Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p63280 Brassica napus HOM05D004827 ORTHO05D005395 3.0e-84 315.1 151 100.0
BolC3t18580H Brassica oleracea HOM05D004827 ORTHO05D005395 1.5e-83 312.8 151 99.3
C07p01580 Brassica napus HOM05D004827 ORTHO05D005395 4.2e-70 268.1 153 88.9
BcaC01g02577 Brassica carinata HOM05D004827 ORTHO05D005395 1.6e-69 266.2 128 98.4
BcaB07g34053 Brassica carinata HOM05D004827 ORTHO05D005395 2.2e-63 245.7 134 90.3
C05p06230 Brassica napus HOM05D004827 ORTHO05D005395 2.9e-63 245.4 134 90.3
BolC5t29377H Brassica oleracea HOM05D004827 ORTHO05D005395 2.9e-63 245.4 134 90.3
CARHR007920 Cardamine hirsuta HOM05D004827 ORTHO05D005395 8.4e-63 243.8 134 89.6
Sp1g06750 Schrenkiella parvula HOM05D004827 ORTHO05D005395 8.4e-63 243.8 134 90.3
AL1G18470 Arabidopsis lyrata HOM05D004827 ORTHO05D005395 4.2e-62 241.5 134 88.8
BraA06t23724Z Brassica rapa HOM05D004827 ORTHO05D005395 2.1e-61 239.2 139 87.1
Carub.0001s0746 Capsella rubella HOM05D004827 ORTHO05D005395 2.1e-61 239.2 134 88.1
AT1G08110 Arabidopsis thaliana HOM05D004827 ORTHO05D005395 3.5e-61 238.4 134 87.3
Thhalv10008645m.g Eutrema salsugineum HOM05D004827 ORTHO05D005395 3.5e-61 238.4 134 88.1
Aa31sc241G20 Aethionema arabicum HOM05D004827 ORTHO05D005395 3.0e-60 235.3 134 85.8
A06p05180 Brassica napus HOM05D004827 ORTHO05D005395 9.6e-59 230.3 162 74.7
THA.LOC104800584 Tarenaya hassleriana HOM05D004827 ORTHO05D005395 2.8e-58 228.8 150 75.3
THA.LOC104808316 Tarenaya hassleriana HOM05D004827 ORTHO05D005395 4.5e-56 221.5 128 83.6
Ah.01g003210 Amaranthus hybridus HOM05D004827 ORTHO05D005395 1.3e-55 219.9 134 79.9
Atru.chr3.3541 Acer truncatum HOM05D004827 ORTHO05D005395 2.2e-55 219.2 134 78.4
BcaB07g34056 Brassica carinata HOM05D004827 ORTHO05D005395 3.8e-55 218.4 141 78.7
Prupe.6G109100 Prunus persica HOM05D004827 ORTHO05D005395 1.1e-54 216.9 134 78.4
CANSAT78G0379 Cannabis sativa HOM05D004827 ORTHO05D005395 1.4e-54 216.5 133 78.2
MD11G1146100 Malus domestica HOM05D004827 ORTHO05D005395 2.4e-54 215.7 134 77.6
Haze_23732 Corylus avellana HOM05D004827 ORTHO05D005395 3.2e-54 215.3 134 77.6
MD00G1032700 Malus domestica HOM05D004827 ORTHO05D005395 3.2e-54 215.3 134 78.4
PGR102G0165 Punica granatum HOM05D004827 ORTHO05D005395 4.2e-54 214.9 134 78.4
CsaV3_1G013530 Cucumis sativus L. HOM05D004827 ORTHO05D005395 1.2e-53 213.4 134 76.9
Manes.04G014900 Manihot esculenta HOM05D004827 ORTHO05D005395 1.2e-53 213.4 134 76.1
Nn6g35282 Nelumbo nucifera HOM05D004827 ORTHO05D005395 1.2e-53 213.4 134 76.9
Potri.009G007200 Populus trichocarpa HOM05D004827 ORTHO05D005395 1.2e-53 213.4 133 79.7
Actinidia24133 Actinidia chinensis HOM05D004827 ORTHO05D005395 2.1e-53 212.6 134 76.9
MELO3C004950.2 Cucumis melo HOM05D004827 ORTHO05D005395 2.1e-53 212.6 134 77.6
Sed0007609 Sechium edule HOM05D004827 ORTHO05D005395 2.1e-53 212.6 134 77.6
Sabra09G0004200 Salix brachista HOM05D004827 ORTHO05D005395 2.7e-53 212.2 133 78.9
PSO339G5318 Papaver somniferum HOM05D004827 ORTHO05D005395 3.5e-53 211.8 134 76.9
Rhsim13G0099200 Rhododendron simsii HOM05D004827 ORTHO05D005395 3.5e-53 211.8 134 76.1
AUR62029203 Chenopodium quinoa HOM05D004827 ORTHO05D005395 4.6e-53 211.5 134 75.4
Medtr4g057685 Medicago truncatula HOM05D004827 ORTHO05D005395 4.6e-53 211.5 134 76.1
TAR633G0460 Trochodendron aralioides HOM05D004827 ORTHO05D005395 4.6e-53 211.5 134 76.1
TWI38G0398 Tripterygium wilfordii HOM05D004827 ORTHO05D005395 6.0e-53 211.1 134 76.9
COL.COLO4_11061 Corchorus olitorius HOM05D004827 ORTHO05D005395 7.9e-53 210.7 126 80.2
HPP92_002620 Vanilla planifolia HOM05D004827 ORTHO05D005395 7.9e-53 210.7 134 76.1
Sc15g0001580 Simmondsia chinensis HOM05D004827 ORTHO05D005395 1.3e-52 209.9 134 75.4
GSVIVG01031499001 Vitis vinifera HOM05D004827 ORTHO05D005395 1.3e-52 209.9 134 75.4
FAN21G3549 Fragaria x ananassa HOM05D004827 ORTHO05D005395 1.8e-52 209.5 129 78.3
Hund01469 Selenicereus undatus HOM05D004827 ORTHO05D005395 2.3e-52 209.1 134 75.4
CSS0005897 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 3.0e-52 208.8 134 75.4
PSO063G0803 Papaver somniferum HOM05D004827 ORTHO05D005395 3.0e-52 208.8 134 76.1
vmacro03268 Vaccinium macrocarpon HOM05D004827 ORTHO05D005395 3.0e-52 208.8 134 75.4
HPP92_002675 Vanilla planifolia HOM05D004827 ORTHO05D005395 3.0e-52 208.8 134 75.4
Nitab4.5_0004993g0010 Nicotiana tabacum HOM05D004827 ORTHO05D005395 3.9e-52 208.4 134 76.9
Os05g0295800 Oryza sativa ssp. japonica HOM05D004827 ORTHO05D005395 5.1e-52 208.0 134 75.4
SalBow3G2012 Salvia bowleyana HOM05D004827 ORTHO05D005395 5.1e-52 208.0 133 74.4
MSTRG.17890 Avicennia marina HOM05D004827 ORTHO05D005395 6.7e-52 207.6 133 75.2
BcaC05g24729 Brassica carinata HOM05D004827 ORTHO05D005395 6.7e-52 207.6 131 80.9
FvH4_3g30960 Fragaria vesca HOM05D004827 ORTHO05D005395 6.7e-52 207.6 129 77.5
Psat0s3927g0040 Pisum sativum HOM05D004827 ORTHO05D005395 6.7e-52 207.6 133 75.2
Ciclev10029169m.g Citrus clementina HOM05D004827 ORTHO05D005395 8.7e-52 207.2 131 74.8
FAN25G1724 Fragaria x ananassa HOM05D004827 ORTHO05D005395 8.7e-52 207.2 133 75.9
QL01p015669 Quercus lobata HOM05D004827 ORTHO05D005395 8.7e-52 207.2 128 78.1
AUR62014938 Chenopodium quinoa HOM05D004827 ORTHO05D005395 1.1e-51 206.8 130 75.4
CiPaw.13G119600 Carya illinoinensis HOM05D004827 ORTHO05D005395 1.5e-51 206.5 134 74.6
Cc01_g10500 Coffea canephora HOM05D004827 ORTHO05D005395 1.5e-51 206.5 134 74.6
Phvul.011G084400 Phaseolus vulgaris HOM05D004827 ORTHO05D005395 1.5e-51 206.5 134 75.4
MSTRG.21095 Avicennia marina HOM05D004827 ORTHO05D005395 1.9e-51 206.1 133 73.7
Migut.D02265 Erythranthe guttata HOM05D004827 ORTHO05D005395 1.9e-51 206.1 133 73.7
Dinv34726 Davidia involucrata HOM05D004827 ORTHO05D005395 2.5e-51 205.7 134 73.9
Cpa.g.sc65.38 Carica papaya HOM05D004827 ORTHO05D005395 3.3e-51 205.3 134 73.9
Lj3g0013572 Lotus japonicus HOM05D004827 ORTHO05D005395 3.3e-51 205.3 132 74.2
CAN.G546.14 Capsicum annuum HOM05D004827 ORTHO05D005395 4.3e-51 204.9 134 75.4
SEGI_26473 Sequoiadendron giganteum HOM05D004827 ORTHO05D005395 4.3e-51 204.9 135 72.6
TPR.G6148 Trifolium pratense HOM05D004827 ORTHO05D005395 4.3e-51 204.9 134 74.6
FAN16G1413 Fragaria x ananassa HOM05D004827 ORTHO05D005395 7.4e-51 204.1 129 76.0
EL10Ac9g22587 Beta vulgaris HOM05D004827 ORTHO05D005395 1.3e-50 203.4 134 72.4
Glyma.11G194300 Glycine max HOM05D004827 ORTHO05D005395 1.3e-50 203.4 134 73.9
SGA_v2.0_scaffold263G45967 Striga asiatica HOM05D004827 ORTHO05D005395 1.3e-50 203.4 133 72.9
Nitab4.5_0001442g0020 Nicotiana tabacum HOM05D004827 ORTHO05D005395 1.6e-50 203.0 125 78.4
RcHm_v2.0_Chr5g0057511 Rosa chinensis HOM05D004827 ORTHO05D005395 1.6e-50 203.0 134 74.6
Thecc.09G349000 Theobroma cacao HOM05D004827 ORTHO05D005395 2.1e-50 202.6 126 74.6
Glyma.12G079700 Glycine max HOM05D004827 ORTHO05D005395 2.8e-50 202.2 129 74.4
Duzib150G1276 Durio zibethinus HOM05D004827 ORTHO05D005395 3.7e-50 201.8 126 74.6
PGSC0003DMG400008074 Solanum tuberosum HOM05D004827 ORTHO05D005395 3.7e-50 201.8 134 73.9
CDE06G2782 Ceratophyllum demersum HOM05D004827 ORTHO05D005395 4.8e-50 201.4 125 76.8
Sopen11g027750 Solanum pennellii HOM05D004827 ORTHO05D005395 4.8e-50 201.4 134 73.9
Peaxi162Scf00682g00012 Petunia axillaris HOM05D004827 ORTHO05D005395 8.1e-50 200.7 145 69.0
Solyc11g069040.3 Solanum lycopersicum HOM05D004827 ORTHO05D005395 1.1e-49 200.3 134 73.1
arahy.Tifrunner.gnm1.ann1.PTJZ35 Arachis hypogaea HOM05D004827 ORTHO05D005395 1.4e-49 199.9 139 71.9
RcHm_v2.0_Chr5g0057571 Rosa chinensis HOM05D004827 ORTHO05D005395 1.8e-49 199.5 140 70.7
SGA_v2.0_scaffold116G32194 Striga asiatica HOM05D004827 ORTHO05D005395 2.4e-49 199.1 133 70.7
CSS0024800 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 4.0e-49 198.4 134 72.4
Ca_19305_v3 Cicer arietinum L. HOM05D004827 ORTHO05D005395 4.0e-49 198.4 129 73.6
Gohir.A13G232600 Gossypium hirsutum HOM05D004827 ORTHO05D005395 4.0e-49 198.4 126 76.2
Gohir.D13G238300 Gossypium hirsutum HOM05D004827 ORTHO05D005395 4.0e-49 198.4 126 76.2
Gorai.013G269200 Gossypium raimondii HOM05D004827 ORTHO05D005395 4.0e-49 198.4 126 76.2
ClCG03G002770 Citrullus lanatus HOM05D004827 ORTHO05D005395 6.9e-49 197.6 165 63.0
Lsat_1_v5_gn_1_62721 Lactuca sativa HOM05D004827 ORTHO05D005395 9.0e-49 197.2 126 74.6
Lalb_Chr03g0027631 Lupinus albus HOM05D004827 ORTHO05D005395 9.0e-49 197.2 134 70.9
VMungo1127G2270 Vigna mungo HOM05D004827 ORTHO05D005395 9.0e-49 197.2 129 74.4
Aqoxy1G01146 Aquilegia oxysepala HOM05D004827 ORTHO05D005395 1.2e-48 196.8 134 72.4
Zm00001eb086540 Zea mays HOM05D004827 ORTHO05D005395 1.2e-48 196.8 129 74.4
HanXRQChr11g0346211 Helianthus annuus HOM05D004827 ORTHO05D005395 1.9e-46 189.5 125 71.2
HanXRQChr01g0019511 Helianthus annuus HOM05D004827 ORTHO05D005395 1.6e-45 186.4 132 66.7
Glyma.11G194200 Glycine max HOM05D004827 ORTHO05D005395 2.1e-45 186.0 126 69.0
Ah.01g003220 Amaranthus hybridus HOM05D004827 ORTHO05D005395 2.7e-45 185.7 134 67.2
Oeu018368.2 Olea europaea HOM05D004827 ORTHO05D005395 2.3e-44 182.6 134 66.4
SMO353G0047 Selaginella moellendorffii HOM05D004827 ORTHO05D005395 3.0e-44 182.2 134 64.2
Mapoly0033s0083 Marchantia polymorpha HOM05D004827 ORTHO05D005395 1.1e-43 180.3 125 67.2
ECA248G1504 Erigeron canadensis HOM05D004827 ORTHO05D005395 4.3e-43 178.3 125 69.6
Pp3c10_11200 Physcomitrium patens HOM05D004827 ORTHO05D005395 1.3e-42 176.8 122 68.0
Gohir.D03G138400 Gossypium hirsutum HOM05D004827 ORTHO05D005395 3.7e-42 175.3 135 63.7
Gohir.D03G138500 Gossypium hirsutum HOM05D004827 ORTHO05D005395 3.7e-42 175.3 134 64.9
Gorai.003G145100 Gossypium raimondii HOM05D004827 ORTHO05D005395 3.7e-42 175.3 135 63.7
Gorai.003G145200 Gossypium raimondii HOM05D004827 ORTHO05D005395 3.7e-42 175.3 134 64.9
Duzib170G0342 Durio zibethinus HOM05D004827 ORTHO05D005395 4.8e-42 174.9 126 66.7
Gohir.D03G138300 Gossypium hirsutum HOM05D004827 ORTHO05D005395 4.8e-42 174.9 134 64.2
Gorai.003G145000 Gossypium raimondii HOM05D004827 ORTHO05D005395 4.8e-42 174.9 134 64.2
Gohir.A03G030100 Gossypium hirsutum HOM05D004827 ORTHO05D005395 8.2e-42 174.1 134 64.2
Lj2A1013G28 Lonicera japonica HOM05D004827 ORTHO05D005395 8.2e-42 174.1 178 53.4
Mapoly0033s0085 Marchantia polymorpha HOM05D004827 ORTHO05D005395 1.4e-41 173.3 123 68.3
CSS0040325 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 4.1e-41 171.8 134 65.7
Cre04.g216100 Chlamydomonas reinhardtii HOM05D004827 ORTHO05D005395 4.1e-41 171.8 122 68.0
Gohir.A03G030000 Gossypium hirsutum HOM05D004827 ORTHO05D005395 5.3e-41 171.4 125 66.4
Pp3c14_6610 Physcomitrium patens HOM05D004827 ORTHO05D005395 9.0e-41 170.6 121 65.3
ECA248G0211 Erigeron canadensis HOM05D004827 ORTHO05D005395 1.2e-40 170.2 125 63.2
Gohir.A03G030200 Gossypium hirsutum HOM05D004827 ORTHO05D005395 2.0e-40 169.5 125 65.6
AUR62029205 Chenopodium quinoa HOM05D004827 ORTHO05D005395 2.9e-39 165.6 141 61.7
ATR0219G018 Amborella trichopoda HOM05D004827 ORTHO05D005395 6.5e-39 164.5 132 63.6
FAN11G0101 Fragaria x ananassa HOM05D004827 ORTHO05D005395 1.4e-38 163.3 108 73.1
arahy.Tifrunner.gnm1.ann1.4ZYX81 Arachis hypogaea HOM05D004827 ORTHO05D005395 1.9e-35 152.9 135 61.5
SEGI_34492 Sequoiadendron giganteum HOM05D004827 ORTHO05D005395 9.7e-35 150.6 101 71.3
Oeu018480.1 Olea europaea HOM05D004827 ORTHO05D005395 4.1e-33 145.2 93 73.1
SGA_v2.0_scaffold180G39601 Striga asiatica HOM05D004827 ORTHO05D005395 2.5e-30 136.0 132 50.0
THA.LOC104817647 Tarenaya hassleriana HOM05D004827 ORTHO05D005395 3.1e-25 119.0 72 83.3
Potri.004G214966 Populus trichocarpa HOM05D004827 ORTHO05D005395 2.9e-23 112.5 64 79.7
Gohir.D03G138550 Gossypium hirsutum HOM05D004827 ORTHO05D005395 4.2e-22 108.6 137 47.4
Cfa025448 Carpinus fangiana HOM05D004827 ORTHO05D005395 5.5e-22 108.2 123 43.9
Hma1.2p1_1647F.1_g295520 Hydrangea macrophylla HOM05D004827 ORTHO05D005395 7.2e-22 107.8 72 75.0
Cfa010307 Carpinus fangiana HOM05D004827 ORTHO05D005395 1.2e-21 107.1 72 75.0
MBI12_g32344_MAGBIO Magnolia biondii HOM05D004827 ORTHO05D005395 1.0e-20 104.0 72 72.2
Gorai.003G145300 Gossypium raimondii HOM05D004827 ORTHO05D005395 1.1e-19 100.5 138 45.7
PRCOL_00001503 Prasinoderma coloniale HOM05D004827 ORTHO05D005395 1.2e-16 90.5 118 41.5
CBR_g8005 Chara braunii HOM05D004827 ORTHO05D005395 5.0e-15 85.1 103 44.7
unitig_736.g22404 Utricularia gibba HOM05D004827 ORTHO05D005395 5.5e-14 81.6 55 70.9
MBI18_g02639_MAGBIO Magnolia biondii HOM05D004827 ORTHO05D005395 2.1e-13 79.7 62 61.3
CSS0012572 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 1.6e-08 63.5 34 82.4
Sabra04G0146000 Salix brachista HOM05D004827 ORTHO05D005395 2.7e-08 62.8 95 40.0
C07p01610 Brassica napus HOM05D004827 ORTHO05D005395 3.8e-07 58.9 30 93.3
PSO675G3243 Papaver somniferum HOM05D001382 ORTHO05D001266 3.2e-06 55.8 116 31.0
AUR62041712 Chenopodium quinoa HOM05D001382 ORTHO05D001266 4.2e-06 55.5 121 33.1
AUR62043389 Chenopodium quinoa HOM05D001382 ORTHO05D001266 4.2e-06 55.5 121 33.1
Pp3c1_34670 Physcomitrium patens HOM05D004827 ORTHO05D005395 4.2e-06 55.5 68 39.7
AUR62009298 Chenopodium quinoa HOM05D001382 ORTHO05D001266 5.5e-06 55.1 122 31.1
PSO541G5876 Papaver somniferum HOM05D001382 ORTHO05D001266 7.2e-06 54.7 116 30.2


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