007987 1.5e-09 66.6 54 55.6
PSO732G0362 Papaver somniferum HOM05D010315 ORTHO05D016663 3.5e-06 55.5 54 40.7


User provided reference genes

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