Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 3.1e-164 581.6 279 100.0
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.9e-132 476.1 315 77.5
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 9.5e-129 463.8 235 92.8
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 1.8e-127 459.5 250 91.2
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 8.9e-127 457.2 234 92.7
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 6.4e-125 451.1 235 91.1
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.0e-122 443.7 241 88.4
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 5.1e-122 441.4 246 86.6
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 2.8e-120 435.6 246 86.6
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 1.8e-119 433.0 234 88.9
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 5.8e-118 427.9 235 88.9
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 4.3e-113 411.8 236 86.0
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 2.4e-108 396.0 236 83.1
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 2.4e-108 396.0 236 83.1
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-108 395.6 239 79.5
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 3.2e-108 395.6 204 92.6
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 3.2e-108 395.6 239 82.0
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-107 393.3 239 79.9
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-105 387.1 243 76.1
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-105 386.7 239 78.2
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 1.1e-100 370.5 244 73.4
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 5.6e-97 358.2 235 74.9
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 7.4e-97 357.8 232 75.4
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-96 356.7 237 70.9
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 3.7e-96 355.5 237 70.5
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 4.8e-96 355.1 237 70.5
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 2.4e-95 352.8 237 70.5
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-94 349.7 238 75.2
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-93 347.1 239 72.4
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 1.4e-92 343.6 209 77.0
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 4.6e-91 338.6 235 69.8
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 4.6e-91 338.6 211 77.3
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 1.0e-90 337.4 235 69.4
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 3.0e-90 335.9 209 77.0
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 2.5e-89 332.8 211 75.4
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-87 327.0 236 65.7
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 6.5e-85 318.2 235 64.7
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 1.4e-84 317.0 236 65.7
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-84 315.8 237 64.1
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-83 313.2 237 64.6
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 2.1e-83 313.2 245 67.8
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 2.7e-83 312.8 236 64.8
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-83 312.4 235 64.7
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 1.0e-82 310.8 201 75.1
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 6.7e-82 308.1 236 67.8
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 8.7e-82 307.8 243 62.6
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.3e-80 303.9 235 66.0
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 9.1e-79 297.7 232 62.1
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 1.2e-75 287.3 138 97.8
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 6.7e-74 281.6 151 89.4
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 1.5e-73 280.4 236 59.3
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 2.0e-73 280.0 236 59.3
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 4.4e-73 278.9 235 59.1
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 5.3e-71 271.9 223 63.7
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 3.0e-66 256.1 210 59.0
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 4.8e-64 248.8 183 66.7
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 7.0e-63 245.0 233 54.9
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 7.0e-63 245.0 233 54.9
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 9.1e-63 244.6 182 68.1
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 1.6e-62 243.8 182 67.6
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 2.6e-62 243.0 151 77.5
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 5.9e-62 241.9 128 90.6
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-61 241.1 143 76.9
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 7.2e-60 235.0 167 66.5
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 7.2e-60 235.0 167 65.9
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 1.2e-59 234.2 167 66.5
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 1.6e-59 233.8 158 72.8
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 2.1e-59 233.4 167 65.9
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 2.7e-59 233.0 197 64.5
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 4.7e-59 232.3 168 66.7
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 1.4e-58 230.7 167 65.3
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 1.8e-58 230.3 147 76.2
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 5.2e-58 228.8 167 64.7
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 2.6e-57 226.5 183 65.6
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 5.7e-57 225.3 150 74.0
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 7.5e-57 224.9 167 64.1
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 1.7e-56 223.8 210 53.3
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-55 220.3 177 61.6
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 4.1e-55 219.2 235 51.1
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 4.1e-55 219.2 189 60.3
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 9.1e-55 218.0 235 51.1
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 1.0e-53 214.5 235 50.6
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 4.0e-50 202.6 124 80.6
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 5.2e-50 202.2 236 48.7
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 2.0e-49 200.3 142 69.0
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 2.0e-49 200.3 124 79.8
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 5.7e-49 198.7 134 72.4
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 1.3e-48 197.6 167 63.5
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 1.7e-48 197.2 126 74.6
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 4.8e-48 195.7 160 62.5
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 6.3e-48 195.3 138 68.1
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 8.3e-48 194.9 138 65.2
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 2.7e-46 189.9 237 44.7
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 5.9e-46 188.7 234 50.0
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 5.9e-46 188.7 138 63.8
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 7.7e-46 188.3 95 92.6
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 7.7e-46 188.3 138 63.0
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 8.6e-45 184.9 138 62.3
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 1.1e-44 184.5 138 62.3
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 2.5e-44 183.3 125 76.0
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 5.5e-44 182.2 95 88.4
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 7.2e-44 181.8 138 61.6
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 1.6e-43 180.6 95 88.4
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 8.8e-42 174.9 139 62.6
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 8.8e-42 174.9 139 62.6
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 4.4e-41 172.6 95 81.1
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 4.4e-41 172.6 95 81.1
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 2.0e-38 163.7 148 55.4
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 1.3e-37 161.0 168 52.4
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 1.3e-37 161.0 168 52.4
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 2.9e-37 159.8 168 53.0
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 2.9e-37 159.8 168 53.0
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 6.6e-37 158.7 118 61.9
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 6.6e-37 158.7 122 68.0
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 8.6e-37 158.3 112 69.6
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 2.5e-36 156.8 85 88.2
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 3.3e-36 156.4 235 41.7
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 4.3e-36 156.0 235 41.7
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 6.1e-35 152.1 118 63.6
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-34 149.8 101 66.3
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 6.8e-34 148.7 184 47.8
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 6.8e-34 148.7 184 47.8
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 1.7e-32 144.1 83 79.5
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 1.8e-31 140.6 78 82.1
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 5.9e-30 135.6 93 71.0
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 7.8e-30 135.2 95 69.5
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.5e-28 131.0 100 65.0
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 3.3e-28 129.8 66 90.9
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 9.5e-28 128.3 77 71.4
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-26 124.0 237 32.5
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 1.8e-26 124.0 82 73.2
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 2.3e-26 123.6 88 67.0
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 3.1e-26 123.2 105 61.9
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 6.8e-26 122.1 116 54.3
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 2.0e-25 120.6 93 65.6
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 1.9e-23 114.0 90 63.3
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 5.4e-23 112.5 72 68.1
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 2.0e-22 110.5 70 74.3
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 2.0e-22 110.5 70 74.3
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 2.0e-22 110.5 86 61.6
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 5.0e-21 105.9 84 60.7
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 1.6e-19 100.9 89 61.8
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 8.1e-19 98.6 76 65.8
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 8.9e-18 95.1 63 77.8
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 3.4e-17 93.2 121 44.6
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 9.9e-17 91.7 118 42.4
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 1.3e-16 91.3 71 64.8
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 1.3e-16 91.3 121 44.6
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 1.9e-15 87.4 94 47.9
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 3.2e-15 86.7 68 63.2
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 4.1e-15 86.3 72 59.7
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 9.2e-15 85.1 47 78.7
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 7.8e-14 82.0 79 53.2
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 8.6e-13 78.6 51 72.5
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 1.1e-12 78.2 64 60.9
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 3.3e-12 76.6 50 68.0
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 1.5e-09 67.8 39 76.9
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 5.8e-09 65.9 115 40.0
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 1.9e-07 60.8 124 28.2
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 2.4e-07 60.5 124 27.4
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 2.7e-06 57.0 52 51.9


User provided reference genes

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