Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p70660 Brassica napus HOM05D002678 ORTHO05D027568 9.7e-74 280.0 138 100.0
BolC3t19317H Brassica oleracea HOM05D002678 ORTHO05D027568 2.8e-73 278.5 138 99.3
BcaC01g01914 Brassica carinata HOM05D002678 ORTHO05D027568 3.1e-72 275.0 138 98.6
BraA06t25175Z Brassica rapa HOM05D002678 ORTHO05D027568 7.9e-60 233.8 138 87.0
BcaB02g10727 Brassica carinata HOM05D002678 ORTHO05D002920 6.3e-25 117.9 119 56.3
Thhalv10002850m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 1.4e-24 116.7 116 59.5
AT3G46300 Arabidopsis thaliana HOM05D002678 ORTHO05D002920 6.8e-19 97.8 116 50.9
Sp5g15360 Schrenkiella parvula HOM05D002678 ORTHO05D002920 3.4e-18 95.5 113 49.6
AL5G25200 Arabidopsis lyrata HOM05D002678 ORTHO05D002920 4.1e-16 88.6 116 48.3
AT3G46310 Arabidopsis thaliana HOM05D002678 ORTHO05D002920 7.0e-16 87.8 117 42.7
BcaB01g01015 Brassica carinata HOM05D002678 ORTHO05D002920 4.6e-15 85.1 121 47.1
Thhalv10002906m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 1.3e-14 83.6 118 45.8
A06p20930 Brassica napus HOM05D002678 ORTHO05D002920 1.7e-14 83.2 118 44.9
AL5G25210 Arabidopsis lyrata HOM05D002678 ORTHO05D002920 2.3e-14 82.8 117 42.7
BraA06t25176Z Brassica rapa HOM05D002678 ORTHO05D002920 3.0e-14 82.4 118 44.1
BolC3t19318H Brassica oleracea HOM05D002678 ORTHO05D002920 5.0e-14 81.6 120 42.5
Carub.0005s1215 Capsella rubella HOM05D002678 ORTHO05D002920 5.0e-14 81.6 115 48.7
C03p70650 Brassica napus HOM05D002678 ORTHO05D002920 6.6e-14 81.3 120 42.5
BcaC01g01915 Brassica carinata HOM05D002678 ORTHO05D002920 1.9e-13 79.7 120 42.5
Carub.0005s1216 Capsella rubella HOM05D002678 ORTHO05D002920 3.3e-13 79.0 115 40.9
THA.LOC104814872 Tarenaya hassleriana HOM05D002678 ORTHO05D002920 7.3e-13 77.8 124 41.1
MELO3C025706.2 Cucumis melo HOM05D002678 ORTHO05D002920 7.1e-08 61.2 54 57.4
CsaV3_6G022030 Cucumis sativus L. HOM05D002678 ORTHO05D002920 7.1e-08 61.2 54 57.4
Sp6g39880 Schrenkiella parvula HOM05D002678 ORTHO05D002920 9.2e-08 60.8 54 53.7
Thhalv10014890m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 1.2e-07 60.5 93 37.6
ATR0759G110 Amborella trichopoda HOM05D002678 ORTHO05D002920 1.6e-07 60.1 119 32.8
BcaC06g32005 Brassica carinata HOM05D002678 ORTHO05D002920 1.6e-07 60.1 55 50.9
ClCG02G020590 Citrullus lanatus HOM05D002678 ORTHO05D002920 1.6e-07 60.1 54 55.6
Glyma.19G175800 Glycine max HOM05D002678 ORTHO05D002920 1.6e-07 60.1 129 32.6
Sed0001325 Sechium edule HOM05D002678 ORTHO05D002920 1.6e-07 60.1 55 56.4
Duzib170G1033 Durio zibethinus HOM05D002678 ORTHO05D002920 2.1e-07 59.7 56 57.1
Gohir.D04G117300 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.7e-07 59.3 116 36.2
SalBow3G1187 Salvia bowleyana HOM05D002678 ORTHO05D002920 2.7e-07 59.3 61 50.8
TWI53G1006 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 3.5e-07 58.9 115 36.5
A03p00870 Brassica napus HOM05D002678 ORTHO05D002920 4.6e-07 58.5 129 32.6
CiPaw.09G186200 Carya illinoinensis HOM05D002678 ORTHO05D002920 4.6e-07 58.5 116 37.1
Gorai.009G422300 Gossypium raimondii HOM05D002678 ORTHO05D002920 4.6e-07 58.5 116 35.3
THA.LOC104826999 Tarenaya hassleriana HOM05D002678 ORTHO05D002920 4.6e-07 58.5 55 49.1
Actinidia37266 Actinidia chinensis HOM05D002678 ORTHO05D002920 6.0e-07 58.2 58 53.4
BcaNung03282 Brassica carinata HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
A10p33010 Brassica napus HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
C03p01120 Brassica napus HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
C09p73980 Brassica napus HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
BolC3t12671H Brassica oleracea HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
BolC9t60133H Brassica oleracea HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
BraA10t45338Z Brassica rapa HOM05D002678 ORTHO05D002920 6.0e-07 58.2 54 50.0
Ciclev10012982m.g Citrus clementina HOM05D002678 ORTHO05D002920 6.0e-07 58.2 85 40.0
Medtr1g067350 Medicago truncatula HOM05D002678 ORTHO05D002920 6.0e-07 58.2 140 32.9
Nn2g12832 Nelumbo nucifera HOM05D002678 ORTHO05D002920 6.0e-07 58.2 53 54.7
Aqoxy2G01947 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 7.8e-07 57.8 52 59.6
Phvul.001G172100 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 7.8e-07 57.8 123 33.3
Prupe.6G246400 Prunus persica HOM05D002678 ORTHO05D002920 1.0e-06 57.4 121 35.5
Ciclev10030290m.g Citrus clementina HOM05D002678 ORTHO05D002920 1.3e-06 57.0 105 37.1
VMungo1383G3255 Vigna mungo HOM05D002678 ORTHO05D002920 1.3e-06 57.0 60 50.0
Eucgr.A01213 Eucalyptus grandis HOM05D002678 ORTHO05D002920 1.7e-06 56.6 131 32.1
Hma1.2p1_0746F.1_g212310 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 1.7e-06 56.6 56 48.2
Medtr7g100340 Medicago truncatula HOM05D002678 ORTHO05D002920 1.7e-06 56.6 124 33.1
Cpa.g.sc3922.1 Carica papaya HOM05D002678 ORTHO05D002920 2.3e-06 56.2 89 40.4
Gohir.A09G160000 Gossypium hirsutum HOM05D002678 ORTHO05D002920 2.3e-06 56.2 114 35.1
Peaxi162Scf00411g00813 Petunia axillaris HOM05D002678 ORTHO05D002920 2.3e-06 56.2 64 46.9
CANSAT80G0424 Cannabis sativa HOM05D002678 ORTHO05D002920 3.0e-06 55.8 60 53.3
CARHR210710 Cardamine hirsuta HOM05D002678 ORTHO05D002920 3.0e-06 55.8 53 49.1
Duzib106G2004 Durio zibethinus HOM05D002678 ORTHO05D002920 3.0e-06 55.8 118 35.6
Gohir.A04G078100 Gossypium hirsutum HOM05D002678 ORTHO05D002920 3.0e-06 55.8 90 41.1
Gorai.006G177000 Gossypium raimondii HOM05D002678 ORTHO05D002920 3.0e-06 55.8 114 35.1
Oeu040266.1 Olea europaea HOM05D002678 ORTHO05D002920 3.0e-06 55.8 66 48.5
Rhsim05G0185100 Rhododendron simsii HOM05D002678 ORTHO05D002920 3.0e-06 55.8 57 50.9
TAR623G1692 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.9e-06 55.5 53 52.8
BcaB01g06197 Brassica carinata HOM05D002678 ORTHO05D002920 5.1e-06 55.1 132 32.6
Gohir.D09G155600 Gossypium hirsutum HOM05D002678 ORTHO05D002920 5.1e-06 55.1 114 35.1
MD12G1132300 Malus domestica HOM05D002678 ORTHO05D002920 5.1e-06 55.1 127 33.9
Carub.0006s0146 Capsella rubella HOM05D002678 ORTHO05D002920 6.6e-06 54.7 55 45.5
Duzib150G0336 Durio zibethinus HOM05D002678 ORTHO05D002920 6.6e-06 54.7 135 31.9
Glyma.03G175100 Glycine max HOM05D002678 ORTHO05D002920 6.6e-06 54.7 91 39.6
Gohir.A08G000129 Gossypium hirsutum HOM05D002678 ORTHO05D002920 6.6e-06 54.7 131 32.1
Gorai.004G003100 Gossypium raimondii HOM05D002678 ORTHO05D002920 6.6e-06 54.7 131 32.1
Lj1g0018959 Lotus japonicus HOM05D002678 ORTHO05D002920 6.6e-06 54.7 138 32.6
Nn2g10547 Nelumbo nucifera HOM05D002678 ORTHO05D002920 6.6e-06 54.7 53 52.8
Atru.chr3.3786 Acer truncatum HOM05D002678 ORTHO05D002920 8.6e-06 54.3 67 46.3
AL6G11940 Arabidopsis lyrata HOM05D002678 ORTHO05D002920 8.6e-06 54.3 53 47.2
AT5G02640 Arabidopsis thaliana HOM05D002678 ORTHO05D002920 8.6e-06 54.3 53 47.2
Dinv06291 Davidia involucrata HOM05D002678 ORTHO05D002920 8.6e-06 54.3 88 39.8
Thecc.05G048400 Theobroma cacao HOM05D002678 ORTHO05D002920 8.6e-06 54.3 127 33.9


User provided reference genes

Program Settings