Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p70250 Brassica napus HOM05D000003 ORTHO05D010566 1.5e-53 212.6 112 100.0
BraA05t20597Z Brassica rapa HOM05D000003 ORTHO05D010566 6.1e-34 147.5 85 91.8
BolC2t08958H Brassica oleracea HOM05D000003 ORTHO05D010566 4.4e-24 114.8 82 73.2
BolC7t44516H Brassica oleracea HOM05D000003 ORTHO05D000283 7.5e-16 87.4 85 52.9
BolC6t37289H Brassica oleracea HOM05D000003 ORTHO05D010566 2.8e-15 85.5 84 53.6
Sp6g08880 Schrenkiella parvula HOM05D000003 ORTHO05D010566 1.0e-12 77.0 85 50.6
BcaC01g02774 Brassica carinata HOM05D000003 ORTHO05D000283 6.5e-12 74.3 69 50.7
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 4.2e-11 71.6 85 47.1
BolC5t30537H Brassica oleracea HOM05D000003 ORTHO05D000283 5.5e-11 71.2 85 47.1
BraA10t44187Z Brassica rapa HOM05D000003 ORTHO05D000283 5.5e-11 71.2 84 47.6
BolC3t18461H Brassica oleracea HOM05D000003 ORTHO05D010566 1.2e-10 70.1 80 43.8
BraA06t23500Z Brassica rapa HOM05D000003 ORTHO05D000283 2.7e-10 68.9 86 45.3
BolC9t55125H Brassica oleracea HOM05D000003 ORTHO05D010566 3.6e-10 68.6 86 43.0
BcaB03g14902 Brassica carinata HOM05D000003 ORTHO05D000004 4.0e-09 65.1 84 47.6
BraA07t31644Z Brassica rapa HOM05D000003 ORTHO05D010566 6.8e-09 64.3 88 46.6
BcaB01g03207 Brassica carinata HOM05D000003 ORTHO05D000283 8.8e-09 63.9 85 48.2
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 2.0e-08 62.8 83 47.0
BolC2t10387H Brassica oleracea HOM05D000003 ORTHO05D010566 3.4e-08 62.0 81 45.7
BolC5t30669H Brassica oleracea HOM05D000003 ORTHO05D010566 3.4e-08 62.0 86 44.2
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 4.4e-08 61.6 83 41.0
AT5G18880 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.7e-07 59.7 84 45.2
AL9U10510 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 2.2e-07 59.3 85 40.0
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-07 58.9 93 39.8
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-07 58.9 90 45.6
BraA10t42560Z Brassica rapa HOM05D000003 ORTHO05D000283 2.8e-07 58.9 88 39.8
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 3.7e-07 58.5 86 41.9
AT5G59060 Arabidopsis thaliana HOM05D000003 ORTHO05D010566 6.3e-07 57.8 86 41.9
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 8.3e-07 57.4 82 42.7
BcaB04g20911 Brassica carinata HOM05D000003 ORTHO05D000004 1.1e-06 57.0 84 41.7
BraA07t28084Z Brassica rapa HOM05D000003 ORTHO05D010566 1.1e-06 57.0 59 54.2
AL4G13920 Arabidopsis lyrata HOM05D000003 ORTHO05D010566 1.4e-06 56.6 83 41.0
BcaB04g19079 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 55.8 65 52.3
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 55.8 85 37.6
Thhalv10017934m.g Eutrema salsugineum HOM05D000003 ORTHO05D010566 2.4e-06 55.8 89 39.3
Thhalv10017884m.g Eutrema salsugineum HOM05D000003 ORTHO05D010566 3.1e-06 55.5 88 39.8
BcaC02g10935 Brassica carinata HOM05D000003 ORTHO05D039714 7.0e-06 54.3 86 40.7
C04p23510 Brassica napus HOM05D000003 ORTHO05D039714 7.0e-06 54.3 86 40.7
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 9.1e-06 53.9 63 49.2


User provided reference genes

Program Settings