Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p70220 Brassica napus HOM05D010214 ORTHO05D097111 1.2e-54 216.1 97 100.0
BcaB01g01032 Brassica carinata HOM05D000554 ORTHO05D011030 4.6e-22 107.8 55 81.8
BcaB01g01036 Brassica carinata HOM05D000554 ORTHO05D011030 6.0e-22 107.5 55 81.8
BcaB01g01068 Brassica carinata HOM05D000554 ORTHO05D011030 6.0e-22 107.5 55 81.8
BcaC01g01932 Brassica carinata HOM05D000554 ORTHO05D011030 1.8e-21 105.9 56 83.9
BcaC01g01951 Brassica carinata HOM05D000554 ORTHO05D011030 1.8e-21 105.9 56 83.9
C03p70200 Brassica napus HOM05D000554 ORTHO05D011030 1.8e-21 105.9 56 83.9
C03p70440 Brassica napus HOM05D000554 ORTHO05D011030 1.8e-21 105.9 56 83.9
BolC3t19275H Brassica oleracea HOM05D000554 ORTHO05D011030 1.8e-21 105.9 56 83.9
BolC3t19303H Brassica oleracea HOM05D000554 ORTHO05D011030 1.8e-21 105.9 56 83.9
BcaB01g01043 Brassica carinata HOM05D000554 ORTHO05D011030 3.0e-21 105.1 56 76.8
BraA06t25191Z Brassica rapa HOM05D000554 ORTHO05D011030 8.7e-21 103.6 56 82.1
BraA06t25213Z Brassica rapa HOM05D000554 ORTHO05D011030 1.1e-20 103.2 56 82.1
A06p21040 Brassica napus HOM05D000554 ORTHO05D011030 3.7e-19 98.2 56 78.6
BcaB01g01030 Brassica carinata HOM05D000554 ORTHO05D011030 1.2e-17 93.2 48 79.2
BolC3t19302H Brassica oleracea HOM05D000554 ORTHO05D011030 4.2e-15 84.7 40 87.5
Sp5g15470 Schrenkiella parvula HOM05D000554 ORTHO05D011030 4.6e-14 81.3 50 66.0
BcaC02g10453 Brassica carinata HOM05D010214 ORTHO05D012459 7.9e-14 80.5 41 87.8
C04p28770 Brassica napus HOM05D010214 ORTHO05D012459 7.9e-14 80.5 41 87.8
C09p52780 Brassica napus HOM05D000026 ORTHO05D000094 9.0e-10 67.0 41 75.6
BolC9t58147H Brassica oleracea HOM05D000026 ORTHO05D000094 9.0e-10 67.0 41 75.6
Sp4g18730 Schrenkiella parvula HOM05D000554 ORTHO05D011030 2.9e-08 62.0 58 53.4
AL6G19480 Arabidopsis lyrata HOM05D000554 ORTHO05D011030 3.8e-08 61.6 52 53.8
AT5G08730 Arabidopsis thaliana HOM05D000554 ORTHO05D011030 5.5e-07 57.8 52 50.0
Thhalv10015828m.g Eutrema salsugineum HOM05D000554 ORTHO05D011030 7.2e-07 57.4 50 48.0
CARHR204280 Cardamine hirsuta HOM05D000554 ORTHO05D011030 9.3e-07 57.0 39 56.4
Carub.0006s0770 Capsella rubella HOM05D000554 ORTHO05D011030 3.6e-06 55.1 52 48.1
Sp6g34140 Schrenkiella parvula HOM05D000554 ORTHO05D011030 3.6e-06 55.1 49 49.0


User provided reference genes

Program Settings