Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p73810 Brassica napus HOM05D005715 ORTHO05D007160 9.0e-39 162.9 72 100.0
A08p26250 Brassica napus HOM05D005715 ORTHO05D007160 4.6e-35 150.6 93 77.4
C03p74190 Brassica napus HOM05D005715 ORTHO05D007160 1.3e-34 149.1 93 76.3
BraA08t34576Z Brassica rapa HOM05D005715 ORTHO05D007160 1.3e-34 149.1 93 76.3
BcaC01g01609 Brassica carinata HOM05D005715 ORTHO05D007160 1.1e-33 146.0 93 74.2
BcaC01g01604 Brassica carinata HOM05D005715 ORTHO05D007160 4.3e-33 144.1 93 74.2
BcaC01g06948 Brassica carinata HOM05D005715 ORTHO05D007160 2.9e-29 131.3 92 67.4
Sp1g23710 Schrenkiella parvula HOM05D005715 ORTHO05D007160 7.1e-28 126.7 91 65.9
Thhalv10009308m.g Eutrema salsugineum HOM05D005715 ORTHO05D007160 1.6e-27 125.6 92 65.2
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 4.3e-25 117.5 83 66.3
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 2.1e-24 115.2 83 65.1
BcaC05g26566 Brassica carinata HOM05D005715 ORTHO05D007160 2.8e-24 114.8 83 63.9
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 2.8e-24 114.8 83 65.1
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 2.8e-24 114.8 83 63.9
Carub.0001s2602 Capsella rubella HOM05D005715 ORTHO05D007160 4.8e-24 114.0 97 57.7
AL1G40890 Arabidopsis lyrata HOM05D005715 ORTHO05D007160 1.3e-21 105.9 97 54.6
AT1G27461 Arabidopsis thaliana HOM05D005715 ORTHO05D007160 1.3e-21 105.9 83 60.2
Aa31LG7G10200 Aethionema arabicum HOM05D005715 ORTHO05D007160 5.0e-21 104.0 84 57.1
CARHR027070 Cardamine hirsuta HOM05D005715 ORTHO05D007160 1.1e-20 102.8 98 53.1
Thecc.08G087700 Theobroma cacao HOM05D005715 ORTHO05D007160 2.2e-16 88.6 102 44.1
Actinidia10205 Actinidia chinensis HOM05D005715 ORTHO05D007160 3.7e-16 87.8 96 46.9
Cfa013768 Carpinus fangiana HOM05D005715 ORTHO05D007160 4.8e-16 87.4 94 45.7
Manes.18G047200 Manihot esculenta HOM05D005715 ORTHO05D007160 6.3e-16 87.0 102 43.1
RcHm_v2.0_Chr6g0309781 Rosa chinensis HOM05D005715 ORTHO05D007160 8.2e-16 86.7 93 47.3
CANSAT25G3138 Cannabis sativa HOM05D005715 ORTHO05D007160 1.4e-15 85.9 105 43.8
COL.COLO4_28493 Corchorus olitorius HOM05D005715 ORTHO05D007160 1.4e-15 85.9 100 46.0
CiPaw.08G050600 Carya illinoinensis HOM05D005715 ORTHO05D007160 1.8e-15 85.5 101 45.5
Ciclev10001560m.g Citrus clementina HOM05D005715 ORTHO05D007160 1.8e-15 85.5 92 45.7
QL05p065482 Quercus lobata HOM05D005715 ORTHO05D007160 1.8e-15 85.5 100 44.0
QL12p038205 Quercus lobata HOM05D005715 ORTHO05D007160 1.8e-15 85.5 100 44.0
Duzib093G0740 Durio zibethinus HOM05D005715 ORTHO05D007160 3.1e-15 84.7 97 43.3
FvH4_2g32940 Fragaria vesca HOM05D005715 ORTHO05D007160 3.1e-15 84.7 91 46.2
FAN15G0086 Fragaria x ananassa HOM05D005715 ORTHO05D007160 3.1e-15 84.7 91 46.2
FAN20G0332 Fragaria x ananassa HOM05D005715 ORTHO05D007160 3.1e-15 84.7 91 46.2
FAN24G0894 Fragaria x ananassa HOM05D005715 ORTHO05D007160 3.1e-15 84.7 91 46.2
FAN27G0384 Fragaria x ananassa HOM05D005715 ORTHO05D007160 3.1e-15 84.7 91 46.2
Cpa.g.sc142.38 Carica papaya HOM05D005715 ORTHO05D007160 1.2e-14 82.8 87 46.0
CSS0034937 Camellia sinensis var. sinensis HOM05D005715 ORTHO05D007160 1.5e-14 82.4 90 45.6
CSS0039747 Camellia sinensis var. sinensis HOM05D005715 ORTHO05D007160 1.5e-14 82.4 90 45.6
Haze_22425 Corylus avellana HOM05D005715 ORTHO05D007160 2.6e-14 81.6 90 44.4
MD08G1080800 Malus domestica HOM05D005715 ORTHO05D007160 2.6e-14 81.6 96 42.7
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 4.5e-14 80.9 61 65.6
Prupe.1G421700 Prunus persica HOM05D005715 ORTHO05D007160 5.9e-14 80.5 98 41.8
THA.LOC104825172 Tarenaya hassleriana HOM05D005715 ORTHO05D007160 7.7e-14 80.1 98 41.8
VMungo0647G0294 Vigna mungo HOM05D005715 ORTHO05D007160 1.0e-13 79.7 100 41.0
Gohir.A06G024500 Gossypium hirsutum HOM05D005715 ORTHO05D007160 1.7e-13 79.0 87 47.1
Gohir.D06G021600 Gossypium hirsutum HOM05D005715 ORTHO05D007160 1.7e-13 79.0 87 47.1
Gorai.010G026200 Gossypium raimondii HOM05D005715 ORTHO05D007160 1.7e-13 79.0 87 47.1
Lalb_Chr22g0355691 Lupinus albus HOM05D005715 ORTHO05D007160 1.7e-13 79.0 108 39.8
Phvul.001G028500 Phaseolus vulgaris HOM05D005715 ORTHO05D007160 3.8e-13 77.8 101 42.6
Sabra02G0092400 Salix brachista HOM05D005715 ORTHO05D007160 3.8e-13 77.8 102 38.2
Dinv44948 Davidia involucrata HOM05D005715 ORTHO05D007160 5.0e-13 77.4 97 41.2
Potri.002G117700 Populus trichocarpa HOM05D005715 ORTHO05D007160 1.1e-12 76.3 102 38.2
CsaV3_4G035110 Cucumis sativus L. HOM05D005715 ORTHO05D007160 1.9e-12 75.5 100 43.0
Rhsim06G0062800 Rhododendron simsii HOM05D005715 ORTHO05D007160 1.9e-12 75.5 87 48.3
Gohir.D05G214000 Gossypium hirsutum HOM05D005715 ORTHO05D007160 2.5e-12 75.1 89 43.8
MELO3C016824.2 Cucumis melo HOM05D005715 ORTHO05D007160 3.2e-12 74.7 91 46.2
Lj1g0016682 Lotus japonicus HOM05D005715 ORTHO05D007160 3.2e-12 74.7 89 42.7
PSO541G4157 Papaver somniferum HOM05D005715 ORTHO05D007160 4.2e-12 74.3 89 43.8
Glyma.14G089033 Glycine max HOM05D005715 ORTHO05D007160 5.5e-12 73.9 103 42.7
Gorai.009G220700 Gossypium raimondii HOM05D005715 ORTHO05D007160 5.5e-12 73.9 89 42.7
Lj5g0027881 Lotus japonicus HOM05D005715 ORTHO05D007160 5.5e-12 73.9 96 43.8
ClCG05G020660 Citrullus lanatus HOM05D005715 ORTHO05D007160 7.2e-12 73.6 93 43.0
THA.LOC104825782 Tarenaya hassleriana HOM05D005715 ORTHO05D007160 7.2e-12 73.6 97 42.3
Psat6g017920 Pisum sativum HOM05D005715 ORTHO05D007160 9.4e-12 73.2 100 43.0
Gohir.A05G210700 Gossypium hirsutum HOM05D005715 ORTHO05D007160 1.2e-11 72.8 89 42.7
Medtr1g017920 Medicago truncatula HOM05D005715 ORTHO05D007160 1.2e-11 72.8 98 43.9
Potri.014G015300 Populus trichocarpa HOM05D005715 ORTHO05D007160 1.2e-11 72.8 95 40.0
AUR62037422 Chenopodium quinoa HOM05D005715 ORTHO05D007160 2.1e-11 72.0 79 44.3
Dinv39217 Davidia involucrata HOM05D005715 ORTHO05D007160 3.6e-11 71.2 85 42.4
Glyma.17G234300 Glycine max HOM05D005715 ORTHO05D007160 3.6e-11 71.2 102 40.2
Nn5g30612 Nelumbo nucifera HOM05D005715 ORTHO05D007160 3.6e-11 71.2 100 39.0
PSO675G4043 Papaver somniferum HOM05D005715 ORTHO05D007160 4.6e-11 70.9 89 42.7
TPR.G825 Trifolium pratense HOM05D005715 ORTHO05D007160 4.6e-11 70.9 101 42.6
Lalb_Chr14g0368141 Lupinus albus HOM05D005715 ORTHO05D007160 6.1e-11 70.5 99 38.4
Nn1g04537 Nelumbo nucifera HOM05D005715 ORTHO05D007160 1.0e-10 69.7 100 40.0
Solyc04g077740.1 Solanum lycopersicum HOM05D005715 ORTHO05D007160 1.0e-10 69.7 90 44.4
Lj4C71T16 Lonicera japonica HOM05D005715 ORTHO05D007160 1.4e-10 69.3 88 40.9
Sed0010783 Sechium edule HOM05D005715 ORTHO05D007160 1.4e-10 69.3 94 42.6
Sopen04g031360 Solanum pennellii HOM05D005715 ORTHO05D007160 1.4e-10 69.3 90 44.4
EL10Ac1g02368 Beta vulgaris HOM05D005715 ORTHO05D007160 1.8e-10 68.9 81 42.0
Eucgr.F02242 Eucalyptus grandis HOM05D005715 ORTHO05D007160 1.8e-10 68.9 90 40.0
PGR031G1686 Punica granatum HOM05D005715 ORTHO05D007160 1.8e-10 68.9 93 41.9
Sed0026939 Sechium edule HOM05D005715 ORTHO05D007160 1.8e-10 68.9 89 39.3
Sc02g0007950 Simmondsia chinensis HOM05D005715 ORTHO05D007160 2.3e-10 68.6 78 46.2
PGSC0003DMG400010622 Solanum tuberosum HOM05D005715 ORTHO05D007160 2.3e-10 68.6 86 45.3
CAN.G724.34 Capsicum annuum HOM05D005715 ORTHO05D007160 3.0e-10 68.2 91 42.9
Nitab4.5_0000497g0110 Nicotiana tabacum HOM05D005715 ORTHO05D007160 3.9e-10 67.8 85 44.7
Ah.05g167050 Amaranthus hybridus HOM05D005715 ORTHO05D007160 5.1e-10 67.4 80 45.0
AUR62022469 Chenopodium quinoa HOM05D005715 ORTHO05D007160 5.1e-10 67.4 79 41.8
Hma1.2p1_0819F.1_g223600 Hydrangea macrophylla HOM05D005715 ORTHO05D007160 5.1e-10 67.4 102 37.3
MBI16_g02456_MAGBIO Magnolia biondii HOM05D005715 ORTHO05D007160 5.1e-10 67.4 88 38.6
Oeu053093.1 Olea europaea HOM05D005715 ORTHO05D007160 5.1e-10 67.4 86 40.7
TWI12G0318 Tripterygium wilfordii HOM05D005715 ORTHO05D007160 5.1e-10 67.4 101 34.7
Os07g0585700 Oryza sativa ssp. japonica HOM05D005715 ORTHO05D007160 6.7e-10 67.0 91 38.5
TAR628G0320 Trochodendron aralioides HOM05D005715 ORTHO05D007160 6.7e-10 67.0 88 39.8
Nitab4.5_0003725g0050 Nicotiana tabacum HOM05D005715 ORTHO05D007160 1.1e-09 66.2 85 43.5
TWI56G0918 Tripterygium wilfordii HOM05D005715 ORTHO05D007160 1.1e-09 66.2 91 40.7
Hma1.2p1_3250F.1_g334460 Hydrangea macrophylla HOM05D005715 ORTHO05D007160 1.5e-09 65.9 102 36.3
Oeu053625.1 Olea europaea HOM05D005715 ORTHO05D007160 1.5e-09 65.9 85 40.0
Peaxi162Scf00081g00232 Petunia axillaris HOM05D005715 ORTHO05D007160 1.5e-09 65.9 86 43.0
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 4.3e-09 64.3 94 36.2
Zm00001eb325870 Zea mays HOM05D005715 ORTHO05D007160 7.4e-09 63.5 86 37.2
Aqoxy6G02590 Aquilegia oxysepala HOM05D005715 ORTHO05D007160 1.3e-08 62.8 88 36.4
HanXRQChr15g0495001 Helianthus annuus HOM05D005715 ORTHO05D007160 1.3e-08 62.8 88 36.4
Lalb_Chr24g0399501 Lupinus albus HOM05D005715 ORTHO05D007160 2.2e-08 62.0 91 37.4
Lj4P757T25 Lonicera japonica HOM05D005715 ORTHO05D007160 2.8e-08 61.6 96 35.4
ATR0739G069 Amborella trichopoda HOM05D005715 ORTHO05D007160 8.2e-08 60.1 98 34.7
DCAR_008858 Daucus carota HOM05D005715 ORTHO05D007160 8.2e-08 60.1 83 32.5
SalBow2G0154 Salvia bowleyana HOM05D005715 ORTHO05D007160 8.2e-08 60.1 81 38.3
HPP92_024906 Vanilla planifolia HOM05D005715 ORTHO05D007160 1.1e-07 59.7 98 34.7
Zm00001eb108020 Zea mays HOM05D005715 ORTHO05D007160 1.8e-07 58.9 80 36.2
ECA232G0180 Erigeron canadensis HOM05D005715 ORTHO05D007160 2.4e-07 58.5 102 33.3
arahy.Tifrunner.gnm1.ann1.42CAD1 Arachis hypogaea HOM05D005715 ORTHO05D007160 3.1e-07 58.2 120 32.5
DCAR_012819 Daucus carota HOM05D005715 ORTHO05D007160 5.3e-07 57.4 98 28.6


User provided reference genes

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