Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p63260 Brassica napus HOM05D020860 ORTHO05D000129 9.3e-98 360.1 175 100.0
C07p01600 Brassica napus HOM05D020860 ORTHO05D000129 1.5e-84 316.2 162 94.4
BcaC01g02579 Brassica carinata HOM05D020860 ORTHO05D031811 1.1e-50 203.8 151 70.9
BcaB04g21208 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-17 93.2 169 32.5
BcaC09g48093 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-17 93.2 169 32.5
A03p36540 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-17 93.2 192 33.3
BraA03t12821Z Brassica rapa HOM05D000209 ORTHO05D000129 2.1e-17 93.2 192 33.3
A05p00430 Brassica napus HOM05D000209 ORTHO05D000129 6.2e-17 91.7 182 33.0
BraA05t19041Z Brassica rapa HOM05D000209 ORTHO05D000129 6.2e-17 91.7 182 33.0
Sp6g23470 Schrenkiella parvula HOM05D000209 ORTHO05D000129 6.2e-17 91.7 176 35.8
BcaC01g04182 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-16 90.5 193 32.6
C03p44150 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-16 90.1 193 32.6
BolC3t16690H Brassica oleracea HOM05D000209 ORTHO05D000129 1.8e-16 90.1 202 32.7
BcaB04g21206 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-16 89.4 174 31.6
BcaB04g21211 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-16 89.4 185 30.3
AT3G22650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.2e-16 88.6 165 32.7
BcaB04g18599 Brassica carinata HOM05D000209 ORTHO05D000129 5.2e-16 88.6 184 32.6
BcaB04g18600 Brassica carinata HOM05D000209 ORTHO05D000129 5.2e-16 88.6 184 32.6
Carub.0003s2280 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-16 88.2 166 31.3
CARHR098530 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.9e-16 87.8 148 36.5
C07p48490 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-15 86.7 171 31.0
BolC7t45354H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-15 86.7 171 31.0
A03p36550 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-15 86.3 192 30.7
Sp3g20410 Schrenkiella parvula HOM05D000209 ORTHO05D000129 2.6e-15 86.3 164 30.5
C07p48430 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-15 85.9 171 32.2
AT4G04690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.8e-15 85.1 168 32.1
Thhalv10022403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.8e-15 85.1 169 32.0
BraA01t04254Z Brassica rapa HOM05D000209 ORTHO05D000129 7.6e-15 84.7 174 33.3
A01p41820 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-14 84.0 174 33.3
BcaB01g05926 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-14 83.6 167 34.7
BcaB04g21210 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-14 83.6 159 34.6
A01p41830 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-14 83.6 174 33.3
A03p01940 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-14 83.6 167 34.7
A03p42860 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-14 83.6 166 31.3
A03p50240 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-14 83.6 171 31.6
BolC3t12782H Brassica oleracea HOM05D000209 ORTHO05D000129 1.7e-14 83.6 167 34.7
BraA03t09563Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-14 83.6 167 34.7
BraA03t13432Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-14 83.6 166 31.3
BcaC01g03433 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-14 83.2 166 31.9
C03p52640 Brassica napus HOM05D000209 ORTHO05D000129 2.2e-14 83.2 166 31.9
BolC3t17532H Brassica oleracea HOM05D000209 ORTHO05D000129 2.2e-14 83.2 166 31.9
BolC7t45357H Brassica oleracea HOM05D000209 ORTHO05D000129 2.2e-14 83.2 171 30.4
BcaC01g04181 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-14 82.8 193 32.6
C03p44170 Brassica napus HOM05D000209 ORTHO05D000129 2.9e-14 82.8 193 32.6
C03p44140 Brassica napus HOM05D000209 ORTHO05D000129 3.7e-14 82.4 197 33.0
BolC3t16689H Brassica oleracea HOM05D000209 ORTHO05D000129 3.7e-14 82.4 197 33.0
Thhalv10027458m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.9e-14 82.0 160 30.0
BraA03t12822Z Brassica rapa HOM05D000209 ORTHO05D000129 8.4e-14 81.3 192 30.2
BcaB04g19209 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-13 80.1 164 29.9
AL3G35490 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.2e-13 79.3 171 31.0
Aa31LG8G9170 Aethionema arabicum HOM05D000209 ORTHO05D000129 4.1e-13 79.0 205 28.3
BolC1t05401H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-13 79.0 190 30.5
BcaC09g48095 Brassica carinata HOM05D000209 ORTHO05D000129 7.1e-13 78.2 190 30.5
BcaC09g48098 Brassica carinata HOM05D000209 ORTHO05D000129 7.1e-13 78.2 190 30.5
A01p41870 Brassica napus HOM05D000209 ORTHO05D000129 7.1e-13 78.2 178 30.9
BcaB04g21207 Brassica carinata HOM05D000209 ORTHO05D000129 9.2e-13 77.8 172 33.1
BraA01t04256Z Brassica rapa HOM05D000209 ORTHO05D000129 9.2e-13 77.8 178 30.9
Aa31LG8G9190 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.2e-12 77.4 198 27.8
Aa31LG8G9180 Aethionema arabicum HOM05D000209 ORTHO05D000129 2.1e-12 76.6 191 31.4
BcaC09g48092 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-12 76.6 181 31.5
BolC1t05399H Brassica oleracea HOM05D000209 ORTHO05D000129 3.5e-12 75.9 178 31.5
Thhalv10015788m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-12 75.9 121 38.0
Aa31LG8G9220 Aethionema arabicum HOM05D000209 ORTHO05D000129 4.6e-12 75.5 190 26.8
BolC3t12821H Brassica oleracea HOM05D000209 ORTHO05D000129 7.8e-12 74.7 155 34.2
BraA03t09598Z Brassica rapa HOM05D000209 ORTHO05D000129 7.8e-12 74.7 158 32.9
Aa31LG5G23400 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.0e-11 74.3 163 31.3
BcaB03g15317 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-11 74.3 172 32.0
BcaB03g15318 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-11 74.3 172 32.0
Carub.0006s3242 Capsella rubella HOM05D000209 ORTHO05D000129 1.0e-11 74.3 186 28.5
BcaB04g18601 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-11 73.6 178 30.9
C03p02670 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-11 73.6 155 33.5
Aa31LG8G9160 Aethionema arabicum HOM05D000209 ORTHO05D000129 2.3e-11 73.2 174 31.0
Carub.0006s3251 Capsella rubella HOM05D000209 ORTHO05D000129 3.0e-11 72.8 186 28.5
BcaB03g16794 Brassica carinata HOM05D000209 ORTHO05D000129 5.1e-11 72.0 166 31.9
C03p02690 Brassica napus HOM05D000209 ORTHO05D000129 6.6e-11 71.6 161 33.5
BcaB01g05954 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-10 70.9 155 33.5
Carub.0003s0964 Capsella rubella HOM05D000209 ORTHO05D000129 1.5e-10 70.5 184 28.8
BcaB04g21204 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-10 70.1 120 35.0
BcaC05g29465 Brassica carinata HOM05D000903 ORTHO05D000731 1.9e-10 70.1 190 27.9
C05p57680 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-10 70.1 190 27.9
BolC5t34425H Brassica oleracea HOM05D000209 ORTHO05D000129 1.9e-10 70.1 190 27.9
CARHR099050 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.9e-10 70.1 179 29.1
Carub.0006s3259 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-10 69.7 173 30.1
BolC1t05397H Brassica oleracea HOM05D000209 ORTHO05D000129 5.6e-10 68.6 120 34.2
A02p13030 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-09 66.2 157 30.6
C02p21150 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-09 65.9 158 30.4
BolC3t12823H Brassica oleracea HOM05D000209 ORTHO05D000129 4.7e-09 65.5 155 34.2
BraA02t06359Z Brassica rapa HOM05D000209 ORTHO05D000129 4.7e-09 65.5 157 30.6
Thhalv10000601m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.2e-09 65.1 162 27.8
BcaC09g48335 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-08 63.5 186 29.6
C01p51240 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-08 63.5 186 29.6
BcaC03g14676 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-08 63.2 158 29.7
BolC2t08255H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-08 63.2 158 29.7
AT3G49520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.0e-08 62.4 165 24.8
AL5G29320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.8e-08 61.6 134 26.9
BolC3t17700H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-07 60.1 153 32.0
C03p54080 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-07 59.3 137 33.6
BolC1t05083H Brassica oleracea HOM05D000209 ORTHO05D000129 3.4e-07 59.3 186 29.0
AL5G29340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.4e-07 58.9 179 26.8
AT1G54550 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.6e-07 58.2 187 24.1
BcaB01g05955 Brassica carinata HOM05D000209 ORTHO05D000129 9.9e-07 57.8 121 32.2
BcaB04g21209 Brassica carinata HOM05D000209 ORTHO05D000129 9.9e-07 57.8 97 34.0
CARHR158520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 9.9e-07 57.8 180 28.9
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-06 57.0 172 27.9
BraA09t38187Z Brassica rapa HOM05D000209 ORTHO05D000129 3.8e-06 55.8 171 29.8
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.4e-06 55.1 180 26.1
AT3G49510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.4e-06 55.1 178 23.6
BcaB06g26443 Brassica carinata HOM05D000209 ORTHO05D000129 6.4e-06 55.1 183 26.8
BolC1t05079H Brassica oleracea HOM05D000209 ORTHO05D000129 6.4e-06 55.1 104 35.6
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.4e-06 54.7 157 29.3
BcaC09g48375 Brassica carinata HOM05D000209 ORTHO05D000129 8.4e-06 54.7 175 25.1
C01p50760 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-06 54.7 175 25.1


User provided reference genes

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