Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p68640 Brassica napus HOM05D002947 ORTHO05D097826 6.9e-44 180.3 91 100.0
AL5G39550 Arabidopsis lyrata HOM05D002947 ORTHO05D003447 3.2e-09 65.1 43 76.7
AT3G57890 Arabidopsis thaliana HOM05D002947 ORTHO05D003447 3.2e-09 65.1 43 76.7
CARHR168200 Cardamine hirsuta HOM05D002947 ORTHO05D003447 3.2e-09 65.1 43 76.7
Thhalv10005862m.g Eutrema salsugineum HOM05D002947 ORTHO05D003447 3.2e-09 65.1 43 76.7
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 5.5e-09 64.3 63 58.7
Sp5g04830 Schrenkiella parvula HOM05D002947 ORTHO05D003447 5.5e-09 64.3 59 57.6
BcaB02g07568 Brassica carinata HOM05D002947 ORTHO05D003447 9.4e-09 63.5 83 45.8
A04p02870 Brassica napus HOM05D002947 ORTHO05D003447 1.6e-08 62.8 55 58.2
BraA04t16010Z Brassica rapa HOM05D002947 ORTHO05D003447 1.6e-08 62.8 55 58.2
Carub.0005s2474 Capsella rubella HOM05D002947 ORTHO05D003447 1.6e-08 62.8 43 72.1
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 2.1e-08 62.4 72 51.4
BraA07t30024Z Brassica rapa HOM05D002947 ORTHO05D003447 2.1e-08 62.4 72 51.4
BcaC08g44876 Brassica carinata HOM05D002947 ORTHO05D003447 3.6e-08 61.6 72 51.4
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 3.6e-08 61.6 72 51.4
BcaC02g09969 Brassica carinata HOM05D002947 ORTHO05D003447 4.7e-08 61.2 83 43.4
C04p34480 Brassica napus HOM05D002947 ORTHO05D003447 4.7e-08 61.2 83 43.4
BolC4t25010H Brassica oleracea HOM05D002947 ORTHO05D003447 4.7e-08 61.2 83 43.4
Aa31LG10G12600 Aethionema arabicum HOM05D002947 ORTHO05D003447 6.1e-08 60.8 72 50.0
BcaC07g40162 Brassica carinata HOM05D002947 ORTHO05D003447 1.0e-07 60.1 55 56.4
BcaC07g40331 Brassica carinata HOM05D002947 ORTHO05D003447 1.0e-07 60.1 44 68.2
BcaNung06935 Brassica carinata HOM05D002947 ORTHO05D003447 1.0e-07 60.1 55 56.4
C08p33460 Brassica napus HOM05D002947 ORTHO05D003447 1.0e-07 60.1 44 68.2
BolC8t50944H Brassica oleracea HOM05D002947 ORTHO05D003447 1.0e-07 60.1 44 68.2
BcaB02g08290 Brassica carinata HOM05D002947 ORTHO05D003447 1.4e-07 59.7 44 68.2
THA.LOC104819801 Tarenaya hassleriana HOM05D002947 ORTHO05D003447 1.4e-07 59.7 44 65.9
Potri.006G059100 Populus trichocarpa HOM05D002947 ORTHO05D003447 1.8e-07 59.3 71 52.1
Sabra06G0042500 Salix brachista HOM05D002947 ORTHO05D003447 2.3e-07 58.9 71 50.7
A09p50750 Brassica napus HOM05D002947 ORTHO05D003447 3.0e-07 58.5 44 65.9
Gohir.A04G058700 Gossypium hirsutum HOM05D002947 ORTHO05D003447 3.0e-07 58.5 42 69.0
Gohir.D04G088800 Gossypium hirsutum HOM05D002947 ORTHO05D003447 3.0e-07 58.5 42 69.0
Gorai.013G212400 Gossypium raimondii HOM05D002947 ORTHO05D003447 3.0e-07 58.5 42 69.0
BraA09t40522Z Brassica rapa HOM05D002947 ORTHO05D003447 5.1e-07 57.8 42 69.0
CARHR137270 Cardamine hirsuta HOM05D002947 ORTHO05D003447 5.1e-07 57.8 72 47.2
AL4G40590 Arabidopsis lyrata HOM05D002947 ORTHO05D003447 6.7e-07 57.4 72 47.2
BraA05t19271Z Brassica rapa HOM05D002947 ORTHO05D003447 1.5e-06 56.2 72 44.4
Thhalv10016442m.g Eutrema salsugineum HOM05D002947 ORTHO05D003447 1.5e-06 56.2 72 45.8
BcaC02g12470 Brassica carinata HOM05D002947 ORTHO05D003447 2.0e-06 55.8 44 61.4
C04p03380 Brassica napus HOM05D002947 ORTHO05D003447 2.0e-06 55.8 44 61.4
Duzib093G0113 Durio zibethinus HOM05D002947 ORTHO05D003447 2.6e-06 55.5 42 69.0
ClCG04G002320 Citrullus lanatus HOM05D002947 ORTHO05D003447 3.3e-06 55.1 64 53.1
CsaV3_4G030440 Cucumis sativus L. HOM05D002947 ORTHO05D003447 3.3e-06 55.1 70 52.9
Duzib106G0869 Durio zibethinus HOM05D002947 ORTHO05D003447 3.3e-06 55.1 42 69.0
Duzib128G1407 Durio zibethinus HOM05D002947 ORTHO05D003447 3.3e-06 55.1 44 63.6
Atru.chr6.1978 Acer truncatum HOM05D002947 ORTHO05D003447 4.4e-06 54.7 53 64.2
BcaNung04401 Brassica carinata HOM05D002947 ORTHO05D003447 4.4e-06 54.7 55 52.7
A05p02790 Brassica napus HOM05D002947 ORTHO05D003447 4.4e-06 54.7 72 44.4
BolC4t21975H Brassica oleracea HOM05D002947 ORTHO05D003447 4.4e-06 54.7 72 44.4
Carub.0004s2457 Capsella rubella HOM05D002947 ORTHO05D003447 5.7e-06 54.3 72 44.4
MELO3C008901.2 Cucumis melo HOM05D002947 ORTHO05D003447 5.7e-06 54.3 70 51.4
THA.LOC104802444 Tarenaya hassleriana HOM05D002947 ORTHO05D003447 5.7e-06 54.3 42 66.7
CANSAT64G0379 Cannabis sativa HOM05D002947 ORTHO05D003447 7.4e-06 53.9 42 59.5
Cpa.g.sc85.91 Carica papaya HOM05D002947 ORTHO05D003447 7.4e-06 53.9 42 66.7
Ciclev10031101m.g Citrus clementina HOM05D002947 ORTHO05D003447 7.4e-06 53.9 60 46.7
THA.LOC104824463 Tarenaya hassleriana HOM05D002947 ORTHO05D003447 7.4e-06 53.9 48 58.3
Gohir.D01G126200 Gossypium hirsutum HOM05D002947 ORTHO05D003447 9.7e-06 53.5 44 59.1
Gorai.002G156800 Gossypium raimondii HOM05D002947 ORTHO05D003447 9.7e-06 53.5 44 59.1
Sp4g24410 Schrenkiella parvula HOM05D002947 ORTHO05D003447 9.7e-06 53.5 72 45.8


User provided reference genes

Program Settings