Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 6.7e-78 293.9 142 100.0
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.5e-45 186.4 93 97.8
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 5.2e-30 134.8 90 76.7
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 6.7e-30 134.4 90 76.7
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 6.7e-30 134.4 90 76.7
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 6.7e-30 134.4 90 76.7
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.5e-29 133.3 90 74.4
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.5e-29 133.3 90 74.4
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.5e-29 133.3 90 75.6
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.5e-29 133.3 90 75.6
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 1.5e-29 133.3 90 74.4
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.5e-29 133.3 90 76.7
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 3.3e-29 132.1 90 74.4
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.7e-28 129.8 90 73.3
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 3.7e-28 128.6 90 73.3
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 4.1e-27 125.2 90 71.1
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 3.5e-26 122.1 90 67.8
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 3.5e-26 122.1 90 67.8
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 5.9e-26 121.3 90 67.8
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 5.9e-26 121.3 90 67.8
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 5.9e-26 121.3 90 67.8
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 7.7e-26 120.9 90 67.8
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 7.7e-26 120.9 90 67.8
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 7.7e-26 120.9 90 68.9
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 7.7e-26 120.9 90 67.8
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.3e-25 120.2 90 67.8
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 2.2e-25 119.4 90 66.7
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 2.9e-25 119.0 90 66.7
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 2.9e-25 119.0 89 65.2
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 2.9e-25 119.0 90 66.7
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 3.8e-25 118.6 90 66.7
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 3.8e-25 118.6 90 65.6
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 3.8e-25 118.6 90 67.8
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 3.8e-25 118.6 90 67.8
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 3.8e-25 118.6 90 67.8
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 3.8e-25 118.6 90 67.8
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 5.0e-25 118.2 90 67.8
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 5.0e-25 118.2 90 65.6
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 5.0e-25 118.2 90 65.6
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 6.5e-25 117.9 90 65.6
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 6.5e-25 117.9 90 65.6
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 6.5e-25 117.9 90 65.6
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 6.5e-25 117.9 90 64.4
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 6.5e-25 117.9 90 64.4
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 6.5e-25 117.9 90 67.8
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 8.5e-25 117.5 90 64.4
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 8.5e-25 117.5 90 67.8
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 8.5e-25 117.5 90 67.8
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 8.5e-25 117.5 90 65.6
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 8.5e-25 117.5 90 66.7
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.1e-24 117.1 90 67.8
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.5e-24 116.7 90 63.3
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.5e-24 116.7 90 63.3
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 1.5e-24 116.7 90 66.7
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.5e-24 116.7 89 66.3
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.9e-24 116.3 89 66.3
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.9e-24 116.3 89 66.3
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.9e-24 116.3 90 64.4
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.9e-24 116.3 90 65.6
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.9e-24 116.3 90 64.4
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.5e-24 115.9 90 64.4
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.5e-24 115.9 90 66.7
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.5e-24 115.9 90 66.7
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 3.2e-24 115.5 89 64.0
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.2e-24 115.5 90 64.4
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 4.2e-24 115.2 89 66.3
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 5.5e-24 114.8 89 64.0
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 5.5e-24 114.8 90 65.6
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 5.5e-24 114.8 89 64.0
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 5.5e-24 114.8 89 65.2
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 5.5e-24 114.8 90 62.2
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 7.2e-24 114.4 89 62.9
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 7.2e-24 114.4 89 62.9
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 7.2e-24 114.4 89 64.0
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 9.4e-24 114.0 90 64.4
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 9.4e-24 114.0 90 63.3
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 1.2e-23 113.6 89 60.7
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 1.2e-23 113.6 89 64.0
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.6e-23 113.2 89 62.9
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.6e-23 113.2 90 64.4
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 2.1e-23 112.8 89 61.8
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 2.1e-23 112.8 89 61.8
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 2.7e-23 112.5 89 61.8
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 2.7e-23 112.5 89 60.7
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 2.7e-23 112.5 90 62.2
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.6e-23 112.1 90 63.3
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 3.6e-23 112.1 89 61.8
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 4.7e-23 111.7 90 61.1
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 4.7e-23 111.7 90 63.3
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 4.7e-23 111.7 90 64.4
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.7e-23 111.7 90 64.4
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 4.7e-23 111.7 89 61.8
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 6.1e-23 111.3 89 61.8
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.4e-22 110.2 89 59.6
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.4e-22 110.2 90 62.2
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 1.4e-22 110.2 91 58.2
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.8e-22 109.8 89 62.9
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.8e-22 109.8 89 60.7
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 4.0e-22 108.6 89 61.8
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 4.0e-22 108.6 90 62.2
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 5.2e-22 108.2 90 58.9
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 5.2e-22 108.2 91 58.2
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.5e-21 106.7 84 65.5
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.0e-21 106.3 91 57.1
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.6e-21 105.9 94 56.4
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 3.4e-21 105.5 90 61.1
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 7.5e-21 104.4 90 55.6
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 3.7e-20 102.1 91 59.3
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 4.5e-18 95.1 76 64.5
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 8.6e-17 90.9 76 61.8
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 2.8e-15 85.9 78 57.7
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 6.1e-15 84.7 40 100.0
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 8.0e-15 84.3 75 53.3
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.8e-14 83.2 88 46.6
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 6.8e-14 81.3 76 52.6
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.4e-13 78.6 89 43.8
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 9.8e-13 77.4 89 41.6
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 1.1e-11 73.9 40 90.0
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 4.5e-10 68.6 39 84.6
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 5.9e-10 68.2 64 54.7


User provided reference genes

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