Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p68800 Brassica napus HOM05D004175 ORTHO05D004664 6.1e-28 126.7 62 100.0
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 6.1e-28 126.7 62 100.0
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 2.3e-27 124.8 62 98.4
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 9.2e-24 112.8 59 89.8
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 9.2e-24 112.8 59 89.8
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 9.2e-24 112.8 59 89.8
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 9.2e-24 112.8 59 89.8
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 1.2e-23 112.5 56 94.6
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 8.6e-22 106.3 65 81.5
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 1.2e-20 102.4 56 87.5
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 3.6e-20 100.9 56 85.7
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 6.2e-20 100.1 55 85.5
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 1.8e-19 98.6 56 83.9
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 1.8e-19 98.6 56 83.9
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-19 98.6 56 83.9
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-19 98.6 56 83.9
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 1.8e-19 98.6 56 83.9
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 1.8e-19 98.6 56 83.9
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 3.1e-19 97.8 56 82.1
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 6.8e-19 96.7 56 82.1
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 8.9e-19 96.3 56 80.4
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 1.2e-18 95.9 56 82.1
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 2.6e-18 94.7 62 79.0
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 2.2e-17 91.7 55 74.5
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 4.9e-17 90.5 55 76.4
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 1.4e-16 89.0 55 72.7
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 1.9e-16 88.6 58 69.0
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 2.0e-15 85.1 58 63.8
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 2.7e-15 84.7 58 67.2
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 3.5e-15 84.3 58 67.2
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 7.8e-15 83.2 55 70.9
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 1.3e-14 82.4 55 69.1
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 2.3e-14 81.6 49 81.6
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 3.9e-14 80.9 55 69.1
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 5.0e-14 80.5 58 65.5
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 1.1e-13 79.3 58 62.1
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 3.3e-13 77.8 58 58.6
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 3.3e-13 77.8 58 58.6
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 3.3e-13 77.8 58 62.1
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 1.2e-12 75.9 58 62.1
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 2.1e-12 75.1 55 63.6
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 3.6e-12 74.3 35 100.0
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 1.1e-11 72.8 56 64.3
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 1.1e-11 72.8 56 64.3
BolC4t22068H Brassica oleracea HOM05D004175 ORTHO05D004664 1.4e-11 72.4 39 84.6
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-11 72.0 56 64.3
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 5.2e-11 70.5 59 59.3
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 6.8e-11 70.1 58 56.9
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 6.8e-11 70.1 55 61.8
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 4.4e-10 67.4 56 55.4
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 9.8e-10 66.2 55 58.2
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 1.3e-09 65.9 59 57.6
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 1.3e-09 65.9 88 45.5
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 3.7e-09 64.3 58 56.9
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 3.7e-09 64.3 58 56.9
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 4.9e-09 63.9 55 54.5
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.9e-09 63.9 58 50.0
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 6.4e-09 63.5 42 66.7
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 6.4e-09 63.5 57 54.4
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 6.4e-09 63.5 56 58.9
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 2.4e-08 61.6 55 56.4
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 4.1e-08 60.8 56 57.1
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 5.4e-08 60.5 39 64.1
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 7.1e-08 60.1 36 72.2
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 7.1e-08 60.1 31 80.6
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 9.2e-08 59.7 56 55.4
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 9.2e-08 59.7 56 55.4
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 1.6e-07 58.9 55 52.7
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.6e-07 58.9 58 48.3
MBI04_g44954_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 2.3e-06 55.1 55 47.3
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.0e-06 54.7 55 50.9
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.0e-06 54.7 55 50.9
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.0e-06 54.7 55 50.9
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 3.9e-06 54.3 58 48.3
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 5.1e-06 53.9 56 51.8
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 5.1e-06 53.9 30 73.3
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 5.1e-06 53.9 32 71.9
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 5.1e-06 53.9 55 50.9


User provided reference genes

Program Settings