Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.1e-161 572.4 309 100.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 2.9e-142 508.8 309 91.9
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 3.4e-127 458.8 313 84.0
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.9e-125 453.0 326 80.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 7.8e-124 447.6 311 83.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 7.8e-124 447.6 311 83.0
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.4e-120 436.0 319 80.3
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.4e-112 409.5 303 79.5
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.2e-111 407.1 303 79.2
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.8e-99 366.7 318 69.5
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 9.7e-90 334.3 284 70.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 8.5e-78 294.7 316 57.0
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.9e-77 293.5 286 59.4
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 5.5e-77 292.0 322 55.9
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.2e-76 290.8 255 62.7
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-76 290.8 231 66.2
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.0e-75 287.7 232 68.5
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.8e-75 287.0 302 56.3
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.8e-75 287.0 317 53.9
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 8.8e-75 284.6 238 65.5
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.1e-74 284.3 306 55.6
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 4.4e-74 282.3 321 55.8
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 5.7e-74 282.0 248 62.1
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 7.4e-74 281.6 291 58.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.3e-73 280.8 295 55.9
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.7e-73 280.4 202 79.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.2e-73 280.0 291 56.7
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.2e-73 280.0 232 67.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.7e-73 279.3 320 51.6
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 3.7e-73 279.3 329 51.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 6.3e-73 278.5 313 54.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 8.2e-73 278.1 265 58.9
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 8.2e-73 278.1 288 57.6
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 8.2e-73 278.1 255 60.4
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 8.2e-73 278.1 258 59.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.1e-72 277.7 296 55.7
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.4e-72 277.3 323 52.3
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.4e-72 277.3 309 55.0
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.1e-72 275.8 242 62.8
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 4.1e-72 275.8 229 62.4
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 7.0e-72 275.0 313 52.7
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 9.1e-72 274.6 285 55.1
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.2e-71 274.2 323 52.9
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.2e-71 274.2 232 64.7
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.2e-71 274.2 288 55.9
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.6e-71 273.1 229 62.9
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.6e-71 273.1 287 55.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.5e-71 272.7 229 62.4
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.7e-70 270.4 278 55.4
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.7e-70 270.4 217 65.9
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.8e-70 269.2 320 52.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.8e-70 269.2 316 51.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 6.5e-70 268.5 294 53.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 6.5e-70 268.5 305 53.4
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.9e-69 266.9 258 58.1
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.2e-69 265.8 297 57.6
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 7.2e-69 265.0 321 50.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.2e-69 265.0 261 56.7
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 7.2e-69 265.0 256 57.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 9.4e-69 264.6 316 52.5
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.1e-68 263.5 261 56.3
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.7e-68 263.1 299 53.5
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 3.6e-68 262.7 249 58.2
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.4e-67 260.8 315 51.7
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 4.0e-67 259.2 315 50.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 6.7e-67 258.5 281 54.4
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 6.7e-67 258.5 280 54.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 6.7e-67 258.5 242 57.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.4e-66 255.8 261 56.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.8e-64 250.4 332 49.4
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.4e-64 250.0 321 50.8
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 4.1e-64 249.2 322 51.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.6e-63 247.3 305 50.5
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.9e-63 245.4 322 51.2
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-62 244.2 288 53.1
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.2e-62 243.4 288 52.8
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.9e-62 243.0 200 63.5
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.9e-62 243.0 301 50.5
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.0e-62 242.3 288 53.1
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.9e-61 240.4 199 64.3
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 2.7e-60 236.5 328 47.3
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.7e-60 235.7 283 53.0
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 4.7e-60 235.7 325 46.2
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.0e-59 234.6 195 65.6
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.4e-59 234.2 195 65.6
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.0e-59 232.6 245 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.5e-58 230.7 241 50.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.5e-58 230.7 233 51.9
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.4e-58 229.2 280 52.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 4.8e-57 225.7 251 56.2
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.4e-56 224.2 230 52.2
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.7e-54 217.2 193 61.7
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 8.5e-54 214.9 222 55.0
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.9e-53 213.8 266 50.8
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 4.7e-52 209.1 304 46.7
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 6.8e-51 205.3 275 49.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.0e-47 193.7 235 51.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.0e-46 191.4 248 48.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 9.5e-45 184.9 201 54.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.0e-42 177.2 234 42.7
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.0e-42 177.2 160 59.4
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.6e-42 176.8 140 74.3
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.6e-42 176.8 236 47.0
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.6e-42 176.8 219 48.9
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 5.4e-40 169.1 195 51.3
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.3e-37 159.8 289 43.6
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 8.0e-36 155.2 210 44.3
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.6e-34 150.2 167 46.7
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 7.5e-34 148.7 129 64.3
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 4.9e-33 146.0 184 51.6
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 3.2e-32 143.3 165 55.8
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.8e-31 138.7 281 39.5
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.6e-28 131.0 279 38.0
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 9.5e-21 105.1 91 60.4
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.2e-20 104.8 235 33.2
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 6.8e-19 99.0 202 30.7
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 5.1e-14 82.8 72 59.7
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.9e-13 80.9 216 30.1
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 5.6e-13 79.3 72 59.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 8.1e-12 75.5 83 50.6
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 4.9e-09 66.2 50 60.0


User provided reference genes

Program Settings