Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02569 Brassica carinata HOM05D000416 ORTHO05D027099 1.4e-60 236.1 118 100.0
C03p63370 Brassica napus HOM05D000416 ORTHO05D027099 1.4e-60 236.1 118 100.0
BolC3t18590H Brassica oleracea HOM05D000416 ORTHO05D027099 1.4e-60 236.1 118 100.0
C05p18850 Brassica napus HOM05D000416 ORTHO05D027099 5.7e-59 230.7 118 97.5
BcaC05g25933 Brassica carinata HOM05D000416 ORTHO05D000322 2.7e-56 221.9 117 93.2
BcaB07g32476 Brassica carinata HOM05D000416 ORTHO05D000322 7.3e-46 187.2 126 79.4
BcaB06g27399 Brassica carinata HOM05D000416 ORTHO05D000322 3.1e-44 181.8 126 77.0
Sp6g25270 Schrenkiella parvula HOM05D000416 ORTHO05D000322 1.0e-39 166.8 125 72.8
BcaB05g23364 Brassica carinata HOM05D000416 ORTHO05D000322 1.1e-36 156.8 125 69.6
BraA02t05480Z Brassica rapa HOM05D000416 ORTHO05D000322 1.1e-36 156.8 125 69.6
BcaC05g26905 Brassica carinata HOM05D000416 ORTHO05D000322 3.1e-36 155.2 125 68.8
C05p27610 Brassica napus HOM05D000416 ORTHO05D000322 3.1e-36 155.2 125 68.8
BolC5t31482H Brassica oleracea HOM05D000416 ORTHO05D000322 3.1e-36 155.2 125 68.8
A02p05210 Brassica napus HOM05D000416 ORTHO05D000322 1.2e-35 153.3 125 68.0
CARHR193880 Cardamine hirsuta HOM05D000416 ORTHO05D000322 1.5e-27 126.3 128 60.2
Thhalv10013672m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 4.9e-26 121.3 133 55.6
AL6G30520 Arabidopsis lyrata HOM05D000416 ORTHO05D000322 1.8e-20 102.8 111 53.2
Aa31LG11G10540 Aethionema arabicum HOM05D000416 ORTHO05D000322 5.3e-20 101.3 135 46.7
BolC3t15591H Brassica oleracea HOM05D000416 ORTHO05D000322 5.3e-20 101.3 120 51.7
BcaB01g02943 Brassica carinata HOM05D000416 ORTHO05D000322 6.9e-20 100.9 120 51.7
BraA03t11921Z Brassica rapa HOM05D000416 ORTHO05D000322 9.0e-20 100.5 120 50.8
BcaC01g04900 Brassica carinata HOM05D000416 ORTHO05D000322 1.2e-19 100.1 120 51.7
C03p32520 Brassica napus HOM05D000416 ORTHO05D000322 1.2e-19 100.1 120 51.7
A03p27080 Brassica napus HOM05D000416 ORTHO05D000322 4.5e-19 98.2 120 50.0
Carub.0006s1743 Capsella rubella HOM05D000416 ORTHO05D000322 3.8e-18 95.1 105 52.4
AT5G19100 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 4.2e-17 91.7 105 52.4
Aa31LG11G10580 Aethionema arabicum HOM05D000416 ORTHO05D000322 2.7e-16 89.0 131 43.5
Aa31LG11G10600 Aethionema arabicum HOM05D000416 ORTHO05D000322 3.0e-15 85.5 128 45.3
BcaB05g23365 Brassica carinata HOM05D000416 ORTHO05D000322 3.0e-15 85.5 117 47.9
CARHR193870 Cardamine hirsuta HOM05D000416 ORTHO05D000322 4.3e-14 81.6 136 44.9
CARHR193850 Cardamine hirsuta HOM05D000416 ORTHO05D000322 2.2e-10 69.3 102 44.1
BcaC01g04901 Brassica carinata HOM05D000416 ORTHO05D008509 7.1e-09 64.3 80 51.2
Sp6g25260 Schrenkiella parvula HOM05D000416 ORTHO05D000322 1.2e-08 63.5 121 39.7
Thhalv10015503m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 2.1e-08 62.8 121 38.0
BcaC03g13640 Brassica carinata HOM05D000416 ORTHO05D000322 3.5e-08 62.0 121 38.8
C02p10300 Brassica napus HOM05D000416 ORTHO05D000322 3.5e-08 62.0 121 38.8
A02p05220 Brassica napus HOM05D000416 ORTHO05D000322 1.0e-07 60.5 110 40.9
BcaB05g23367 Brassica carinata HOM05D000305 ORTHO05D000065 1.5e-06 56.6 121 36.4


User provided reference genes

Program Settings