Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 5.8e-100 367.5 175 100.0
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 8.2e-78 293.9 145 97.2
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 3.4e-76 288.5 145 95.2
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 9.4e-74 280.4 135 100.0
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 2.9e-51 205.7 104 96.2
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 5.7e-39 164.9 90 86.7
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 9.8e-39 164.1 90 85.6
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 9.8e-39 164.1 90 85.6
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 4.9e-38 161.8 90 84.4
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 6.4e-38 161.4 90 84.4
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 6.4e-38 161.4 90 84.4
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 1.2e-33 147.1 80 88.8
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 4.7e-33 145.2 104 67.3
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 8.0e-33 144.4 87 79.3
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 3.1e-32 142.5 89 76.4
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 4.0e-32 142.1 105 65.7
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 3.7e-30 135.6 105 62.9
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.6e-28 130.2 90 70.0
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 3.0e-27 125.9 102 62.7
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 3.0e-27 125.9 87 67.8
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 8.6e-27 124.4 87 69.0
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 8.6e-27 124.4 87 66.7
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 2.5e-26 122.9 87 67.8
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 3.3e-26 122.5 87 67.8
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 3.3e-26 122.5 87 67.8
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.2e-25 120.6 87 69.0
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 2.8e-25 119.4 87 66.7
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 3.6e-25 119.0 94 64.9
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 3.6e-25 119.0 87 63.2
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 1.2e-23 114.0 86 66.3
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 1.5e-23 113.6 87 62.1
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 1.5e-23 113.6 98 61.2
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 2.0e-23 113.2 87 60.9
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 5.8e-23 111.7 87 59.8
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 2.9e-22 109.4 87 58.6
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 2.9e-22 109.4 87 58.6
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 3.7e-22 109.0 92 57.6
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 3.7e-22 109.0 97 52.6
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 6.4e-22 108.2 85 62.4
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 1.9e-21 106.7 97 54.6
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 2.4e-21 106.3 92 53.3
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 9.2e-21 104.4 86 53.5
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 9.2e-21 104.4 88 55.7
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 1.2e-20 104.0 93 52.7
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 1.2e-20 104.0 106 47.2
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 1.6e-20 103.6 93 52.7
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 2.1e-20 103.2 85 57.6
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 2.7e-20 102.8 85 56.5
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 3.5e-20 102.4 97 51.5
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 4.6e-20 102.1 85 56.5
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 7.8e-20 101.3 85 55.3
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 7.8e-20 101.3 85 55.3
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.0e-19 100.9 85 52.9
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 1.0e-19 100.9 86 51.2
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 1.7e-19 100.1 106 49.1
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 1.7e-19 100.1 132 41.7
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 3.0e-19 99.4 92 50.0
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 3.0e-19 99.4 85 51.8
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 3.9e-19 99.0 92 54.3
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 3.9e-19 99.0 103 46.6
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 5.1e-19 98.6 85 52.9
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 5.1e-19 98.6 85 54.1
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 6.6e-19 98.2 105 48.6
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 6.6e-19 98.2 105 48.6
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 8.6e-19 97.8 85 50.6
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 1.1e-18 97.4 99 48.5
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 2.5e-18 96.3 85 51.8
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.5e-18 96.3 85 50.6
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 3.3e-18 95.9 86 50.0
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 3.3e-18 95.9 92 51.1
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 4.3e-18 95.5 85 50.6
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 4.3e-18 95.5 85 50.6
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 4.3e-18 95.5 85 51.8
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 4.3e-18 95.5 86 51.2
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 9.5e-18 94.4 106 47.2
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 9.5e-18 94.4 106 47.2
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 1.6e-17 93.6 85 50.6
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.6e-17 93.6 92 47.8
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 1.6e-17 93.6 86 50.0
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.1e-17 93.2 85 49.4
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.1e-17 93.2 85 49.4
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 2.8e-17 92.8 85 50.6
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 3.6e-17 92.4 100 41.0
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 4.7e-17 92.0 85 48.2
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 4.7e-17 92.0 85 45.9
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 4.7e-17 92.0 102 44.1
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 6.2e-17 91.7 85 49.4
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 6.2e-17 91.7 85 45.9
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 8.1e-17 91.3 85 50.6
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 8.1e-17 91.3 86 47.7
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 1.1e-16 90.9 98 42.9
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 1.1e-16 90.9 54 83.3
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 1.1e-16 90.9 85 47.1
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 1.1e-16 90.9 85 49.4
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 1.1e-16 90.9 85 47.1
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 1.4e-16 90.5 92 45.7
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 1.8e-16 90.1 94 45.7
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 3.1e-16 89.4 94 44.7
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 3.1e-16 89.4 98 41.8
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 6.8e-16 88.2 98 40.8
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 8.9e-16 87.8 88 44.3
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 8.9e-16 87.8 92 47.8
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.2e-15 87.4 90 46.7
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 1.5e-15 87.0 98 40.8
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 2.0e-15 86.7 104 43.3
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 2.6e-15 86.3 88 45.5
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 2.6e-15 86.3 89 47.2
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 3.4e-15 85.9 92 45.7
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.4e-15 85.9 100 44.0
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 3.4e-15 85.9 92 44.6
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 4.4e-15 85.5 63 66.7
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 5.8e-15 85.1 88 42.0
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 5.8e-15 85.1 88 44.3
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 7.6e-15 84.7 92 46.7
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 7.6e-15 84.7 93 46.2
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 7.6e-15 84.7 88 44.3
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 9.9e-15 84.3 96 45.8
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 1.3e-14 84.0 88 45.5
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.7e-14 83.6 86 43.0
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 1.7e-14 83.6 97 44.3
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 3.7e-14 82.4 86 46.5
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 3.7e-14 82.4 86 46.5
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 3.7e-14 82.4 100 42.0
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 4.9e-14 82.0 86 43.0
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 1.1e-13 80.9 85 42.4
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.1e-13 80.9 86 43.0
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 1.1e-13 80.9 86 44.2
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 1.4e-13 80.5 84 48.8
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 2.4e-13 79.7 86 43.0
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 2.4e-13 79.7 86 43.0
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 2.4e-13 79.7 88 40.9
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 2.4e-13 79.7 85 41.2
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 3.2e-13 79.3 100 40.0
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 4.1e-13 79.0 86 43.0
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 4.1e-13 79.0 85 42.4
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 7.1e-13 78.2 86 41.9
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 3.5e-12 75.9 84 44.0
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 3.5e-12 75.9 85 40.0
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 3.5e-12 75.9 85 40.0
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 6.0e-12 75.1 88 39.8
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 7.8e-12 74.7 78 46.2
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 1.0e-11 74.3 86 41.9
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 1.7e-11 73.6 90 43.3
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 1.7e-11 73.6 85 42.4
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 1.7e-11 73.6 85 41.2
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 5.1e-11 72.0 86 39.5
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.5e-10 70.5 85 41.2
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 1.9e-10 70.1 85 41.2
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 3.3e-10 69.3 84 42.9
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 9.6e-10 67.8 93 34.4
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 2.8e-09 66.2 84 38.1
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 3.6e-09 65.9 93 37.6
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 8.1e-09 64.7 93 37.6
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 1.4e-08 63.9 85 37.6
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 3.4e-07 59.3 52 51.9
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 3.4e-07 59.3 52 51.9
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 4.4e-07 58.9 95 33.7
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 1.3e-06 57.4 86 36.0


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