Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p69550 Brassica napus HOM05D008324 ORTHO05D010603 3.1e-53 211.5 100 100.0
BolC3t19210H Brassica oleracea HOM05D008324 ORTHO05D010603 3.1e-53 211.5 100 100.0
BcaC01g02011 Brassica carinata HOM05D008324 ORTHO05D010603 1.5e-39 166.0 77 100.0
A06p21710 Brassica napus HOM05D008324 ORTHO05D010603 3.3e-39 164.9 77 98.7
BraA06t25262Z Brassica rapa HOM05D008324 ORTHO05D010603 3.3e-39 164.9 77 98.7
BcaB01g01143 Brassica carinata HOM05D008324 ORTHO05D010603 1.0e-32 143.3 78 87.2
Sp5g16470 Schrenkiella parvula HOM05D008324 ORTHO05D010603 1.5e-28 129.4 91 65.9
Thhalv10002746m.g Eutrema salsugineum HOM05D008324 ORTHO05D010603 6.4e-27 124.0 90 67.8
AT3G44718 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 3.6e-22 108.2 66 68.2
Carub.0005s1039 Capsella rubella HOM05D008324 ORTHO05D010603 4.8e-22 107.8 87 60.9
AL5G22910 Arabidopsis lyrata HOM05D008324 ORTHO05D010603 8.1e-22 107.1 66 68.2
AT2G20605 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 1.1e-13 80.1 87 46.0
Sp3g33860 Schrenkiella parvula HOM05D008324 ORTHO05D010603 1.2e-12 76.6 88 40.9
AT2G20618 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 5.8e-12 74.3 88 42.0
AT2G20619 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 5.8e-12 74.3 66 47.0
BcaC06g35572 Brassica carinata HOM05D008324 ORTHO05D010603 1.3e-11 73.2 62 53.2
C07p13390 Brassica napus HOM05D008324 ORTHO05D010603 1.3e-11 73.2 62 53.2
A07p08580 Brassica napus HOM05D008324 ORTHO05D010603 1.7e-11 72.8 62 53.2
Carub.0003s3513 Capsella rubella HOM05D008324 ORTHO05D010603 1.7e-11 72.8 66 47.0
BcaB02g10879 Brassica carinata HOM05D008324 ORTHO05D010603 2.2e-11 72.4 62 48.4
BraA07t28647Z Brassica rapa HOM05D008324 ORTHO05D010603 4.9e-11 71.2 61 49.2
BcaC06g36752 Brassica carinata HOM05D008324 ORTHO05D010603 1.9e-10 69.3 71 42.3
A09p58790 Brassica napus HOM05D008324 ORTHO05D010603 1.9e-10 69.3 83 42.2
BolC7t40485H Brassica oleracea HOM05D008324 ORTHO05D010603 1.9e-10 69.3 71 42.3
C07p00360 Brassica napus HOM05D008324 ORTHO05D010603 2.5e-10 68.9 61 47.5
BcaC07g41202 Brassica carinata HOM05D008324 ORTHO05D010603 4.2e-10 68.2 62 48.4
A07p00140 Brassica napus HOM05D008324 ORTHO05D010603 4.2e-10 68.2 61 47.5
BraA07t27808Z Brassica rapa HOM05D008324 ORTHO05D010603 4.2e-10 68.2 61 47.5
BcaB03g16856 Brassica carinata HOM05D008324 ORTHO05D010603 5.5e-10 67.8 61 45.9
Aa31LG10G4750 Aethionema arabicum HOM05D008324 ORTHO05D010603 1.2e-09 66.6 61 47.5
Carub.0003s3512 Capsella rubella HOM05D008324 ORTHO05D010603 1.2e-09 66.6 55 54.5
Aa31LG10G4730 Aethionema arabicum HOM05D008324 ORTHO05D010603 2.1e-09 65.9 61 49.2
C07p00380 Brassica napus HOM05D008324 ORTHO05D010603 2.1e-09 65.9 66 42.4
BolC7t40487H Brassica oleracea HOM05D008324 ORTHO05D010603 2.1e-09 65.9 66 42.4
Carub.0003s3511 Capsella rubella HOM05D008324 ORTHO05D010603 2.7e-09 65.5 61 50.8
Thhalv10002242m.g Eutrema salsugineum HOM05D008324 ORTHO05D010603 2.7e-09 65.5 62 46.8
BraA09t41265Z Brassica rapa HOM05D008324 ORTHO05D010603 3.5e-09 65.1 83 39.8
AT2G20595 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 4.6e-09 64.7 61 47.5
Carub.0003s3509 Capsella rubella HOM05D008324 ORTHO05D010603 6.0e-09 64.3 54 53.7
Carub.0003s3510 Capsella rubella HOM05D008324 ORTHO05D010603 6.0e-09 64.3 52 55.8
CARHR111200 Cardamine hirsuta HOM05D008324 ORTHO05D010603 6.0e-09 64.3 61 47.5
BcaB08g34931 Brassica carinata HOM05D008324 ORTHO05D010603 1.3e-08 63.2 66 47.0
Thhalv10012145m.g Eutrema salsugineum HOM05D008324 ORTHO05D010603 1.8e-08 62.8 76 43.4
BolC7t40483H Brassica oleracea HOM05D008324 ORTHO05D010603 3.3e-07 58.5 78 37.2
C07p00340 Brassica napus HOM05D008324 ORTHO05D010603 4.3e-07 58.2 71 42.3
BcaB08g34924 Brassica carinata HOM05D008324 ORTHO05D010603 1.3e-06 56.6 79 39.2
BcaB08g34925 Brassica carinata HOM05D008324 ORTHO05D010603 1.3e-06 56.6 79 39.2
Carub.0002s0841 Capsella rubella HOM05D008324 ORTHO05D010603 2.8e-06 55.5 54 50.0
BcaB08g34923 Brassica carinata HOM05D008324 ORTHO05D010603 6.2e-06 54.3 62 41.9


User provided reference genes

Program Settings