Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-160 568.9 287 100.0
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 6.3e-160 567.4 287 99.7
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 8.2e-160 567.0 287 99.7
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 2.0e-158 562.4 287 99.0
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 8.9e-114 414.1 294 74.5
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 6.2e-91 338.2 175 97.1
C06p06100 Brassica napus HOM05D006735 ORTHO05D009558 1.8e-90 336.7 175 97.1
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 5.3e-82 308.5 186 88.2
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 2.9e-72 276.2 195 74.4
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 8.4e-72 274.6 193 74.6
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 2.0e-65 253.4 182 74.7
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 9.1e-58 228.0 163 76.1
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 1.7e-56 223.8 211 57.8
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 3.8e-56 222.6 210 56.2
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 2.5e-55 219.9 211 56.4
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 2.5e-55 219.9 204 56.9
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 4.2e-55 219.2 204 56.9
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 4.2e-55 219.2 204 56.9
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-54 217.2 217 56.2
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-54 217.2 197 57.4
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 6.7e-53 211.8 214 55.1
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 3.3e-52 209.5 219 52.1
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 9.7e-52 208.0 219 52.1
C03p72010 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-48 196.8 106 97.2
BcaC01g00870 Brassica carinata HOM05D006735 ORTHO05D009558 7.2e-47 191.8 213 49.3
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 9.4e-47 191.4 208 51.4
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-41 174.1 206 49.5
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 2.9e-40 169.9 205 47.3
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 3.2e-39 166.4 201 49.8
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 4.2e-39 166.0 200 47.5
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 4.2e-39 166.0 200 47.5
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 4.7e-38 162.5 186 47.3
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 6.8e-37 158.7 169 55.0
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 9.1e-34 148.3 199 46.7
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 4.5e-33 146.0 164 52.4
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 7.7e-33 145.2 165 52.7
C04p69020 Brassica napus HOM05D000034 ORTHO05D000037 9.1e-26 121.7 89 66.3
C03p67160 Brassica napus HOM05D006735 ORTHO05D009558 5.9e-25 119.0 169 46.2
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 1.5e-20 104.4 197 36.5
CARHR117250 Cardamine hirsuta HOM05D000477 ORTHO05D000338 9.8e-20 101.7 74 62.2
BcaC04g18966 Brassica carinata HOM05D006735 ORTHO05D009558 1.2e-17 94.7 196 35.2
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 5.9e-17 92.4 209 33.0
BolC3t18997H Brassica oleracea HOM05D006735 ORTHO05D009558 7.8e-17 92.0 145 40.7
C08p11240 Brassica napus HOM05D006735 ORTHO05D009558 3.3e-15 86.7 69 53.6
CARHR286360 Cardamine hirsuta HOM05D006735 ORTHO05D009558 3.3e-15 86.7 78 52.6
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 1.2e-14 84.7 174 36.2
BolC8t49602H Brassica oleracea HOM05D006735 ORTHO05D009558 1.6e-14 84.3 200 30.0
BolC7t41471H Brassica oleracea HOM05D006735 ORTHO05D009558 6.1e-14 82.4 200 30.0
C09p40840 Brassica napus HOM05D006735 ORTHO05D009558 2.3e-13 80.5 55 60.0
AL2G40820 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 4.0e-13 79.7 90 41.1
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 5.2e-13 79.3 200 29.5
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 6.8e-13 79.0 173 34.7
A09p18970 Brassica napus HOM05D006735 ORTHO05D009558 4.4e-12 76.3 180 30.6
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 5.8e-12 75.9 196 29.6
AT1G80625 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 6.4e-11 72.4 90 38.9
BcaC01g02992 Brassica carinata HOM05D006735 ORTHO05D009558 3.2e-10 70.1 199 29.1
Sp5g35140 Schrenkiella parvula HOM05D006735 ORTHO05D009558 3.2e-10 70.1 104 40.4
BcaB04g16973 Brassica carinata HOM05D006735 ORTHO05D009558 5.4e-10 69.3 103 43.7
BcaC04g20609 Brassica carinata HOM05D028599 ORTHO05D027333 7.0e-10 68.9 193 28.0
BolC9t57034H Brassica oleracea HOM05D028599 ORTHO05D027333 7.0e-10 68.9 193 28.0
C02p59260 Brassica napus HOM05D006735 ORTHO05D009558 2.0e-09 67.4 47 61.7
BcaB06g27920 Brassica carinata HOM05D012420 ORTHO05D019981 7.8e-09 65.5 201 25.9
C09p41560 Brassica napus HOM05D028599 ORTHO05D027333 7.8e-09 65.5 193 28.0
C05p34980 Brassica napus HOM05D012420 ORTHO05D019981 1.0e-08 65.1 186 25.8
A07p01920 Brassica napus HOM05D006735 ORTHO05D009558 2.3e-08 63.9 124 37.1
C08p03780 Brassica napus HOM05D006735 ORTHO05D009558 2.3e-08 63.9 131 35.9
BraA09t36193Z Brassica rapa HOM05D012420 ORTHO05D019981 5.0e-08 62.8 186 25.3
BcaC01g01276 Brassica carinata HOM05D000034 ORTHO05D000037 6.6e-08 62.4 59 50.8
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 8.6e-08 62.0 52 50.0
C06p27010 Brassica napus HOM05D006735 ORTHO05D009558 8.6e-08 62.0 116 36.2
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 8.6e-08 62.0 72 37.5
C07p10210 Brassica napus HOM05D006735 ORTHO05D009558 1.5e-07 61.2 77 41.6
A05p11690 Brassica napus HOM05D006735 ORTHO05D009558 3.3e-07 60.1 39 64.1
C06p13880 Brassica napus HOM05D006735 ORTHO05D009558 3.3e-07 60.1 126 40.5
BraA03t15421Z Brassica rapa HOM05D028599 ORTHO05D027333 7.3e-07 58.9 60 45.0
BcaC01g01277 Brassica carinata HOM05D006735 ORTHO05D009558 9.5e-07 58.5 159 33.3
BolC4t22522H Brassica oleracea HOM05D006735 ORTHO05D009558 1.2e-06 58.2 107 33.6
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 3.6e-06 56.6 160 27.5


User provided reference genes

Program Settings