Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p73430 Brassica napus HOM05D000003 ORTHO05D000283 5.1e-44 180.6 88 100.0
BraA10t44187Z Brassica rapa HOM05D000003 ORTHO05D000283 2.5e-27 125.2 79 70.9
BcaC03g14799 Brassica carinata HOM05D000003 ORTHO05D000283 9.6e-27 123.2 79 74.7
BolC5t30537H Brassica oleracea HOM05D000003 ORTHO05D000283 1.5e-24 115.9 84 66.7
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 1.6e-18 95.9 79 58.2
BolC4t24665H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-18 95.5 83 56.6
BolC6t39474H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-18 95.5 83 54.2
BcaB05g24924 Brassica carinata HOM05D000003 ORTHO05D000004 1.4e-17 92.8 78 51.3
BcaC04g20827 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-17 92.8 83 49.4
BcaC09g51047 Brassica carinata HOM05D000003 ORTHO05D010566 3.1e-17 91.7 84 52.4
Sp1g31420 Schrenkiella parvula HOM05D000003 ORTHO05D000283 3.1e-17 91.7 77 55.8
BraA06t23500Z Brassica rapa HOM05D000003 ORTHO05D000283 4.1e-17 91.3 79 50.6
BraA07t28388Z Brassica rapa HOM05D000003 ORTHO05D000283 4.1e-17 91.3 84 50.0
BcaC04g23526 Brassica carinata HOM05D000003 ORTHO05D000007 6.9e-17 90.5 83 54.2
BcaB01g03207 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-16 89.7 83 53.0
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-16 89.7 83 53.0
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.5e-16 89.4 79 54.4
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-16 89.4 83 57.8
BcaB03g15450 Brassica carinata HOM05D000003 ORTHO05D010566 2.0e-16 89.0 84 53.6
BcaC09g50321 Brassica carinata HOM05D000003 ORTHO05D010566 2.0e-16 89.0 84 52.4
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 3.4e-16 88.2 83 55.4
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 3.4e-16 88.2 79 54.4
BcaB06g27113 Brassica carinata HOM05D000003 ORTHO05D010566 5.9e-16 87.4 83 53.0
BcaC02g12383 Brassica carinata HOM05D000003 ORTHO05D000283 5.9e-16 87.4 84 51.2
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 1.0e-15 86.7 86 50.0
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 1.0e-15 86.7 79 49.4
BolC7t44516H Brassica oleracea HOM05D000003 ORTHO05D000283 1.0e-15 86.7 73 53.4
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-15 86.3 83 53.0
BcaC04g21154 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-15 86.3 83 55.4
BcaNung03095 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-15 86.3 83 53.0
BcaC03g18113 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-15 85.9 83 54.2
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 2.2e-15 85.5 83 47.0
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 2.2e-15 85.5 83 54.2
BcaB07g30964 Brassica carinata HOM05D000003 ORTHO05D000283 2.2e-15 85.5 83 47.0
BcaB07g32816 Brassica carinata HOM05D000003 ORTHO05D000004 2.2e-15 85.5 75 50.7
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.2e-15 85.5 80 50.0
AT5G18880 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.9e-15 85.1 71 54.9
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-15 85.1 85 49.4
BcaB03g14902 Brassica carinata HOM05D000003 ORTHO05D000004 2.9e-15 85.1 83 49.4
BcaB03g16295 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-15 85.1 79 54.4
BcaC02g10364 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-15 85.1 84 48.8
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-15 85.1 79 45.6
AL6G28130 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.8e-15 84.7 71 54.9
BcaNung06301 Brassica carinata HOM05D000003 ORTHO05D010566 3.8e-15 84.7 84 50.0
BolC6t37289H Brassica oleracea HOM05D000003 ORTHO05D010566 3.8e-15 84.7 78 48.7
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 6.5e-15 84.0 84 50.0
THA.LOC104814740 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.5e-15 84.0 83 45.8
BcaB07g32023 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-14 82.8 83 45.8
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 1.9e-14 82.4 85 50.6
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 2.5e-14 82.0 83 49.4
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 4.2e-14 81.3 83 44.6
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 4.2e-14 81.3 83 38.6
THA.LOC104803385 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 4.2e-14 81.3 76 47.4
AL9U10510 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 5.5e-14 80.9 64 51.6
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 7.2e-14 80.5 84 47.6
BcaC02g07123 Brassica carinata HOM05D000003 ORTHO05D000283 9.4e-14 80.1 83 47.0
BcaB03g14792 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-13 79.3 78 47.4
BcaC01g03694 Brassica carinata HOM05D000003 ORTHO05D000283 1.6e-13 79.3 83 51.8
BcaC08g45218 Brassica carinata HOM05D000003 ORTHO05D000007 2.1e-13 79.0 83 49.4
THA.LOC104801630 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.7e-13 78.6 79 45.6
THA.LOC104803189 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.7e-13 78.6 79 45.6
BcaB04g20911 Brassica carinata HOM05D000003 ORTHO05D000004 4.6e-13 77.8 79 46.8
BcaC01g00759 Brassica carinata HOM05D000003 ORTHO05D000004 6.1e-13 77.4 84 46.4
THA.LOC104801863 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.1e-13 77.4 84 44.0
THA.LOC109116043 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.1e-13 77.4 79 41.8
THA.LOC104807150 Tarenaya hassleriana HOM05D000583 ORTHO05D000004 1.0e-12 76.6 71 47.9
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-12 76.3 83 42.2
THA.LOC104814698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.8e-12 75.9 80 45.0
BcaC06g36701 Brassica carinata HOM05D000003 ORTHO05D000004 5.1e-12 74.3 79 44.3
C03p51940 Brassica napus HOM05D000003 ORTHO05D000283 5.1e-12 74.3 85 41.2
BcaC07g38922 Brassica carinata HOM05D000003 ORTHO05D000283 6.7e-12 73.9 79 43.0
THA.LOC104800051 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.7e-12 73.9 71 43.7
THA.LOC104803479 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 6.7e-12 73.9 79 39.2
THA.LOC104825789 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 6.7e-12 73.9 68 47.1
THA.LOC109116115 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 6.7e-12 73.9 79 41.8
BolC8t50095H Brassica oleracea HOM05D000003 ORTHO05D000004 8.8e-12 73.6 83 45.8
THA.LOC104822537 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 8.8e-12 73.6 79 39.2
BolC9t58165H Brassica oleracea HOM05D000003 ORTHO05D000283 1.1e-11 73.2 77 48.1
BcaC01g04931 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-11 72.8 79 44.3
BolC3t21045H Brassica oleracea HOM05D000003 ORTHO05D000283 1.5e-11 72.8 77 45.5
BcaB05g22301 Brassica carinata HOM05D000003 ORTHO05D000283 2.5e-11 72.0 79 44.3
Sp4g01340 Schrenkiella parvula HOM05D000003 ORTHO05D000283 2.5e-11 72.0 70 45.7
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.5e-11 72.0 76 42.1
THA.LOC109116119 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.5e-11 72.0 85 36.5
THA.LOC109116848 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.5e-11 72.0 73 42.5
THA.LOC104800018 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.3e-11 71.6 79 39.2
THA.LOC104809801 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.3e-11 71.6 80 38.8
AL8G14770 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 4.3e-11 71.2 79 48.1
BcaB02g11235 Brassica carinata HOM05D000003 ORTHO05D000007 4.3e-11 71.2 55 61.8
BcaC06g32188 Brassica carinata HOM05D000003 ORTHO05D000283 4.3e-11 71.2 79 38.0
BcaB08g37117 Brassica carinata HOM05D000003 ORTHO05D000283 5.7e-11 70.9 77 44.2
BolC5t31110H Brassica oleracea HOM05D000003 ORTHO05D000283 5.7e-11 70.9 77 42.9
THA.LOC104825191 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 5.7e-11 70.9 78 41.0
BcaC01g03249 Brassica carinata HOM05D000003 ORTHO05D010566 7.4e-11 70.5 83 47.0
BolC3t17050H Brassica oleracea HOM05D000003 ORTHO05D000283 7.4e-11 70.5 83 39.8
BraA02t05261Z Brassica rapa HOM05D000003 ORTHO05D000283 7.4e-11 70.5 77 44.2
Carub.0003s1889 Capsella rubella HOM05D000003 ORTHO05D000283 7.4e-11 70.5 77 44.2
A03p51840 Brassica napus HOM05D000003 ORTHO05D000283 9.7e-11 70.1 71 45.1
AL2G38250 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.7e-10 69.3 71 42.3
BcaC01g02774 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-10 69.3 78 46.2
BcaC02g12080 Brassica carinata HOM05D000003 ORTHO05D000006 1.7e-10 69.3 78 38.5
BraA06t26517Z Brassica rapa HOM05D000003 ORTHO05D000283 1.7e-10 69.3 56 55.4
BcaC02g07507 Brassica carinata HOM05D000003 ORTHO05D000004 2.2e-10 68.9 77 40.3
THA.LOC104807041 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.2e-10 68.9 78 39.7
AT1G60720 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.8e-10 68.6 86 39.5
BcaC07g39441 Brassica carinata HOM05D000003 ORTHO05D000006 2.8e-10 68.6 67 49.3
THA.LOC104801567 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.8e-10 68.6 84 38.1
THA.LOC104817065 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.8e-10 68.6 71 42.3
BcaC05g27538 Brassica carinata HOM05D000003 ORTHO05D000283 3.7e-10 68.2 77 45.5
BolC5t33234H Brassica oleracea HOM05D000003 ORTHO05D000283 3.7e-10 68.2 79 40.5
THA.LOC104802714 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 4.8e-10 67.8 83 36.1
BcaB06g29380 Brassica carinata HOM05D000003 ORTHO05D000283 6.3e-10 67.4 78 37.2
BcaC04g19549 Brassica carinata HOM05D000003 ORTHO05D000283 6.3e-10 67.4 79 36.7
BolC3t16330H Brassica oleracea HOM05D000003 ORTHO05D000283 8.2e-10 67.0 75 38.7
BraA05t21021Z Brassica rapa HOM05D000003 ORTHO05D000283 8.2e-10 67.0 70 44.3
AT5G16486 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.1e-09 66.6 69 40.6
BolC1t05746H Brassica oleracea HOM05D000003 ORTHO05D000283 1.1e-09 66.6 77 37.7
BraA01t01070Z Brassica rapa HOM05D000003 ORTHO05D000283 1.1e-09 66.6 68 47.1
THA.LOC104810684 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.1e-09 66.6 79 35.4
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.8e-09 65.9 71 38.0
BraA02t07942Z Brassica rapa HOM05D000003 ORTHO05D000283 1.8e-09 65.9 79 40.5
THA.LOC104804698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.8e-09 65.9 79 41.8
BcaB01g00271 Brassica carinata HOM05D000003 ORTHO05D003342 3.1e-09 65.1 70 38.6
BolC8t51615H Brassica oleracea HOM05D000003 ORTHO05D000283 3.1e-09 65.1 68 47.1
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 4.1e-09 64.7 70 47.1
BcaC08g44634 Brassica carinata HOM05D000003 ORTHO05D000004 4.1e-09 64.7 79 38.0
THA.LOC104801759 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 4.1e-09 64.7 71 40.8
BcaC03g15588 Brassica carinata HOM05D000003 ORTHO05D000283 5.3e-09 64.3 79 38.0
A03p35460 Brassica napus HOM05D000003 ORTHO05D000283 5.3e-09 64.3 85 37.6
BraA03t12723Z Brassica rapa HOM05D000003 ORTHO05D000283 5.3e-09 64.3 85 37.6
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 6.9e-09 63.9 71 36.6
Aa31LG9G2500 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.1e-09 63.5 66 43.9
AT4G04650 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 9.1e-09 63.5 79 35.4
BolC8t46826H Brassica oleracea HOM05D000003 ORTHO05D000283 9.1e-09 63.5 68 45.6
THA.LOC104825769 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.0e-08 62.4 64 48.4
Carub.0001s4199 Capsella rubella HOM05D000003 ORTHO05D000283 2.6e-08 62.0 71 39.4
THA.LOC104804825 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.6e-08 62.0 74 39.2
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 3.4e-08 61.6 60 50.0
BcaB04g17341 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-08 61.2 62 43.5
BolC9t54357H Brassica oleracea HOM05D000003 ORTHO05D000283 4.5e-08 61.2 57 47.4
BcaB08g36266 Brassica carinata HOM05D000003 ORTHO05D000283 5.9e-08 60.8 79 35.4
BcaC01g04544 Brassica carinata HOM05D000003 ORTHO05D000283 1.0e-07 60.1 71 36.6
BraSC141t45627Z Brassica rapa HOM05D000003 ORTHO05D000283 1.0e-07 60.1 67 41.8
THA.LOC104821877 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.0e-07 60.1 70 37.1
THA.LOC104810153 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.3e-07 59.7 71 42.3
Carub.0003s3092 Capsella rubella HOM05D000003 ORTHO05D000283 1.7e-07 59.3 57 45.6
Aa31LG9G4310 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 58.9 79 36.7
BcaC05g29078 Brassica carinata HOM05D000003 ORTHO05D000283 2.2e-07 58.9 74 43.2
BcaC05g27494 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-07 58.5 74 43.2
BraA04t16116Z Brassica rapa HOM05D000003 ORTHO05D000283 2.9e-07 58.5 61 41.0
THA.LOC109116242 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.9e-07 58.5 71 40.8
AL4G28120 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.8e-07 58.2 75 34.7
AT3G25720 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 3.8e-07 58.2 67 37.3
BcaC06g31478 Brassica carinata HOM05D000003 ORTHO05D000283 3.8e-07 58.2 79 36.7
BraA01t03808Z Brassica rapa HOM05D000003 ORTHO05D000283 3.8e-07 58.2 64 40.6
BolC6t35361H Brassica oleracea HOM05D000003 ORTHO05D000283 5.0e-07 57.8 86 34.9
AL1G53250 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 6.5e-07 57.4 77 37.7
BcaC08g44788 Brassica carinata HOM05D000003 ORTHO05D000283 8.5e-07 57.0 70 37.1
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 8.5e-07 57.0 86 41.9
AL6G39210 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.1e-06 56.6 75 34.7
ECA246G3562 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 56.6 69 34.8
ECA234G3773 Erigeron canadensis HOM05D000006 ORTHO05D000004 1.9e-06 55.8 78 33.3
BcaB05g22645 Brassica carinata HOM05D000003 ORTHO05D000283 2.5e-06 55.5 64 40.6
BraA03t15479Z Brassica rapa HOM05D029521 ORTHO05D027368 2.5e-06 55.5 86 33.7
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 3.2e-06 55.1 83 38.6
BolC2t06931H Brassica oleracea HOM05D000003 ORTHO05D000283 4.2e-06 54.7 64 37.5
BraA09t37875Z Brassica rapa HOM05D000003 ORTHO05D000004 5.5e-06 54.3 80 31.2
ECA240G1508 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 54.3 67 34.3
C09p27360 Brassica napus HOM05D000003 ORTHO05D000283 7.2e-06 53.9 78 37.2
Carub.0006s1986 Capsella rubella HOM05D000003 ORTHO05D000283 7.2e-06 53.9 77 32.5
BcaB03g15077 Brassica carinata HOM05D000003 ORTHO05D000283 9.4e-06 53.5 56 41.1
Sp2g05260 Schrenkiella parvula HOM05D000003 ORTHO05D000283 9.4e-06 53.5 72 33.3


User provided reference genes

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