Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p64670 Brassica napus HOM05D004416 ORTHO05D005439 4.1e-89 331.3 155 100.0
BolC3t18725H Brassica oleracea HOM05D004416 ORTHO05D005439 4.1e-89 331.3 155 100.0
BolC8t47841H Brassica oleracea HOM05D004416 ORTHO05D005439 2.9e-79 298.5 154 90.3
BcaC07g37518 Brassica carinata HOM05D004416 ORTHO05D005439 3.9e-79 298.1 154 90.3
BcaC06g36549 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-78 296.6 154 88.3
BolC7t40697H Brassica oleracea HOM05D004416 ORTHO05D005439 4.3e-78 294.7 154 88.3
C07p03030 Brassica napus HOM05D004416 ORTHO05D005439 7.3e-78 293.9 154 87.7
A09p34830 Brassica napus HOM05D004416 ORTHO05D005439 7.5e-75 283.9 154 85.7
BraA09t39013Z Brassica rapa HOM05D004416 ORTHO05D005439 1.7e-71 272.7 154 83.8
BcaC08g44284 Brassica carinata HOM05D004416 ORTHO05D005439 3.0e-71 271.9 154 85.1
C07p02610 Brassica napus HOM05D004416 ORTHO05D005439 3.0e-71 271.9 154 83.1
BolC7t40659H Brassica oleracea HOM05D004416 ORTHO05D005439 3.0e-71 271.9 154 83.1
BcaB02g07287 Brassica carinata HOM05D004416 ORTHO05D005439 5.2e-68 261.2 154 77.3
BcaB03g16343 Brassica carinata HOM05D004416 ORTHO05D005439 1.4e-65 253.1 154 74.0
BcaB07g33300 Brassica carinata HOM05D004416 ORTHO05D005439 1.9e-65 252.7 154 74.7
BcaB05g22410 Brassica carinata HOM05D004416 ORTHO05D005439 3.2e-65 251.9 154 74.7
BcaB04g18755 Brassica carinata HOM05D004416 ORTHO05D005439 9.2e-65 250.4 154 72.7
C07p16300 Brassica napus HOM05D004416 ORTHO05D005439 1.6e-64 249.6 154 74.0
BcaC06g35428 Brassica carinata HOM05D004416 ORTHO05D005439 3.9e-63 245.0 154 73.4
A05p24430 Brassica napus HOM05D004416 ORTHO05D005439 6.6e-63 244.2 154 77.9
BcaB05g23431 Brassica carinata HOM05D004416 ORTHO05D005439 3.3e-62 241.9 154 71.4
A06p26990 Brassica napus HOM05D004416 ORTHO05D005439 7.3e-62 240.7 150 71.3
C06p44170 Brassica napus HOM05D004416 ORTHO05D005439 9.5e-62 240.4 154 70.8
BcaB08g35239 Brassica carinata HOM05D004416 ORTHO05D005439 3.6e-61 238.4 154 68.8
A03p64740 Brassica napus HOM05D004416 ORTHO05D005439 6.2e-61 237.7 147 72.1
BraA03t15536Z Brassica rapa HOM05D004416 ORTHO05D005439 6.2e-61 237.7 147 72.1
BcaB07g32576 Brassica carinata HOM05D004416 ORTHO05D005439 8.1e-61 237.3 154 69.5
BcaC03g16239 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-60 236.9 154 76.6
BolC2t10047H Brassica oleracea HOM05D004416 ORTHO05D005439 1.1e-60 236.9 154 76.6
C02p40220 Brassica napus HOM05D004416 ORTHO05D005439 1.8e-60 236.1 154 76.6
A05p24910 Brassica napus HOM05D004416 ORTHO05D005439 5.2e-60 234.6 147 72.1
BraA01t02500Z Brassica rapa HOM05D004416 ORTHO05D005439 5.2e-60 234.6 147 71.4
BcaB08g35472 Brassica carinata HOM05D004416 ORTHO05D005439 6.8e-60 234.2 152 69.7
A02p33880 Brassica napus HOM05D004416 ORTHO05D005439 6.8e-60 234.2 147 71.4
A05p21040 Brassica napus HOM05D004416 ORTHO05D005439 6.8e-60 234.2 147 72.1
A06p23940 Brassica napus HOM05D004416 ORTHO05D005439 6.8e-60 234.2 153 68.0
BraA05t21008Z Brassica rapa HOM05D004416 ORTHO05D005439 6.8e-60 234.2 147 72.1
BcaB04g18146 Brassica carinata HOM05D004416 ORTHO05D005439 8.9e-60 233.8 149 70.5
BolC6t39489H Brassica oleracea HOM05D004416 ORTHO05D005439 8.9e-60 233.8 154 68.8
C04p26840 Brassica napus HOM05D004416 ORTHO05D005439 1.2e-59 233.4 154 67.5
BolC4t24120H Brassica oleracea HOM05D004416 ORTHO05D005439 1.2e-59 233.4 154 67.5
BcaB03g16134 Brassica carinata HOM05D004416 ORTHO05D005439 1.5e-59 233.0 153 69.3
BraA02t08406Z Brassica rapa HOM05D004416 ORTHO05D005439 2.0e-59 232.6 147 70.7
A02p29090 Brassica napus HOM05D004416 ORTHO05D005439 2.6e-59 232.3 153 69.3
BraA02t07941Z Brassica rapa HOM05D004416 ORTHO05D005439 3.4e-59 231.9 154 68.8
BraA06t25484Z Brassica rapa HOM05D004416 ORTHO05D005439 3.4e-59 231.9 147 69.4
A06p35830 Brassica napus HOM05D004416 ORTHO05D005439 4.4e-59 231.5 153 67.3
BraA04t16567Z Brassica rapa HOM05D004416 ORTHO05D005439 4.4e-59 231.5 147 71.4
A06p21490 Brassica napus HOM05D004416 ORTHO05D005439 2.2e-58 229.2 147 69.4
C07p05230 Brassica napus HOM05D004416 ORTHO05D005439 2.2e-58 229.2 154 73.4
BcaB01g01525 Brassica carinata HOM05D004416 ORTHO05D005439 3.7e-58 228.4 149 67.8
BcaB01g02103 Brassica carinata HOM05D004416 ORTHO05D005439 3.7e-58 228.4 149 70.5
BcaB08g35481 Brassica carinata HOM05D004416 ORTHO05D005439 3.7e-58 228.4 149 67.8
C08p05960 Brassica napus HOM05D004416 ORTHO05D005439 8.3e-58 227.3 154 67.5
BcaB06g27913 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-57 226.9 139 71.9
C06p17070 Brassica napus HOM05D004416 ORTHO05D005439 1.1e-57 226.9 154 73.4
BraA06t25908Z Brassica rapa HOM05D004416 ORTHO05D005439 1.4e-57 226.5 142 70.4
BolC7t40921H Brassica oleracea HOM05D004416 ORTHO05D005439 1.9e-57 226.1 154 72.7
BcaB01g01830 Brassica carinata HOM05D004416 ORTHO05D005439 2.4e-57 225.7 149 68.5
BolC6t36905H Brassica oleracea HOM05D004416 ORTHO05D005439 4.1e-57 224.9 154 72.7
BcaB06g27181 Brassica carinata HOM05D004416 ORTHO05D005439 1.7e-55 219.5 137 73.7
BcaC03g15854 Brassica carinata HOM05D004416 ORTHO05D005439 6.6e-55 217.6 134 76.1
BolC3t19272H Brassica oleracea HOM05D004416 ORTHO05D005439 6.6e-55 217.6 154 65.6
BcaB08g34713 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-54 216.9 150 64.7
A07p03080 Brassica napus HOM05D004416 ORTHO05D005439 1.2e-53 213.4 142 73.2
BcaB08g35284 Brassica carinata HOM05D004416 ORTHO05D005439 1.6e-53 213.0 149 65.8
BcaB01g01401 Brassica carinata HOM05D004416 ORTHO05D005439 6.2e-53 211.1 154 64.3
C05p42380 Brassica napus HOM05D004416 ORTHO05D005439 8.1e-53 210.7 116 85.3
BolC5t32967H Brassica oleracea HOM05D004416 ORTHO05D005439 8.1e-53 210.7 116 85.3
BcaB08g35336 Brassica carinata HOM05D004416 ORTHO05D005439 4.0e-52 208.4 154 63.6
BcaC03g16936 Brassica carinata HOM05D004416 ORTHO05D005439 6.8e-52 207.6 154 64.3
BraA07t27948Z Brassica rapa HOM05D004416 ORTHO05D005439 2.0e-51 206.1 110 88.2
BcaC06g36337 Brassica carinata HOM05D004416 ORTHO05D005439 5.8e-51 204.5 154 67.5
BcaB02g11426 Brassica carinata HOM05D004416 ORTHO05D005439 7.6e-51 204.1 154 64.3
BolC2t08689H Brassica oleracea HOM05D004416 ORTHO05D005439 9.9e-51 203.8 136 67.6
BcaC02g10699 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-50 203.4 154 62.3
C02p26230 Brassica napus HOM05D004416 ORTHO05D005439 1.3e-50 203.4 136 66.2
BcaC03g15907 Brassica carinata HOM05D004416 ORTHO05D005439 2.9e-50 202.2 154 63.6
A07p01480 Brassica napus HOM05D004416 ORTHO05D005439 4.9e-50 201.4 110 87.3
BcaC01g01957 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-49 200.3 154 62.3
BcaB08g35163 Brassica carinata HOM05D004416 ORTHO05D005439 1.4e-49 199.9 154 62.3
BcaB07g33926 Brassica carinata HOM05D004416 ORTHO05D005439 1.9e-49 199.5 154 61.7
BcaB06g26187 Brassica carinata HOM05D004416 ORTHO05D005439 9.2e-49 197.2 149 61.7
A06p23410 Brassica napus HOM05D004416 ORTHO05D005439 3.5e-48 195.3 120 70.0
BcaB04g17617 Brassica carinata HOM05D004416 ORTHO05D005439 7.8e-48 194.1 149 60.4
BolC8t47412H Brassica oleracea HOM05D004416 ORTHO05D005439 2.1e-45 186.0 122 67.2
BraA10t42853Z Brassica rapa HOM05D004416 ORTHO05D005439 3.6e-45 185.3 147 60.5
C02p39710 Brassica napus HOM05D004416 ORTHO05D005439 8.1e-45 184.1 142 60.6
BolC7t41909H Brassica oleracea HOM05D004416 ORTHO05D005439 8.1e-45 184.1 154 58.4
A10p05910 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-44 183.3 147 59.9
BcaB03g16728 Brassica carinata HOM05D004416 ORTHO05D005439 2.4e-44 182.6 154 59.1
BcaB02g11237 Brassica carinata HOM05D004416 ORTHO05D005439 3.1e-44 182.2 108 75.9
BcaB03g16764 Brassica carinata HOM05D004416 ORTHO05D005439 5.3e-44 181.4 152 57.9
C07p14120 Brassica napus HOM05D004416 ORTHO05D005439 6.9e-44 181.0 154 57.1
A01p27350 Brassica napus HOM05D004416 ORTHO05D005439 9.0e-44 180.6 99 82.8
BcaB01g01334 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-42 176.8 154 58.4
BolC5t32488H Brassica oleracea HOM05D004416 ORTHO05D005439 1.3e-42 176.8 154 55.8
C07p09190 Brassica napus HOM05D004416 ORTHO05D005439 2.2e-42 176.0 94 87.2
A05p23250 Brassica napus HOM05D004416 ORTHO05D005439 6.4e-42 174.5 104 76.0
C05p32850 Brassica napus HOM05D004416 ORTHO05D005439 8.4e-42 174.1 138 64.5
BolC5t32016H Brassica oleracea HOM05D004416 ORTHO05D005439 8.4e-42 174.1 138 64.5
BcaB02g10429 Brassica carinata HOM05D004416 ORTHO05D005439 1.4e-41 173.3 154 55.2
C04p30580 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-41 173.3 154 61.0
C05p37470 Brassica napus HOM05D004416 ORTHO05D005439 1.9e-41 172.9 154 55.8
A04p13940 Brassica napus HOM05D004416 ORTHO05D005439 4.2e-41 171.8 137 59.9
BcaB07g33958 Brassica carinata HOM05D004416 ORTHO05D005439 8.7e-39 164.1 98 73.5
C04p46680 Brassica napus HOM05D004416 ORTHO05D005439 4.3e-38 161.8 154 51.9
BcaB05g23588 Brassica carinata HOM05D004416 ORTHO05D005439 5.6e-38 161.4 142 54.9
BolC7t41331H Brassica oleracea HOM05D004416 ORTHO05D005439 2.8e-37 159.1 86 86.0
C04p45740 Brassica napus HOM05D004416 ORTHO05D005439 3.6e-37 158.7 154 53.2
C06p19740 Brassica napus HOM05D004416 ORTHO05D005439 3.6e-37 158.7 154 57.1
BraA05t21334Z Brassica rapa HOM05D004416 ORTHO05D005439 4.8e-37 158.3 83 86.7
BolC9t58507H Brassica oleracea HOM05D004416 ORTHO05D005439 8.1e-37 157.5 154 52.6
A07p06300 Brassica napus HOM05D004416 ORTHO05D005439 9.0e-36 154.1 147 52.4
A01p28270 Brassica napus HOM05D004416 ORTHO05D005439 1.2e-35 153.7 83 85.5
BcaB08g34992 Brassica carinata HOM05D004416 ORTHO05D005439 3.4e-35 152.1 98 69.4
BcaB06g27354 Brassica carinata HOM05D004416 ORTHO05D005439 4.5e-35 151.8 121 56.2
A06p14140 Brassica napus HOM05D004416 ORTHO05D005439 6.4e-34 147.9 147 51.7
C02p36020 Brassica napus HOM05D004416 ORTHO05D005439 7.9e-32 141.0 85 76.5
A04p03910 Brassica napus HOM05D004416 ORTHO05D005439 2.3e-31 139.4 91 68.1
C02p36050 Brassica napus HOM05D004416 ORTHO05D005439 2.3e-31 139.4 85 74.1
BraA04t16112Z Brassica rapa HOM05D004416 ORTHO05D005439 2.3e-31 139.4 91 68.1
BcaB07g32851 Brassica carinata HOM05D004416 ORTHO05D005439 1.9e-30 136.3 86 72.1
A06p24200 Brassica napus HOM05D004416 ORTHO05D005439 3.3e-30 135.6 84 70.2
BolC2t09620H Brassica oleracea HOM05D004416 ORTHO05D005439 7.4e-30 134.4 85 72.9
BcaB07g33907 Brassica carinata HOM05D004416 ORTHO05D005439 9.6e-30 134.0 89 67.4
A10p08170 Brassica napus HOM05D004416 ORTHO05D005439 2.1e-29 132.9 86 68.6
BolC4t26256H Brassica oleracea HOM05D004416 ORTHO05D005439 2.1e-29 132.9 132 50.8
BcaB04g18307 Brassica carinata HOM05D004416 ORTHO05D005439 2.8e-29 132.5 87 67.8
C05p42270 Brassica napus HOM05D004416 ORTHO05D005439 3.7e-29 132.1 83 71.1
BraSC35t45982Z Brassica rapa HOM05D004416 ORTHO05D005439 1.8e-28 129.8 86 67.4
C03p70170 Brassica napus HOM05D004416 ORTHO05D005439 2.4e-28 129.4 103 60.2
BcaB02g06414 Brassica carinata HOM05D004416 ORTHO05D005439 3.1e-28 129.0 86 67.4
A06p19220 Brassica napus HOM05D004416 ORTHO05D005439 2.0e-27 126.3 103 65.0
C06p12610 Brassica napus HOM05D004416 ORTHO05D005439 9.3e-25 117.5 90 65.6
C02p48380 Brassica napus HOM05D004416 ORTHO05D005439 1.6e-24 116.7 308 28.2
BolC2t10869H Brassica oleracea HOM05D004416 ORTHO05D005439 1.6e-24 116.7 308 28.2
BraA07t28105Z Brassica rapa HOM05D004416 ORTHO05D005439 5.7e-22 108.2 114 55.3
C03p88240 Brassica napus HOM05D004416 ORTHO05D005439 1.1e-17 94.0 154 39.6
BraA04t16462Z Brassica rapa HOM05D004416 ORTHO05D005439 3.5e-16 89.0 75 57.3
A03p65040 Brassica napus HOM05D004416 ORTHO05D005439 4.6e-16 88.6 57 68.4
BolC5t32955H Brassica oleracea HOM05D004416 ORTHO05D005439 5.7e-14 81.6 53 69.8
BolC4t26159H Brassica oleracea HOM05D004416 ORTHO05D005439 1.6e-13 80.1 54 68.5
BolC2t09672H Brassica oleracea HOM05D004416 ORTHO05D005439 3.7e-13 79.0 83 47.0
BraA01t02875Z Brassica rapa HOM05D004416 ORTHO05D005439 6.3e-13 78.2 40 85.0
BcaB07g32527 Brassica carinata HOM05D004416 ORTHO05D005439 1.8e-12 76.6 49 63.3
C09p56380 Brassica napus HOM05D004416 ORTHO05D005439 5.3e-12 75.1 67 56.7
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 6.5e-10 68.2 122 32.0
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 8.5e-10 67.8 118 30.5
Thhalv10023136m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.5e-09 66.2 130 33.8
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.5e-09 66.2 118 30.5
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 2.5e-09 66.2 118 29.7
C01p33390 Brassica napus HOM05D004416 ORTHO05D005439 3.2e-09 65.9 34 88.2
A01p25060 Brassica napus HOM05D004416 ORTHO05D005439 4.2e-09 65.5 46 60.9
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 4.2e-09 65.5 123 31.7
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.2e-09 65.5 117 31.6
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 5.5e-09 65.1 118 29.7
C02p36030 Brassica napus HOM05D004416 ORTHO05D033189 2.7e-08 62.8 34 85.3
C02p36060 Brassica napus HOM05D004416 ORTHO05D033189 2.7e-08 62.8 34 85.3
BolC2t09621H Brassica oleracea HOM05D004416 ORTHO05D033189 2.7e-08 62.8 34 85.3
Thhalv10015414m.g Eutrema salsugineum HOM05D028662 ORTHO05D029345 2.7e-08 62.8 141 28.4
A09p32950 Brassica napus HOM05D004416 ORTHO05D005439 3.6e-08 62.4 34 82.4
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 3.6e-08 62.4 120 30.8
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 3.6e-08 62.4 117 30.8
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 7.9e-08 61.2 121 31.4
C07p06580 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-07 60.8 36 77.8
BolC7t41080H Brassica oleracea HOM05D004416 ORTHO05D005439 1.0e-07 60.8 36 77.8
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.4e-07 60.5 97 33.0
Thhalv10015897m.g Eutrema salsugineum HOM05D028662 ORTHO05D029345 1.4e-07 60.5 123 31.7
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 1.4e-07 60.5 119 28.6
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.8e-07 60.1 116 31.0
Thhalv10002926m.g Eutrema salsugineum HOM05D028662 ORTHO05D029345 3.0e-07 59.3 129 28.7
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 3.0e-07 59.3 99 36.4
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 3.9e-07 58.9 122 32.0
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 3.9e-07 58.9 122 31.1
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 5.1e-07 58.5 129 26.4
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 6.7e-07 58.2 122 31.1
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 8.8e-07 57.8 125 29.6
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 1.1e-06 57.4 120 30.8
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 1.5e-06 57.0 116 29.3
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 2.0e-06 56.6 114 31.6
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 2.0e-06 56.6 122 28.7
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 2.0e-06 56.6 121 29.8
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.0e-06 56.6 138 28.3
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.5e-06 56.2 115 27.8
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.5e-06 56.2 115 27.8
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 2.5e-06 56.2 115 25.2
Thhalv10002858m.g Eutrema salsugineum HOM05D028662 ORTHO05D029345 3.3e-06 55.8 142 27.5
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.3e-06 55.8 120 30.8
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 4.3e-06 55.5 126 26.2
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.3e-06 55.5 130 28.5
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 5.7e-06 55.1 126 28.6
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 5.7e-06 55.1 126 28.6
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 5.7e-06 55.1 99 30.3


User provided reference genes

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