Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p61710 Brassica napus HOM05D003963 ORTHO05D004558 2.6e-187 659.4 605 100.0
BolC3t18432H Brassica oleracea HOM05D003963 ORTHO05D004558 4.1e-185 652.1 605 99.8
BraA06t26067Z Brassica rapa HOM05D003963 ORTHO05D004558 8.0e-173 611.3 605 96.7
A06p31280 Brassica napus HOM05D003963 ORTHO05D004558 3.6e-165 585.9 607 95.7
BcaC03g18430 Brassica carinata HOM05D003963 ORTHO05D004558 6.2e-157 558.5 622 92.3
Sp2g27620 Schrenkiella parvula HOM05D003963 ORTHO05D004558 3.5e-144 516.2 635 87.6
AL8G41940 Arabidopsis lyrata HOM05D003963 ORTHO05D004558 4.0e-140 502.7 636 86.3
Carub.0008s2535 Capsella rubella HOM05D003963 ORTHO05D004558 4.2e-137 492.7 639 86.2
AT5G64550 Arabidopsis thaliana HOM05D003963 ORTHO05D004558 5.4e-137 492.3 637 85.6
Thhalv10003819m.g Eutrema salsugineum HOM05D003963 ORTHO05D004558 1.2e-131 474.6 639 85.6
CARHR278520 Cardamine hirsuta HOM05D003963 ORTHO05D004558 7.4e-126 455.3 630 84.4
BcaB07g29747 Brassica carinata HOM05D003963 ORTHO05D004558 1.3e-114 417.9 608 84.5
A02p43350 Brassica napus HOM05D003963 ORTHO05D004558 9.0e-108 395.2 613 83.0
BraA02t09261Z Brassica rapa HOM05D003963 ORTHO05D004558 7.6e-107 392.1 610 83.3
C02p63440 Brassica napus HOM05D003963 ORTHO05D004558 8.5e-106 388.7 607 82.0
BolC2t12411H Brassica oleracea HOM05D003963 ORTHO05D004558 8.5e-106 388.7 607 82.0
Aa31LG1G17380 Aethionema arabicum HOM05D003963 ORTHO05D004558 3.9e-95 353.2 623 77.7
A09p08700 Brassica napus HOM05D003963 ORTHO05D004558 1.6e-88 331.3 609 76.4
BraA09t36518Z Brassica rapa HOM05D003963 ORTHO05D004558 4.7e-88 329.7 609 76.4
Aa31LG3G17400 Aethionema arabicum HOM05D003963 ORTHO05D004558 2.8e-77 293.9 640 69.4
Aa31sc1834G20 Aethionema arabicum HOM05D003963 ORTHO05D004558 2.0e-75 287.7 632 69.9
THA.LOC104799580 Tarenaya hassleriana HOM05D003963 ORTHO05D004558 7.5e-70 269.2 639 69.3
Sp6g33710 Schrenkiella parvula HOM05D003963 ORTHO05D004558 1.8e-60 238.0 618 69.7
CARHR203720 Cardamine hirsuta HOM05D003963 ORTHO05D004558 2.0e-59 234.6 607 70.2
Thhalv10013049m.g Eutrema salsugineum HOM05D003963 ORTHO05D004558 7.8e-59 232.6 618 68.8
AL6G20100 Arabidopsis lyrata HOM05D003963 ORTHO05D004558 1.3e-58 231.9 620 68.4
Potri.003G023300 Populus trichocarpa HOM05D003963 ORTHO05D004558 2.6e-54 217.6 653 62.6
TWI59G0617 Tripterygium wilfordii HOM05D003963 ORTHO05D004558 4.9e-53 213.4 658 64.4
Cpa.g.sc0.13 Carica papaya HOM05D003963 ORTHO05D004558 1.8e-52 211.5 650 63.7
FvH4_5g30651 Fragaria vesca HOM05D003963 ORTHO05D004558 1.8e-52 211.5 644 63.4
Sabra03G0014600 Salix brachista HOM05D003963 ORTHO05D004558 4.1e-52 210.3 653 62.6
AUR62027385 Chenopodium quinoa HOM05D003963 ORTHO05D004558 7.0e-52 209.5 642 62.8
Manes.04G062400 Manihot esculenta HOM05D003963 ORTHO05D004558 7.0e-52 209.5 657 62.4
AUR62031300 Chenopodium quinoa HOM05D003963 ORTHO05D004558 9.2e-52 209.1 640 62.5
Ciclev10000572m.g Citrus clementina HOM05D003963 ORTHO05D004558 4.6e-51 206.8 646 62.7
FAN04G2665 Fragaria x ananassa HOM05D003963 ORTHO05D004558 1.7e-50 204.9 643 63.3
FAN13G1550 Fragaria x ananassa HOM05D003963 ORTHO05D004558 3.9e-50 203.8 643 65.3
Sabra03G0014700 Salix brachista HOM05D003963 ORTHO05D004558 6.6e-50 203.0 643 63.3
TWI23G1041 Tripterygium wilfordii HOM05D003963 ORTHO05D004558 8.6e-50 202.6 657 61.9
AT5G09670 Arabidopsis thaliana HOM05D003963 ORTHO05D004558 1.1e-49 202.2 592 68.9
Potri.001G206600 Populus trichocarpa HOM05D003963 ORTHO05D004558 1.5e-49 201.8 652 62.0
RcHm_v2.0_Chr7g0225521 Rosa chinensis HOM05D003963 ORTHO05D004558 3.3e-49 200.7 648 62.3
Thecc.02G143400 Theobroma cacao HOM05D003963 ORTHO05D004558 1.6e-48 198.4 657 62.1
Duzib052G0219 Durio zibethinus HOM05D003963 ORTHO05D004558 1.4e-47 195.3 656 61.9
COL.COLO4_20869 Corchorus olitorius HOM05D003963 ORTHO05D004558 5.2e-47 193.4 656 61.9
MD08G1221900 Malus domestica HOM05D003963 ORTHO05D004558 1.3e-45 188.7 651 60.7
QL11p019412 Quercus lobata HOM05D003963 ORTHO05D004558 2.9e-45 187.6 654 61.0
MD15G1414300 Malus domestica HOM05D003963 ORTHO05D004558 1.4e-44 185.3 654 60.7
Prupe.1G559700 Prunus persica HOM05D003963 ORTHO05D004558 2.4e-44 184.5 649 61.0
ClCG06G009720 Citrullus lanatus HOM05D003963 ORTHO05D004558 3.2e-44 184.1 642 60.9
EL10Ac8g19340 Beta vulgaris HOM05D003963 ORTHO05D004558 5.4e-44 183.3 637 62.3
Gorai.013G063300 Gossypium raimondii HOM05D003963 ORTHO05D004558 1.2e-43 182.2 655 62.9
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 1.6e-43 181.8 652 61.0
Duzib248G1667 Durio zibethinus HOM05D003963 ORTHO05D004558 2.1e-43 181.4 651 61.6
Sed0018276 Sechium edule HOM05D003963 ORTHO05D004558 6.0e-43 179.9 646 60.5
Haze_10775 Corylus avellana HOM05D003963 ORTHO05D004558 1.0e-42 179.1 650 61.2
MELO3C020350.2 Cucumis melo HOM05D003963 ORTHO05D004558 1.0e-42 179.1 642 60.9
BcaC04g23312 Brassica carinata HOM05D003963 ORTHO05D004558 1.7e-42 178.3 583 68.1
Ah.14g085400 Amaranthus hybridus HOM05D003963 ORTHO05D004558 3.0e-42 177.6 638 61.1
CsaV3_2G011200 Cucumis sativus L. HOM05D003963 ORTHO05D004558 3.0e-42 177.6 642 61.4
BolC9t53891H Brassica oleracea HOM05D003963 ORTHO05D004558 3.9e-42 177.2 222 51.8
Gohir.D13G056000 Gossypium hirsutum HOM05D003963 ORTHO05D004558 5.0e-42 176.8 655 63.7
Ah.09g232110 Amaranthus hybridus HOM05D003963 ORTHO05D004558 1.5e-41 175.3 630 60.8
Cfa005579 Carpinus fangiana HOM05D003963 ORTHO05D004558 1.9e-41 174.9 648 61.1
CANSAT11G0470 Cannabis sativa HOM05D003963 ORTHO05D004558 2.8e-40 171.0 649 61.3
Glyma.08G074900 Glycine max HOM05D003963 ORTHO05D004558 4.7e-40 170.2 650 60.9
VMungo0251G0315 Vigna mungo HOM05D003963 ORTHO05D004558 4.7e-40 170.2 649 60.4
CSS0000527 Camellia sinensis var. sinensis HOM05D003963 ORTHO05D004558 6.2e-40 169.9 657 62.1
CSS0022227 Camellia sinensis var. sinensis HOM05D003963 ORTHO05D004558 6.2e-40 169.9 657 62.1
Glyma.05G120100 Glycine max HOM05D003963 ORTHO05D004558 6.2e-40 169.9 650 61.1
Gohir.A13G065700 Gossypium hirsutum HOM05D003963 ORTHO05D004558 1.8e-39 168.3 655 63.4
C09p09830 Brassica napus HOM05D003963 ORTHO05D004558 5.8e-38 163.3 577 65.3
Ca_18336_v3 Cicer arietinum L. HOM05D003963 ORTHO05D004558 7.5e-38 162.9 649 60.4
Gorai.005G217900 Gossypium raimondii HOM05D003963 ORTHO05D004558 2.9e-37 161.0 650 59.4
Hma1.2p1_0217F.1_g091740 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 2.9e-37 161.0 642 60.4
Gohir.D02G195000 Gossypium hirsutum HOM05D003963 ORTHO05D004558 8.3e-37 159.5 650 59.4
DCAR_029216 Daucus carota HOM05D003963 ORTHO05D004558 1.1e-36 159.1 663 60.9
Dinv19323 Davidia involucrata HOM05D003963 ORTHO05D004558 1.9e-36 158.3 641 59.4
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 1.9e-36 158.3 638 60.5
Hma1.2p1_0557F.1_g178060 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 1.9e-36 158.3 628 62.4
vmacro01810 Vaccinium macrocarpon HOM05D003963 ORTHO05D004558 2.4e-36 157.9 638 59.9
BcaB05g21539 Brassica carinata HOM05D003963 ORTHO05D004558 9.2e-36 156.0 610 61.8
Cc02_g21840 Coffea canephora HOM05D003963 ORTHO05D004558 9.2e-36 156.0 656 58.1
Eucgr.I02691 Eucalyptus grandis HOM05D003963 ORTHO05D004558 9.2e-36 156.0 657 59.5
BcaB04g19973 Brassica carinata HOM05D003963 ORTHO05D004558 1.2e-35 155.6 138 61.6
ECA236G3037 Erigeron canadensis HOM05D003963 ORTHO05D004558 1.2e-35 155.6 619 64.0
A02p00100 Brassica napus HOM05D003963 ORTHO05D004558 3.5e-35 154.1 585 62.7
Phvul.002G206700 Phaseolus vulgaris HOM05D003963 ORTHO05D004558 3.5e-35 154.1 596 62.2
Actinidia28070 Actinidia chinensis HOM05D003963 ORTHO05D004558 6.0e-35 153.3 650 58.6
HanXRQChr11g0337121 Helianthus annuus HOM05D003963 ORTHO05D004558 6.0e-35 153.3 619 61.7
Medtr4g094290 Medicago truncatula HOM05D003963 ORTHO05D004558 7.8e-35 152.9 649 59.3
GSVIVG01038733001 Vitis vinifera HOM05D003963 ORTHO05D004558 1.0e-34 152.5 230 48.7
Oeu037198.2 Olea europaea HOM05D003963 ORTHO05D004558 1.3e-34 152.1 651 58.8
Sc14g0002710 Simmondsia chinensis HOM05D003963 ORTHO05D004558 1.3e-34 152.1 648 58.5
Lj4g0008212 Lotus japonicus HOM05D003963 ORTHO05D004558 2.3e-34 151.4 630 60.8
CiPaw.05G038900 Carya illinoinensis HOM05D003963 ORTHO05D004558 3.0e-34 151.0 648 60.0
Rhsim11G0134700 Rhododendron simsii HOM05D003963 ORTHO05D004558 3.9e-34 150.6 640 60.2
BraA02t04995Z Brassica rapa HOM05D003963 ORTHO05D004558 5.1e-34 150.2 586 65.4
Atru.chr6.908 Acer truncatum HOM05D003963 ORTHO05D004558 1.5e-33 148.7 259 43.2
Lsat_1_v5_gn_7_80140 Lactuca sativa HOM05D003963 ORTHO05D004558 4.7e-32 143.7 599 61.4
Lalb_Chr13g0291591 Lupinus albus HOM05D003963 ORTHO05D004558 1.1e-31 142.5 653 60.3
Nn1g05173 Nelumbo nucifera HOM05D003963 ORTHO05D004558 1.4e-31 142.1 653 58.0
TAR381G1468 Trochodendron aralioides HOM05D003963 ORTHO05D004558 1.8e-31 141.7 654 62.2
CiPaw.06G151200 Carya illinoinensis HOM05D003963 ORTHO05D004558 3.1e-31 141.0 655 57.9
Migut.B00637 Erythranthe guttata HOM05D003963 ORTHO05D004558 3.1e-31 141.0 596 60.7
Gohir.A03G171700 Gossypium hirsutum HOM05D003963 ORTHO05D004558 4.0e-31 140.6 587 62.9
CAN.G523.95 Capsicum annuum HOM05D003963 ORTHO05D004558 2.0e-30 138.3 628 61.5
Nitab4.5_0002865g0100 Nicotiana tabacum HOM05D003963 ORTHO05D004558 2.6e-30 137.9 599 61.6
Peaxi162Scf00001g00041 Petunia axillaris HOM05D003963 ORTHO05D004558 2.6e-30 137.9 653 58.2
Peaxi162Scf00001g00043 Petunia axillaris HOM05D003963 ORTHO05D004558 2.6e-30 137.9 653 58.2
Solyc01g104910.3 Solanum lycopersicum HOM05D003963 ORTHO05D004558 1.3e-29 135.6 640 60.5
PGSC0003DMG400029740 Solanum tuberosum HOM05D003963 ORTHO05D004558 1.3e-29 135.6 631 61.6
Psat7g097440 Pisum sativum HOM05D003963 ORTHO05D004558 1.7e-29 135.2 649 58.7
Sopen01g047420 Solanum pennellii HOM05D003963 ORTHO05D004558 1.7e-29 135.2 639 60.7
Peaxi162Scf00003g00367 Petunia axillaris HOM05D003963 ORTHO05D004558 2.4e-28 131.3 654 57.3
Actinidia00250 Actinidia chinensis HOM05D003963 ORTHO05D004558 4.1e-28 130.6 597 59.8
Nn5g28887 Nelumbo nucifera HOM05D003963 ORTHO05D004558 4.1e-28 130.6 265 41.9
PSO541G3622 Papaver somniferum HOM05D003963 ORTHO05D004558 4.1e-28 130.6 654 59.5
Nitab4.5_0003748g0020 Nicotiana tabacum HOM05D003963 ORTHO05D004558 5.4e-28 130.2 633 58.9
Oeu000233.2 Olea europaea HOM05D003963 ORTHO05D004558 5.4e-28 130.2 632 60.9
SalBow5G2159 Salvia bowleyana HOM05D003963 ORTHO05D004558 9.2e-28 129.4 611 60.6
Atru.chr10.2100 Acer truncatum HOM05D003963 ORTHO05D004558 4.6e-27 127.1 234 65.0
BcaC03g13269 Brassica carinata HOM05D003963 ORTHO05D004558 1.0e-26 125.9 565 52.9
BolC2t06362H Brassica oleracea HOM05D006324 ORTHO05D007463 1.0e-26 125.9 565 52.9
TPR.G10467 Trifolium pratense HOM05D003963 ORTHO05D004558 2.3e-26 124.8 254 39.8
Hund06704 Selenicereus undatus HOM05D003963 ORTHO05D004558 3.0e-26 124.4 573 63.5
Aqoxy6G00464 Aquilegia oxysepala HOM05D003963 ORTHO05D004558 1.5e-25 122.1 623 61.3
MSTRG.16566 Avicennia marina HOM05D003963 ORTHO05D004558 1.5e-25 122.1 633 57.8
Oeu037196.1 Olea europaea HOM05D003963 ORTHO05D004558 2.5e-25 121.3 263 39.9
SalBow6G3757 Salvia bowleyana HOM05D003963 ORTHO05D004558 1.2e-24 119.0 617 59.3
SalBow6G4534 Salvia bowleyana HOM05D003963 ORTHO05D004558 1.2e-24 119.0 617 59.3
Atru.chr10.2101 Acer truncatum HOM05D003963 ORTHO05D004558 1.8e-23 115.2 244 39.3
PSO675G1096 Papaver somniferum HOM05D003963 ORTHO05D004558 3.1e-23 114.4 655 58.0
Lalb_Chr12g0208491 Lupinus albus HOM05D003963 ORTHO05D004558 4.0e-23 114.0 647 57.3
MBI05_g46461_MAGBIO Magnolia biondii HOM05D003963 ORTHO05D004558 5.8e-22 110.2 632 60.1
ECA234G1426 Erigeron canadensis HOM05D003963 ORTHO05D004558 4.9e-21 107.1 220 39.1
Rhsim11G0135400 Rhododendron simsii HOM05D003963 ORTHO05D004558 1.6e-19 102.1 255 37.6
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 4.6e-19 100.5 618 58.4
Lalb_Chr07g0189461 Lupinus albus HOM05D003963 ORTHO05D004558 5.1e-18 97.1 645 56.4
unitig_62.g23623 Utricularia gibba HOM05D003963 ORTHO05D004558 5.1e-18 97.1 205 39.0
Peaxi162Scf00152g01123 Petunia axillaris HOM05D003963 ORTHO05D004558 6.6e-18 96.7 653 54.5
Lj5C243T4 Lonicera japonica HOM05D003963 ORTHO05D004558 3.3e-17 94.4 610 56.9
SGA_v2.0_scaffold45G17289 Striga asiatica HOM05D003963 ORTHO05D004558 3.6e-16 90.9 220 38.6
Os04g0640900 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 6.2e-16 90.1 269 35.3
CDE02G0069 Ceratophyllum demersum HOM05D003963 ORTHO05D004558 3.1e-15 87.8 215 35.8
Os04g0458200 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 4.0e-15 87.4 236 32.6
CDE05G1767 Ceratophyllum demersum HOM05D003963 ORTHO05D004558 2.0e-14 85.1 189 37.6
Zm00001eb423980 Zea mays HOM05D003963 ORTHO05D004558 1.3e-13 82.4 215 32.6
Lj9P318T69 Lonicera japonica HOM05D003963 ORTHO05D004558 2.2e-13 81.6 440 69.8
Zm00001eb080920 Zea mays HOM05D003963 ORTHO05D004558 8.4e-13 79.7 205 34.1
Zm00001eb244890 Zea mays HOM05D003963 ORTHO05D004558 8.4e-13 79.7 193 35.8
Zm00001eb068980 Zea mays HOM05D003963 ORTHO05D004558 7.1e-12 76.6 207 35.3
ATR0564G216 Amborella trichopoda HOM05D003963 ORTHO05D004558 9.3e-12 76.3 209 38.3
HanXRQChr10g0293231 Helianthus annuus HOM05D003963 ORTHO05D004558 2.1e-11 75.1 215 34.0
Zm00001eb182980 Zea mays HOM05D003963 ORTHO05D004558 2.1e-11 75.1 258 32.6
Haze_09989 Corylus avellana HOM05D003963 ORTHO05D004558 1.3e-10 72.4 109 44.0
Os02g0575700 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 1.3e-10 72.4 257 30.4
SEGI_28658 Sequoiadendron giganteum HOM05D003548 ORTHO05D004066 3.9e-10 70.9 155 38.7
HPP92_027148 Vanilla planifolia HOM05D003963 ORTHO05D004558 8.7e-10 69.7 198 35.4
Zm00001eb347870 Zea mays HOM05D003963 ORTHO05D010684 1.5e-09 68.9 209 33.5
Nn1g01756 Nelumbo nucifera HOM05D003548 ORTHO05D004066 2.0e-06 58.5 34 73.5
Lsat_1_v5_gn_5_106681 Lactuca sativa HOM05D003963 ORTHO05D004558 2.6e-06 58.2 602 43.5
PSO135G0411 Papaver somniferum HOM05D003548 ORTHO05D004066 2.6e-06 58.2 44 63.6
PSO384G2366 Papaver somniferum HOM05D003548 ORTHO05D004066 2.6e-06 58.2 44 63.6
Pp3c7_8590 Physcomitrium patens HOM05D031910 ORTHO05D004558 3.4e-06 57.8 110 38.2
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 4.5e-06 57.4 58 55.2
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 5.8e-06 57.0 97 37.1
ECA232G3387 Erigeron canadensis HOM05D003548 ORTHO05D004066 5.8e-06 57.0 102 39.2
HPP92_016461 Vanilla planifolia HOM05D003963 ORTHO05D004558 5.8e-06 57.0 178 33.7
Pp3c11_24820 Physcomitrium patens HOM05D031910 ORTHO05D004558 7.6e-06 56.6 173 31.2
CDE04G3080 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 9.9e-06 56.2 58 55.2


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