Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p73580 Brassica napus HOM05D000809 ORTHO05D007735 1.7e-67 259.2 130 100.0
BraA01t01090Z Brassica rapa HOM05D000809 ORTHO05D007735 1.1e-50 203.4 129 86.0
C03p82080 Brassica napus HOM05D000809 ORTHO05D007735 1.4e-50 203.0 130 85.4
A08p14390 Brassica napus HOM05D000809 ORTHO05D007735 4.1e-50 201.4 130 85.4
C01p13510 Brassica napus HOM05D000809 ORTHO05D007735 5.4e-50 201.1 129 83.7
BolC1t01323H Brassica oleracea HOM05D000809 ORTHO05D007735 5.4e-50 201.1 129 83.7
BcaC09g51399 Brassica carinata HOM05D000809 ORTHO05D007735 9.2e-50 200.3 129 84.5
BraA08t33429Z Brassica rapa HOM05D000809 ORTHO05D007735 2.7e-49 198.7 129 84.5
Sp7g18120 Schrenkiella parvula HOM05D000809 ORTHO05D007735 3.5e-49 198.4 129 82.9
BcaB03g11629 Brassica carinata HOM05D000809 ORTHO05D007735 4.5e-49 198.0 129 84.5
A01p11440 Brassica napus HOM05D000809 ORTHO05D007735 4.5e-49 198.0 129 83.7
BcaC01g00620 Brassica carinata HOM05D000809 ORTHO05D007735 5.9e-49 197.6 128 83.6
BolC3t20487H Brassica oleracea HOM05D000809 ORTHO05D007735 5.9e-49 197.6 128 83.6
Thhalv10025776m.g Eutrema salsugineum HOM05D000809 ORTHO05D007735 1.0e-48 196.8 128 83.6
BcaNung01773 Brassica carinata HOM05D000005 ORTHO05D011295 1.7e-48 196.1 129 82.2
CARHR226340 Cardamine hirsuta HOM05D000809 ORTHO05D007735 1.9e-47 192.6 129 81.4
AL7G34590 Arabidopsis lyrata HOM05D000809 ORTHO05D007735 7.3e-47 190.7 129 80.6
AT4G19540 Arabidopsis thaliana HOM05D000809 ORTHO05D007735 7.3e-47 190.7 129 79.8
Carub.0007s2166 Capsella rubella HOM05D000809 ORTHO05D007735 7.3e-47 190.7 129 79.8
Aa31LG6G2130 Aethionema arabicum HOM05D000809 ORTHO05D007735 3.6e-46 188.3 128 81.2
BcaC08g43441 Brassica carinata HOM05D010688 ORTHO05D010630 9.8e-44 180.3 99 93.9
THA.LOC104812897 Tarenaya hassleriana HOM05D000809 ORTHO05D007735 1.9e-39 166.0 126 70.6
C06p08090 Brassica napus HOM05D000809 ORTHO05D007735 2.6e-28 129.0 69 97.1
Ciclev10021421m.g Citrus clementina HOM05D000809 ORTHO05D007735 2.9e-27 125.6 117 59.0
Cpa.g.sc114.64 Carica papaya HOM05D000809 ORTHO05D007735 1.4e-26 123.2 112 58.9
Thecc.01G264600 Theobroma cacao HOM05D000809 ORTHO05D007735 1.4e-26 123.2 114 58.8
Cfa002347 Carpinus fangiana HOM05D000809 ORTHO05D007735 1.9e-26 122.9 120 57.5
COL.COLO4_08270 Corchorus olitorius HOM05D000809 ORTHO05D007735 3.2e-26 122.1 111 59.5
CiPaw.04G183400 Carya illinoinensis HOM05D000809 ORTHO05D007735 2.7e-25 119.0 120 55.8
TWI12G0549 Tripterygium wilfordii HOM05D000809 ORTHO05D007735 6.0e-25 117.9 117 57.3
Duzib138G0205 Durio zibethinus HOM05D000809 ORTHO05D007735 1.0e-24 117.1 116 56.9
Potri.002G042600 Populus trichocarpa HOM05D000809 ORTHO05D007735 1.3e-24 116.7 111 59.5
CANSAT01G1378 Cannabis sativa HOM05D000809 ORTHO05D007735 1.7e-24 116.3 123 52.0
Gohir.A08G060900 Gossypium hirsutum HOM05D000809 ORTHO05D007735 2.3e-24 115.9 111 56.8
Potri.005G220500 Populus trichocarpa HOM05D000809 ORTHO05D007735 2.3e-24 115.9 123 53.7
Sabra05G0169200 Salix brachista HOM05D000809 ORTHO05D007735 3.0e-24 115.5 123 54.5
Manes.01G200200 Manihot esculenta HOM05D000809 ORTHO05D007735 6.6e-24 114.4 125 52.8
Atru.chr5.1607 Acer truncatum HOM05D000809 ORTHO05D007735 8.6e-24 114.0 111 56.8
Gorai.004G073900 Gossypium raimondii HOM05D000809 ORTHO05D007735 8.6e-24 114.0 111 55.9
MD10G1190700 Malus domestica HOM05D000809 ORTHO05D007735 8.6e-24 114.0 116 56.9
PGR031G2014 Punica granatum HOM05D000809 ORTHO05D007735 8.6e-24 114.0 123 51.2
arahy.Tifrunner.gnm1.ann1.2C7EET Arachis hypogaea HOM05D000809 ORTHO05D007735 1.1e-23 113.6 116 53.4
arahy.Tifrunner.gnm1.ann1.T0T3KN Arachis hypogaea HOM05D000809 ORTHO05D007735 1.1e-23 113.6 116 53.4
Lj5A346T16 Lonicera japonica HOM05D000809 ORTHO05D007735 1.9e-23 112.8 123 50.4
Lj5g0009043 Lotus japonicus HOM05D000809 ORTHO05D007735 2.5e-23 112.5 116 52.6
Prupe.8G229700 Prunus persica HOM05D000809 ORTHO05D007735 2.5e-23 112.5 123 52.0
TPR.G9053 Trifolium pratense HOM05D000809 ORTHO05D007735 2.5e-23 112.5 116 52.6
Lalb_Chr02g0142341 Lupinus albus HOM05D000809 ORTHO05D007735 3.3e-23 112.1 116 52.6
ECA248G3003 Erigeron canadensis HOM05D000809 ORTHO05D007735 4.3e-23 111.7 111 56.8
HanXRQChr11g0336671 Helianthus annuus HOM05D000809 ORTHO05D007735 4.3e-23 111.7 111 56.8
Nn3g19549 Nelumbo nucifera HOM05D000809 ORTHO05D007735 4.3e-23 111.7 117 52.1
MD05G1203400 Malus domestica HOM05D000809 ORTHO05D007735 7.3e-23 110.9 117 54.7
DCAR_019439 Daucus carota HOM05D000809 ORTHO05D007735 9.5e-23 110.5 111 53.2
Duzib133G1201 Durio zibethinus HOM05D000809 ORTHO05D007735 1.2e-22 110.2 111 55.9
Medtr1g070360 Medicago truncatula HOM05D000809 ORTHO05D007735 1.2e-22 110.2 116 50.9
Psat6g056240 Pisum sativum HOM05D000809 ORTHO05D007735 1.2e-22 110.2 116 50.9
CSS0007694 Camellia sinensis var. sinensis HOM05D000809 ORTHO05D007735 2.1e-22 109.4 125 51.2
PGSC0003DMG400020142 Solanum tuberosum HOM05D000809 ORTHO05D007735 2.1e-22 109.4 111 53.2
VMungo0720G1163 Vigna mungo HOM05D000809 ORTHO05D007735 2.8e-22 109.0 116 50.9
CSS0013115 Camellia sinensis var. sinensis HOM05D000809 ORTHO05D007735 3.6e-22 108.6 125 51.2
FAN15G3720 Fragaria x ananassa HOM05D000809 ORTHO05D007735 4.7e-22 108.2 123 49.6
FAN27G0496 Fragaria x ananassa HOM05D000809 ORTHO05D007735 6.2e-22 107.8 123 50.4
Solyc06g083990.3 Solanum lycopersicum HOM05D000809 ORTHO05D007735 8.1e-22 107.5 111 53.2
Sopen06g035380 Solanum pennellii HOM05D000809 ORTHO05D007735 8.1e-22 107.5 111 53.2
TAR365G0495 Trochodendron aralioides HOM05D000809 ORTHO05D007735 8.1e-22 107.5 120 51.7
Nitab4.5_0001044g0150 Nicotiana tabacum HOM05D000809 ORTHO05D007735 1.1e-21 107.1 117 52.1
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 1.1e-21 107.1 111 52.3
Aqoxy5G00305 Aquilegia oxysepala HOM05D000809 ORTHO05D007735 1.4e-21 106.7 111 53.2
FvH4_2g22230 Fragaria vesca HOM05D000809 ORTHO05D007735 1.4e-21 106.7 123 49.6
FAN24G2288 Fragaria x ananassa HOM05D000809 ORTHO05D007735 1.4e-21 106.7 123 49.6
Glyma.10G034100 Glycine max HOM05D000809 ORTHO05D007735 1.4e-21 106.7 116 49.1
Phvul.007G178700 Phaseolus vulgaris HOM05D000809 ORTHO05D007735 1.4e-21 106.7 116 50.0
RcHm_v2.0_Chr6g0289151 Rosa chinensis HOM05D000809 ORTHO05D007735 1.4e-21 106.7 123 49.6
Lj2A1156T48 Lonicera japonica HOM05D000809 ORTHO05D007735 1.8e-21 106.3 123 48.0
CAN.G771.19 Capsicum annuum HOM05D000809 ORTHO05D007735 2.4e-21 105.9 110 51.8
PSO210G6413 Papaver somniferum HOM05D000809 ORTHO05D007735 3.1e-21 105.5 120 48.3
Rhsim13G0031900 Rhododendron simsii HOM05D000809 ORTHO05D007735 3.1e-21 105.5 125 48.8
Hund09579 Selenicereus undatus HOM05D000809 ORTHO05D007735 3.1e-21 105.5 114 50.0
ATR0665G343 Amborella trichopoda HOM05D000809 ORTHO05D007735 4.0e-21 105.1 114 50.0
Glyma.13G120300 Glycine max HOM05D000809 ORTHO05D007735 4.0e-21 105.1 116 48.3
PSO832G2272 Papaver somniferum HOM05D000809 ORTHO05D007735 6.8e-21 104.4 123 46.3
Lsat_1_v5_gn_5_186520 Lactuca sativa HOM05D000809 ORTHO05D007735 1.5e-20 103.2 111 53.2
vmacro02636 Vaccinium macrocarpon HOM05D000809 ORTHO05D007735 2.0e-20 102.8 136 45.6
Migut.D00395 Erythranthe guttata HOM05D000809 ORTHO05D007735 2.6e-20 102.4 112 50.9
AUR62032233 Chenopodium quinoa HOM05D000809 ORTHO05D007735 4.4e-20 101.7 113 45.1
AUR62011918 Chenopodium quinoa HOM05D000809 ORTHO05D007735 5.8e-20 101.3 113 44.2
ClCG07G000690 Citrullus lanatus HOM05D000809 ORTHO05D007735 1.3e-19 100.1 105 49.5
Eucgr.B01526 Eucalyptus grandis HOM05D000809 ORTHO05D007735 1.3e-19 100.1 123 48.0
EL10Ac5g10446 Beta vulgaris HOM05D000809 ORTHO05D007735 1.7e-19 99.8 111 47.7
SGA_v2.0_scaffold138G35256 Striga asiatica HOM05D000809 ORTHO05D007735 1.7e-19 99.8 109 50.5
Haze_24556 Corylus avellana HOM05D000809 ORTHO05D007735 3.8e-19 98.6 184 37.5
MSTRG.21505 Avicennia marina HOM05D000809 ORTHO05D007735 6.4e-19 97.8 111 48.6
GSVIVG01000762001 Vitis vinifera HOM05D000809 ORTHO05D007735 6.4e-19 97.8 111 47.7
Cc01_g18660 Coffea canephora HOM05D000809 ORTHO05D007735 8.4e-19 97.4 111 52.3
Sed0013800 Sechium edule HOM05D000809 ORTHO05D007735 3.2e-18 95.5 111 45.9
MELO3C014336.2 Cucumis melo HOM05D000809 ORTHO05D007735 5.4e-18 94.7 111 45.9
CsaV3_6G036790 Cucumis sativus L. HOM05D000809 ORTHO05D007735 7.1e-18 94.4 111 45.9
Sc17g0000830 Simmondsia chinensis HOM05D006365 ORTHO05D007893 1.2e-17 93.6 105 49.5
HPP92_013588 Vanilla planifolia HOM05D000809 ORTHO05D007735 3.0e-16 89.0 111 43.2
AagrBONN_evm.TU.Sc2ySwM_228.4030 Anthoceros agrestis HOM05D000809 ORTHO05D007735 3.9e-16 88.6 110 45.5
Ca_09701_v3 Cicer arietinum L. HOM05D006365 ORTHO05D007893 5.1e-16 88.2 111 45.9
Pp3c18_10900 Physcomitrium patens HOM05D000809 ORTHO05D007735 8.7e-16 87.4 110 45.5
unitig_0.g148 Utricularia gibba HOM05D000809 ORTHO05D007735 8.7e-16 87.4 123 42.3
SMO351G0428 Selaginella moellendorffii HOM05D000809 ORTHO05D007735 2.5e-15 85.9 111 43.2
Mapoly0200s0003 Marchantia polymorpha HOM05D000809 ORTHO05D007735 4.3e-15 85.1 110 44.5
Actinidia16111 Actinidia chinensis HOM05D000809 ORTHO05D007735 1.6e-14 83.2 96 52.1
Oeu040445.1 Olea europaea HOM05D000809 ORTHO05D007735 4.8e-14 81.6 88 48.9
SalBow4G2145 Salvia bowleyana HOM05D000809 ORTHO05D007735 6.2e-14 81.3 99 47.5
Dinv19134 Davidia involucrata HOM05D000809 ORTHO05D007735 1.5e-12 76.6 112 40.2
CBR_g8372 Chara braunii HOM05D000809 ORTHO05D007735 7.6e-12 74.3 113 35.4
Nitab4.5_0006433g0050 Nicotiana tabacum HOM05D000809 ORTHO05D007735 1.7e-11 73.2 67 56.7
Zm00001eb051140 Zea mays HOM05D000809 ORTHO05D007735 3.8e-11 72.0 67 53.7
PRCOL_00002169 Prasinoderma coloniale HOM05D000809 ORTHO05D007735 1.1e-10 70.5 118 36.4
Peaxi162Scf01530g00020 Petunia axillaris HOM05D000809 ORTHO05D007735 1.4e-10 70.1 79 48.1
Cre10.g427050 Chlamydomonas reinhardtii HOM05D000809 ORTHO05D007735 7.8e-09 64.3 111 36.9
MCO11G317 Micromonas commoda HOM05D000809 ORTHO05D007735 8.7e-08 60.8 107 34.6
Mapoly0120s0016 Marchantia polymorpha HOM05D000809 ORTHO05D007735 1.5e-07 60.1 99 37.4
Cfa024987 Carpinus fangiana HOM05D000809 ORTHO05D007735 1.6e-06 56.6 105 34.3


User provided reference genes

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