Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p69230 Brassica napus HOM05D001224 ORTHO05D042758 2.9e-140 501.9 252 100.0
BolC3t19180H Brassica oleracea HOM05D001224 ORTHO05D042758 2.9e-76 289.3 157 92.4
BcaC06g36017 Brassica carinata HOM05D001224 ORTHO05D016739 2.6e-24 116.7 78 78.2
C07p08900 Brassica napus HOM05D001224 ORTHO05D016739 5.8e-24 115.5 74 75.7
BolC7t41304H Brassica oleracea HOM05D001224 ORTHO05D016739 5.8e-24 115.5 74 75.7
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 1.0e-20 104.8 199 36.2
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 7.5e-16 88.6 94 48.9
BcaC06g36430 Brassica carinata HOM05D001224 ORTHO05D039145 9.2e-14 81.6 65 64.6
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 1.6e-13 80.9 171 35.1
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 1.6e-13 80.9 135 37.8
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 4.6e-13 79.3 99 44.4
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 4.6e-13 79.3 174 35.1
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 1.2e-10 71.2 166 33.1
BcaB08g35157 Brassica carinata HOM05D001224 ORTHO05D010571 4.7e-10 69.3 73 52.1
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 1.8e-09 67.4 85 41.2
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 3.1e-09 66.6 73 43.8
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 4.0e-09 66.2 73 43.8
BraA07t28343Z Brassica rapa HOM05D001224 ORTHO05D016739 5.2e-09 65.9 36 83.3
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 6.8e-09 65.5 64 45.3
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 8.9e-09 65.1 47 57.4
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.2e-08 64.7 76 42.1
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 1.5e-08 64.3 90 38.9
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 1.5e-08 64.3 73 42.5
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 1.5e-08 64.3 73 41.1
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 2.0e-08 63.9 50 62.0
BolC1t04759H Brassica oleracea HOM05D001224 ORTHO05D010571 3.4e-08 63.2 79 43.0
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 4.4e-08 62.8 44 59.1
A09p21550 Brassica napus HOM05D023185 ORTHO05D012331 4.4e-08 62.8 50 56.0
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 4.4e-08 62.8 47 70.2
BraA09t37754Z Brassica rapa HOM05D001224 ORTHO05D012331 4.4e-08 62.8 50 56.0
BolC4t22579H Brassica oleracea HOM05D002776 ORTHO05D024276 7.6e-08 62.0 87 40.2
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 1.3e-07 61.2 44 59.1
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 1.7e-07 60.8 108 38.0
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 2.9e-07 60.1 73 41.1
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 2.9e-07 60.1 108 38.0
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 2.9e-07 60.1 75 42.7
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 3.7e-07 59.7 50 54.0
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 4.9e-07 59.3 59 47.5
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 4.9e-07 59.3 59 49.2
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 4.9e-07 59.3 99 36.4
C09p33020 Brassica napus HOM05D000675 ORTHO05D000395 4.9e-07 59.3 37 78.4
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 6.4e-07 58.9 294 27.2
BcaC01g02361 Brassica carinata HOM05D001224 ORTHO05D016739 6.4e-07 58.9 31 83.9
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 6.4e-07 58.9 108 38.0
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 8.3e-07 58.5 108 37.0
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 1.1e-06 58.2 185 27.0
BcaC05g27629 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-06 58.2 59 47.5
BcaC05g27713 Brassica carinata HOM05D001224 ORTHO05D024276 1.1e-06 58.2 63 52.4
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 1.1e-06 58.2 59 47.5
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 1.1e-06 58.2 108 37.0
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 1.1e-06 58.2 59 47.5
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 1.1e-06 58.2 108 37.0
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 1.1e-06 58.2 44 56.8
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 1.1e-06 58.2 108 37.0
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 1.4e-06 57.8 108 37.0
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 1.4e-06 57.8 113 38.1
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 1.9e-06 57.4 216 24.5
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 1.9e-06 57.4 100 36.0
C04p55410 Brassica napus HOM05D001224 ORTHO05D010571 1.9e-06 57.4 100 37.0
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 3.2e-06 56.6 158 29.7
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 3.2e-06 56.6 108 36.1
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 4.1e-06 56.2 108 36.1
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 5.4e-06 55.8 59 44.1
BolC5t31762H Brassica oleracea HOM05D001224 ORTHO05D010571 5.4e-06 55.8 59 45.8
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 5.4e-06 55.8 99 37.4
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 5.4e-06 55.8 108 36.1
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 7.1e-06 55.5 99 37.4
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 9.2e-06 55.1 59 45.8
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 9.2e-06 55.1 59 45.8
C07p06970 Brassica napus HOM05D001224 ORTHO05D010571 9.2e-06 55.1 108 36.1
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 9.2e-06 55.1 70 42.9


User provided reference genes

Program Settings