Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 5.6e-29 130.2 62 100.0
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 8.6e-22 106.3 60 81.7
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 1.1e-21 105.9 60 80.0
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 6.2e-20 100.1 58 79.3
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 1.3e-17 92.4 58 75.9
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 3.0e-14 81.3 58 65.5
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 3.9e-14 80.9 58 65.5
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 7.3e-13 76.6 58 62.1
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 7.3e-13 76.6 58 62.1
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 7.3e-13 76.6 58 62.1
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 9.5e-13 76.3 58 62.1
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-12 75.9 58 62.1
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-12 75.9 58 62.1
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 2.1e-12 75.1 55 65.5
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.6e-12 74.3 58 60.3
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 6.2e-12 73.6 55 63.6
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.2e-12 73.6 58 60.3
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 6.2e-12 73.6 60 60.0
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-11 72.4 58 60.3
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 1.8e-11 72.0 55 61.8
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.1e-11 71.2 60 58.3
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 4.0e-11 70.9 43 62.8
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 5.2e-11 70.5 59 55.9
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.8e-11 70.1 59 57.6
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-10 69.3 56 58.9
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 1.5e-10 68.9 53 62.3
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 2.0e-10 68.6 58 58.6
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 3.4e-10 67.8 60 61.7
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.4e-10 67.8 58 60.3
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 5.8e-10 67.0 60 55.0
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 5.8e-10 67.0 53 58.5
Thhalv10006404m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 7.5e-10 66.6 58 62.1
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 7.5e-10 66.6 55 60.0
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 7.5e-10 66.6 53 60.4
Carub.0005s0142 Capsella rubella HOM05D007671 ORTHO05D009777 1.7e-09 65.5 31 87.1
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 1.7e-09 65.5 55 56.4
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 2.9e-09 64.7 58 55.2
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 4.9e-09 63.9 49 53.1
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 1.1e-08 62.8 54 55.6
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-08 62.4 57 54.4
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 2.4e-08 61.6 58 53.4
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 7.1e-08 60.1 57 52.6
Migut.N02115 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.6e-07 58.9 41 68.3
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.0e-06 56.2 53 52.8
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.6e-06 53.5 41 63.4
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 8.6e-06 53.1 45 48.9


User provided reference genes

Program Settings