Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p60290 Brassica napus HOM05D008820 ORTHO05D021986 2.2e-16 87.8 44 100.0
BolC3t18291H Brassica oleracea HOM05D008820 ORTHO05D021986 2.2e-16 87.8 44 100.0
A06p08450 Brassica napus HOM05D008820 ORTHO05D021986 9.8e-12 72.4 43 79.1
BraA06t24041Z Brassica rapa HOM05D008820 ORTHO05D021986 9.8e-12 72.4 43 79.1
BraA01t02066Z Brassica rapa HOM05D008820 ORTHO05D021986 2.2e-11 71.2 43 79.1
A06p21720 Brassica napus HOM05D008820 ORTHO05D021986 5.4e-10 66.6 43 72.1
A09p15380 Brassica napus HOM05D008820 ORTHO05D011139 2.2e-08 61.2 36 80.6
Sp2g00990 Schrenkiella parvula HOM05D008820 ORTHO05D011139 2.2e-08 61.2 36 80.6
BcaB07g31557 Brassica carinata HOM05D008820 ORTHO05D011139 2.9e-08 60.8 36 80.6
BcaC04g22692 Brassica carinata HOM05D008820 ORTHO05D011139 2.9e-08 60.8 36 80.6
C09p16490 Brassica napus HOM05D008820 ORTHO05D011139 2.9e-08 60.8 36 80.6
BolC9t54559H Brassica oleracea HOM05D008820 ORTHO05D011139 2.9e-08 60.8 36 80.6
BraA09t37032Z Brassica rapa HOM05D008820 ORTHO05D011139 2.9e-08 60.8 36 80.6
BcaNung06083 Brassica carinata HOM05D008820 ORTHO05D011139 3.8e-08 60.5 36 80.6
C09p18650 Brassica napus HOM05D008820 ORTHO05D011139 3.8e-08 60.5 36 80.6
BraA09t37180Z Brassica rapa HOM05D008820 ORTHO05D011139 6.5e-08 59.7 36 77.8
Thhalv10023318m.g Eutrema salsugineum HOM05D008820 ORTHO05D011139 8.5e-08 59.3 36 75.0
A09p13800 Brassica napus HOM05D008820 ORTHO05D011139 1.5e-07 58.5 36 77.8
AL2G11560 Arabidopsis lyrata HOM05D008820 ORTHO05D011139 2.5e-07 57.8 36 75.0
AT1G63670 Arabidopsis thaliana HOM05D008820 ORTHO05D011139 2.5e-07 57.8 36 75.0
CARHR047670 Cardamine hirsuta HOM05D008820 ORTHO05D011139 3.2e-07 57.4 36 75.0
BolC9t54760H Brassica oleracea HOM05D008820 ORTHO05D011139 4.2e-07 57.0 36 72.2
Carub.0002s0118 Capsella rubella HOM05D008820 ORTHO05D011139 5.5e-07 56.6 36 72.2


User provided reference genes

Program Settings