Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 3.7e-109 398.3 207 100.0
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.3e-102 374.8 205 96.6
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 2.7e-96 355.5 205 92.7
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-91 339.7 198 91.4
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 5.7e-86 321.2 170 97.6
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 3.7e-85 318.5 170 96.5
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 6.3e-85 317.8 170 96.5
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-78 296.6 206 78.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-78 296.2 170 91.2
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-78 295.8 208 80.3
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 6.9e-76 287.7 170 88.2
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 2.6e-70 269.2 160 87.5
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 4.1e-52 208.8 164 69.5
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 9.1e-52 207.6 164 69.5
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 7.7e-51 204.5 163 68.7
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.8e-50 202.2 164 68.3
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-49 199.5 164 67.1
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 4.7e-48 195.3 155 67.7
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 6.1e-48 194.9 155 67.7
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 6.8e-47 191.4 155 67.1
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 8.9e-47 191.0 155 67.1
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.6e-46 189.5 158 67.1
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 3.4e-46 189.1 158 67.1
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 7.5e-46 188.0 155 65.8
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 3.7e-45 185.7 155 65.8
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 3.7e-45 185.7 93 96.8
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-43 180.6 148 68.2
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-43 178.7 145 69.0
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-42 177.6 151 64.2
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 8.6e-42 174.5 148 67.6
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-41 174.1 155 65.2
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 9.5e-41 171.0 139 66.2
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-40 170.6 146 67.1
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 3.6e-40 169.1 123 73.2
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.3e-39 166.4 178 55.1
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 5.2e-39 165.2 143 65.0
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-38 164.1 81 98.8
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 9.8e-38 161.0 155 61.9
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-37 159.8 92 95.7
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 2.2e-37 159.8 92 95.7
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 3.7e-37 159.1 126 67.5
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 8.3e-37 157.9 150 62.0
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-36 157.1 151 55.6
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.4e-36 157.1 133 66.9
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-36 157.1 133 66.9
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.4e-36 157.1 126 66.7
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 7.0e-36 154.8 133 66.9
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 9.2e-36 154.5 121 68.6
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-35 154.1 142 60.6
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.6e-35 153.7 126 65.9
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-35 153.3 133 66.9
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-34 151.0 139 61.9
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-34 150.6 81 90.1
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-31 140.2 173 50.3
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 7.5e-30 134.8 181 49.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 3.2e-28 129.4 170 44.7
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 5.4e-28 128.6 169 48.5
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 7.0e-28 128.3 124 58.9
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.1e-27 126.7 66 89.4
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-25 120.6 131 54.2
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 9.5e-25 117.9 105 63.8
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-24 117.5 85 68.2
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-24 116.7 110 54.5
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 4.0e-23 112.5 150 47.3
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 6.8e-23 111.7 64 81.2
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-22 109.8 64 79.7
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 4.4e-22 109.0 109 61.5
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 4.4e-22 109.0 153 44.4
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 4.4e-22 109.0 137 48.2
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 5.8e-22 108.6 138 47.8
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 5.8e-22 108.6 55 92.7
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 2.2e-21 106.7 147 49.7
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 2.2e-21 106.7 147 49.7
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-19 100.5 134 43.3
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-19 99.8 157 42.0
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-19 99.0 55 81.8
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-18 97.8 57 94.7
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-17 94.0 55 78.2
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 7.3e-17 91.7 142 40.8
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 1.2e-16 90.9 122 45.1
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 1.2e-16 90.9 122 45.1
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 1.6e-16 90.5 121 45.5
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 3.6e-16 89.4 122 43.4
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 8.1e-16 88.2 118 45.8
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 8.1e-16 88.2 83 60.2
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 1.1e-15 87.8 126 40.5
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-15 87.8 121 45.5
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 5.2e-15 85.5 113 49.6
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 6.8e-15 85.1 132 46.2
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 1.5e-14 84.0 48 81.2
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-14 83.6 72 54.2
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-14 83.2 47 91.5
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 7.6e-14 81.6 85 52.9
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 9.9e-14 81.3 85 51.8
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-13 80.9 85 51.8
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.3e-13 80.9 45 93.3
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-13 80.9 44 90.9
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-13 80.9 44 90.9
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-13 80.1 85 51.8
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 1.9e-12 77.0 99 51.5
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-12 75.9 56 76.8
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 5.4e-12 75.5 175 33.1
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 5.4e-12 75.5 69 63.8
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 7.1e-12 75.1 99 50.5
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 1.2e-11 74.3 126 36.5
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-11 74.3 99 50.5
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-11 73.9 90 45.6
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 2.1e-11 73.6 171 33.3
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 2.1e-11 73.6 69 60.9
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 6.0e-11 72.0 39 97.4
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 6.0e-11 72.0 39 97.4
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 6.0e-11 72.0 39 97.4
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 1.7e-10 70.5 135 35.6
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.7e-10 70.5 68 55.9
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 3.0e-10 69.7 39 94.9
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 6.6e-10 68.6 39 92.3
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 6.6e-10 68.6 39 92.3
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 6.6e-10 68.6 39 92.3
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-09 67.8 39 92.3
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.5e-09 67.4 100 48.0
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-09 67.4 98 36.7
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 2.5e-09 66.6 193 30.1
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-09 66.6 52 61.5
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 3.3e-09 66.2 69 56.5
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 7.3e-09 65.1 38 78.9
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 7.3e-09 65.1 106 39.6
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 9.6e-09 64.7 78 42.3
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 1.2e-08 64.3 100 45.0
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-08 63.9 55 50.9
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 3.6e-08 62.8 135 32.6
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.4e-07 60.8 60 58.3
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 2.4e-07 60.1 58 48.3
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 3.1e-07 59.7 197 29.4
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 6.9e-07 58.5 75 41.3
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 6.9e-07 58.5 75 41.3
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 6.9e-07 58.5 154 33.1
BolC9t53917H Brassica oleracea HOM05D008062 ORTHO05D011707 1.5e-06 57.4 154 32.5
BraA05t20613Z Brassica rapa HOM05D008062 ORTHO05D008395 1.5e-06 57.4 154 32.5
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 3.4e-06 56.2 120 32.5
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 7.6e-06 55.1 49 59.2
C04p26220 Brassica napus HOM05D004128 ORTHO05D040950 7.6e-06 55.1 34 88.2
BolC4t24184H Brassica oleracea HOM05D004128 ORTHO05D040950 7.6e-06 55.1 34 88.2
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 7.6e-06 55.1 56 46.4
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 7.6e-06 55.1 56 44.6
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 7.6e-06 55.1 56 44.6
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 9.9e-06 54.7 185 29.2
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 9.9e-06 54.7 92 35.9
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 9.9e-06 54.7 49 61.2
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 9.9e-06 54.7 80 40.0


User provided reference genes

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