Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p69260 Brassica napus HOM05D007011 ORTHO05D008837 4.9e-38 160.6 79 100.0
BcaC06g36116 Brassica carinata HOM05D007011 ORTHO05D008837 8.9e-32 139.8 77 89.6
BolC3t19184H Brassica oleracea HOM05D007011 ORTHO05D008837 1.7e-30 135.6 66 100.0
BcaB04g16982 Brassica carinata HOM05D007011 ORTHO05D008837 3.6e-25 117.9 79 75.9
BcaB04g17596 Brassica carinata HOM05D007011 ORTHO05D008837 3.6e-25 117.9 79 75.9
C06p11410 Brassica napus HOM05D007011 ORTHO05D008837 9.0e-24 113.2 64 84.4
BcaB01g01369 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-23 112.8 79 72.2
BcaB01g01187 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-23 112.5 79 73.4
C04p47830 Brassica napus HOM05D007011 ORTHO05D008837 2.6e-23 111.7 74 70.3
C07p11040 Brassica napus HOM05D007011 ORTHO05D008837 2.6e-23 111.7 74 70.3
C07p11970 Brassica napus HOM05D007011 ORTHO05D008837 3.4e-23 111.3 73 71.2
C06p04860 Brassica napus HOM05D007011 ORTHO05D008837 4.4e-23 110.9 74 70.3
C03p58260 Brassica napus HOM05D007011 ORTHO05D008837 9.9e-23 109.8 74 68.9
BcaC05g28456 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-22 109.4 74 68.9
BolC5t33266H Brassica oleracea HOM05D007011 ORTHO05D008837 1.3e-22 109.4 74 68.9
C05p27360 Brassica napus HOM05D007011 ORTHO05D008837 2.9e-22 108.2 74 68.9
A07p05900 Brassica napus HOM05D007011 ORTHO05D008837 4.9e-22 107.5 74 67.6
BolC6t35445H Brassica oleracea HOM05D007011 ORTHO05D008837 4.9e-22 107.5 74 67.6
BraA06t25341Z Brassica rapa HOM05D007011 ORTHO05D008837 4.9e-22 107.5 74 67.6
C04p55380 Brassica napus HOM05D007011 ORTHO05D008837 6.4e-22 107.1 74 67.6
BcaC05g27620 Brassica carinata HOM05D007011 ORTHO05D008837 8.4e-22 106.7 74 67.6
C05p36090 Brassica napus HOM05D007011 ORTHO05D008837 8.4e-22 106.7 74 67.6
BcaB05g24511 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-20 102.4 70 72.9
BcaB01g01570 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-19 99.4 66 75.8
BcaB01g01041 Brassica carinata HOM05D007011 ORTHO05D008837 7.3e-18 93.6 66 74.2
BcaB06g27203 Brassica carinata HOM05D007011 ORTHO05D008837 9.6e-18 93.2 68 69.1
C01p45340 Brassica napus HOM05D007011 ORTHO05D008837 2.8e-17 91.7 70 61.4
BcaB03g15265 Brassica carinata HOM05D007011 ORTHO05D008837 4.0e-16 87.8 70 62.9
BcaB06g27941 Brassica carinata HOM05D007011 ORTHO05D008837 9.0e-16 86.7 66 68.2
BraSC37t46121Z Brassica rapa HOM05D007011 ORTHO05D008837 9.0e-16 86.7 61 68.9
BcaB07g33137 Brassica carinata HOM05D007011 ORTHO05D008837 5.8e-15 84.0 53 77.4
BcaB05g22953 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-14 82.8 64 67.2
BcaC05g25371 Brassica carinata HOM05D007011 ORTHO05D008837 9.3e-13 76.6 70 54.3
BcaC06g36176 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-12 75.9 50 68.0
BcaC08g45131 Brassica carinata HOM05D007011 ORTHO05D008837 3.5e-12 74.7 72 52.8
C01p11610 Brassica napus HOM05D007011 ORTHO05D008837 4.6e-12 74.3 70 52.9
C07p51970 Brassica napus HOM05D007011 ORTHO05D008837 4.6e-12 74.3 72 54.2
BcaC01g00089 Brassica carinata HOM05D007011 ORTHO05D008837 7.9e-12 73.6 70 51.4
BcaC02g07935 Brassica carinata HOM05D007011 ORTHO05D008837 7.9e-12 73.6 70 52.9
BcaB01g01156 Brassica carinata HOM05D007011 ORTHO05D008837 1.0e-11 73.2 74 54.1
BcaC03g17624 Brassica carinata HOM05D007011 ORTHO05D008837 1.0e-11 73.2 72 52.8
BcaC01g01763 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-11 72.8 69 52.2
BcaC05g28767 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-11 72.8 72 51.4
BcaNung02468 Brassica carinata HOM05D007011 ORTHO05D008837 1.8e-11 72.4 74 50.0
BolC3t21008H Brassica oleracea HOM05D007011 ORTHO05D008837 3.0e-11 71.6 70 51.4
C05p14820 Brassica napus HOM05D007011 ORTHO05D008837 8.7e-11 70.1 72 51.4
C06p40070 Brassica napus HOM05D007011 ORTHO05D008837 8.7e-11 70.1 72 51.4
BcaC04g18660 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-10 69.3 70 48.6
BolC5t31113H Brassica oleracea HOM05D007011 ORTHO05D008837 1.9e-10 68.9 70 48.6
BcaC05g26483 Brassica carinata HOM05D007011 ORTHO05D008837 2.5e-10 68.6 40 82.5
BcaB07g32280 Brassica carinata HOM05D007011 ORTHO05D008837 3.3e-10 68.2 74 51.4
BcaC06g34312 Brassica carinata HOM05D007011 ORTHO05D008837 7.4e-10 67.0 70 50.0
BcaC07g37533 Brassica carinata HOM05D007011 ORTHO05D008837 9.6e-10 66.6 70 48.6
BcaC06g35773 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-09 65.9 43 69.8
BcaC03g15015 Brassica carinata HOM05D007011 ORTHO05D008837 3.7e-09 64.7 65 49.2
BcaC08g44613 Brassica carinata HOM05D007011 ORTHO05D008837 4.8e-09 64.3 47 63.8
BolC8t48311H Brassica oleracea HOM05D007011 ORTHO05D008837 6.2e-09 63.9 51 56.9
BcaB01g01608 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-08 63.2 63 52.4
BcaC02g12297 Brassica carinata HOM05D007011 ORTHO05D008837 1.8e-08 62.4 74 44.6
A02p25900 Brassica napus HOM05D007011 ORTHO05D042806 6.9e-08 60.5 56 50.0
BolC2t10145H Brassica oleracea HOM05D007011 ORTHO05D042806 2.2e-06 55.5 56 46.4


User provided reference genes

Program Settings