Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p66580 Brassica napus HOM05D000004 ORTHO05D000563 3.2e-68 261.5 125 100.0
BolC3t18929H Brassica oleracea HOM05D000004 ORTHO05D000563 3.2e-68 261.5 125 100.0
BolC1t03219H Brassica oleracea HOM05D000004 ORTHO05D000563 2.6e-09 65.9 109 37.6
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-09 65.9 65 46.2
Cpa.g.sc28.100 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 64.3 60 46.7
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 64.3 79 38.0
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 64.3 65 44.6
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 64.3 65 44.6
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 7.5e-09 64.3 65 44.6
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 9.9e-09 63.9 77 41.6
Cpa.g.sc203.12 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 63.5 65 47.7
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 63.5 65 43.1
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.3e-08 63.5 65 46.2
Cpa.g.sc303.9 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 63.2 65 46.2
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 62.8 65 44.6
SHI01378 Sapria himalayana HOM05D000004 ORTHO05D000563 2.9e-08 62.4 65 44.6
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-08 62.0 65 41.5
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 3.7e-08 62.0 77 42.9
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-08 62.0 65 43.1
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 4.9e-08 61.6 65 44.6
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 61.6 65 43.1
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 65 43.1
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 61.6 65 43.1
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 61.6 65 43.1
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 65 43.1
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 65 43.1
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 61.6 65 43.1
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 65 43.1
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 61.2 65 43.1
Cpa.g.sc1364.1 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 61.2 65 41.5
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 6.4e-08 61.2 65 46.2
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 60.8 65 43.1
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 60.8 65 41.5
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 8.3e-08 60.8 65 43.1
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 8.3e-08 60.8 65 43.1
Cpa.g.sc110.31 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 53 50.9
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 65 43.1
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 65 41.5
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-07 60.5 60 46.7
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-07 60.5 65 41.5
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 1.1e-07 60.5 77 42.9
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-07 60.5 65 43.1
BcaC02g10606 Brassica carinata HOM05D012556 ORTHO05D000563 1.4e-07 60.1 65 36.9
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 60.1 65 41.5
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-07 60.1 65 41.5
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.7 65 40.0
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.9e-07 59.7 64 43.8
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.9e-07 59.7 64 43.8
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.9e-07 59.7 64 43.8
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 59.3 65 46.2
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.9 65 41.5
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.9 65 40.0
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.2e-07 58.9 64 43.8
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 58.5 65 40.0
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.4e-07 58.2 64 39.1
TPR.G29503 Trifolium pratense HOM05D000004 ORTHO05D000002 5.4e-07 58.2 79 39.2
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 7.1e-07 57.8 65 40.0
Cpa.g.sc225.4 Carica papaya HOM05D000004 ORTHO05D000563 7.1e-07 57.8 65 40.0
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 7.1e-07 57.8 65 40.0
Thhalv10002848m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 7.1e-07 57.8 119 34.5
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 9.2e-07 57.4 65 41.5
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 57.4 63 41.3
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 65 41.5
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 65 41.5
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 57.0 65 40.0
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 57.0 65 40.0
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 65 41.5
Cpa.g.sc71.24 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.6 65 38.5
Cpa.g.sc778.1 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.6 65 40.0
SHI34774 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 56.6 65 38.5
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 2.1e-06 56.2 65 41.5
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 2.1e-06 56.2 65 41.5
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 65 46.2
Cpa.g.sc30.36 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 72 37.5
Cpa.g.sc56.54 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 65 38.5
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 65 44.6
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 2.7e-06 55.8 67 40.3
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-06 55.8 58 43.1
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.7e-06 55.8 76 36.8
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-06 55.5 58 43.1
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-06 55.5 58 43.1
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 55.1 58 41.4
Cpa.g.sc1201.1 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 55.1 72 38.9
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 55.1 65 38.5
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 55.1 65 40.0
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 4.6e-06 55.1 59 44.1
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-06 54.7 60 40.0
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-06 54.3 58 41.4
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 7.8e-06 54.3 65 40.0


User provided reference genes

Program Settings