Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p64460 Brassica napus HOM05D005623 ORTHO05D007130 5.1e-44 180.6 88 100.0
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 6.2e-26 120.6 63 92.1
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 6.2e-26 120.6 63 92.1
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 6.2e-26 120.6 63 92.1
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 1.2e-24 116.3 63 87.3
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 1.2e-24 116.3 63 87.3
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 1.5e-24 115.9 63 87.3
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 1.5e-24 115.9 63 87.3
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 4.5e-24 114.4 63 84.1
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 4.5e-24 114.4 63 85.7
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 5.8e-24 114.0 63 85.7
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 5.8e-24 114.0 63 85.7
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 5.1e-20 100.9 63 73.0
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 4.3e-19 97.8 63 76.2
Lj4A313G21 Lonicera japonica HOM05D005623 ORTHO05D007130 9.7e-19 96.7 63 69.8
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 2.2e-18 95.5 63 69.8
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 2.8e-18 95.1 63 68.3
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 3.7e-18 94.7 63 69.8
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 8.2e-18 93.6 63 69.8
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 1.1e-17 93.2 63 66.7
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 1.1e-17 93.2 63 66.7
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.8e-17 92.4 63 68.3
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 1.8e-17 92.4 63 66.7
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 1.8e-17 92.4 63 66.7
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 3.1e-17 91.7 64 68.8
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 4.1e-17 91.3 63 66.7
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 4.1e-17 91.3 63 65.1
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 9.0e-17 90.1 63 68.3
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 9.0e-17 90.1 63 65.1
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 9.0e-17 90.1 63 65.1
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 1.5e-16 89.4 63 66.7
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 2.0e-16 89.0 63 65.1
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 2.0e-16 89.0 63 66.7
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 2.0e-16 89.0 63 63.5
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 2.6e-16 88.6 63 61.9
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 5.9e-16 87.4 63 61.9
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 5.9e-16 87.4 63 65.1
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 7.7e-16 87.0 63 61.9
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 7.7e-16 87.0 63 61.9
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 1.0e-15 86.7 63 60.3
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 1.0e-15 86.7 63 61.9
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 1.3e-15 86.3 61 67.2
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 1.3e-15 86.3 63 61.9
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 1.7e-15 85.9 63 63.5
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 1.7e-15 85.9 63 61.9
Lj4A556G6 Lonicera japonica HOM05D005623 ORTHO05D007130 2.2e-15 85.5 58 67.2
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 2.9e-15 85.1 63 57.1
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 2.9e-15 85.1 63 58.7
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 3.8e-15 84.7 63 63.5
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 6.5e-15 84.0 63 61.9
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 1.1e-14 83.2 61 63.9
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.4e-14 82.8 63 61.9
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 1.9e-14 82.4 63 60.3
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 2.5e-14 82.0 63 61.9
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 3.2e-14 81.6 61 62.3
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 3.2e-14 81.6 63 60.3
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.2e-14 81.3 63 60.3
Psat7g019600 Pisum sativum HOM05D005623 ORTHO05D007130 4.2e-14 81.3 63 54.0
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 7.2e-14 80.5 63 60.3
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 7.2e-14 80.5 63 60.3
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 9.4e-14 80.1 63 57.1
ClCG03G015820 Citrullus lanatus HOM05D005623 ORTHO05D007130 1.2e-13 79.7 63 60.3
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 1.2e-13 79.7 63 58.7
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 1.2e-13 79.7 63 61.9
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 1.6e-13 79.3 63 60.3
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.6e-13 79.3 63 57.1
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 1.6e-13 79.3 63 60.3
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 2.1e-13 79.0 63 60.3
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 2.1e-13 79.0 63 55.6
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.7e-13 78.6 63 58.7
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 2.7e-13 78.6 61 57.4
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 3.6e-13 78.2 63 57.1
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 4.6e-13 77.8 63 55.6
Nn1g05571 Nelumbo nucifera HOM05D005623 ORTHO05D007130 4.6e-13 77.8 63 58.7
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 4.6e-13 77.8 63 57.1
Nitab4.5_0000713g0170 Nicotiana tabacum HOM05D005623 ORTHO05D007130 6.1e-13 77.4 63 55.6
Sabra06G0118200 Salix brachista HOM05D005623 ORTHO05D007130 6.1e-13 77.4 63 60.3
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 1.0e-12 76.6 63 55.6
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 1.0e-12 76.6 63 55.6
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 1.0e-12 76.6 63 55.6
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 1.0e-12 76.6 63 55.6
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 1.4e-12 76.3 63 58.7
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 1.4e-12 76.3 63 57.1
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 1.8e-12 75.9 63 52.4
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 2.3e-12 75.5 63 60.3
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 3.9e-12 74.7 63 58.7
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 5.1e-12 74.3 63 55.6
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 5.1e-12 74.3 63 55.6
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 1.5e-11 72.8 63 57.1
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 1.5e-11 72.8 63 54.0
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 1.5e-11 72.8 63 52.4
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 2.5e-11 72.0 63 52.4
vmacro00758 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 2.5e-11 72.0 54 63.0
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 9.7e-11 70.1 63 49.2
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 6.3e-10 67.4 57 57.9
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 1.1e-09 66.6 63 50.8
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 4.1e-09 64.7 46 67.4
CBR_g19773 Chara braunii HOM05D005623 ORTHO05D007130 9.1e-09 63.5 63 47.6
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 1.5e-08 62.8 52 53.8
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 2.0e-08 62.4 63 44.4
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 3.8e-07 58.2 63 47.6
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 3.8e-07 58.2 64 40.6
Glyma.08G030000 Glycine max HOM05D005623 ORTHO05D007130 5.0e-07 57.8 43 60.5
SEGI_25582 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 1.4e-06 56.2 63 44.4
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 5.5e-06 54.3 44 63.6


User provided reference genes

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