Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.2e-193 678.7 327 100.0
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.1e-192 676.4 327 99.4
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.8e-190 669.1 327 97.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 8.7e-190 666.8 327 97.6
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.4e-187 658.7 327 96.3
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 2.6e-170 602.1 327 87.8
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.4e-168 596.3 287 98.6
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 5.7e-157 557.8 327 82.3
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.1e-152 543.5 324 77.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 2.1e-151 539.3 327 79.5
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 5.9e-146 521.2 321 74.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 7.7e-146 520.8 326 75.2
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.7e-145 519.6 321 76.0
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.9e-145 518.8 321 73.8
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 8.5e-145 517.3 325 72.9
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 8.5e-145 517.3 327 74.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.9e-144 516.2 323 73.4
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.2e-144 515.4 333 76.3
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.2e-144 515.4 326 73.9
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 5.5e-144 514.6 319 75.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.6e-143 511.9 326 74.8
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.0e-142 508.8 327 76.1
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 4.0e-142 508.4 323 73.1
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 7.5e-141 504.2 324 74.4
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.8e-139 499.6 326 71.5
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 2.4e-139 499.2 318 72.3
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 5.3e-139 498.0 325 68.9
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 2.7e-138 495.7 316 71.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 5.9e-138 494.6 323 70.6
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 5.0e-137 491.5 321 71.3
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 8.5e-137 490.7 323 70.0
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.9e-136 489.6 320 70.9
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 6.1e-135 484.6 323 70.6
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.0e-134 481.9 323 70.3
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.7e-132 476.5 326 69.3
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.8e-132 475.7 325 66.8
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.2e-130 470.3 283 74.6
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.2e-130 470.3 286 74.5
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 6.1e-127 458.0 228 99.1
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 3.4e-125 452.2 322 66.5
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 3.4e-125 452.2 319 65.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 3.7e-124 448.7 318 65.7
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.4e-123 446.8 325 65.2
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.2e-123 445.7 330 65.8
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 8.6e-121 437.6 321 65.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 8.6e-121 437.6 323 65.0
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.1e-120 437.2 318 63.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 4.3e-120 435.3 311 68.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 4.7e-119 431.8 323 63.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.0e-118 430.6 325 63.4
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 1.8e-118 429.9 325 63.4
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 3.1e-118 429.1 326 62.9
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 4.0e-118 428.7 317 64.0
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 4.0e-118 428.7 323 62.8
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 6.8e-118 427.9 326 62.9
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 6.8e-118 427.9 325 63.1
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 6.8e-118 427.9 326 63.8
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 1.2e-117 427.2 324 63.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 2.0e-117 426.4 326 62.9
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.0e-117 426.4 323 64.4
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 4.4e-117 425.2 323 63.2
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 5.8e-117 424.9 323 61.9
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 9.8e-117 424.1 323 62.8
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.3e-116 423.7 317 63.4
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.7e-116 423.3 325 64.3
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.2e-116 422.9 323 63.2
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.9e-116 422.5 323 63.5
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.9e-116 422.5 324 63.0
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 3.7e-116 422.2 322 63.0
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 3.7e-116 422.2 323 62.5
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 3.7e-116 422.2 317 62.8
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 4.9e-116 421.8 326 62.6
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 6.4e-116 421.4 324 62.7
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 6.4e-116 421.4 327 61.8
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 6.4e-116 421.4 326 62.6
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.4e-115 420.2 323 61.9
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.4e-115 418.3 323 62.2
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 7.0e-115 417.9 323 61.0
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.6e-114 416.8 323 61.0
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 3.5e-114 415.6 323 62.2
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 6.0e-114 414.8 326 61.7
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.0e-114 414.8 247 75.3
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 7.8e-114 414.5 328 61.0
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.3e-113 413.7 323 60.4
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.0e-113 412.5 367 55.0
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 3.9e-113 412.1 322 61.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 6.6e-113 411.4 325 60.9
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.6e-113 411.4 325 61.2
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.6e-113 411.4 325 60.9
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 3.3e-112 409.1 325 60.3
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 7.3e-112 407.9 317 60.9
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.6e-111 405.6 324 61.1
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 2.0e-109 399.8 263 70.7
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 3.4e-109 399.1 323 60.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.9e-108 396.0 320 59.7
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.9e-107 393.3 237 74.7
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.2e-107 392.5 331 58.9
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.9e-105 385.6 248 73.8
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.6e-103 380.2 320 57.2
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 7.6e-93 344.7 252 68.7
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 1.3e-92 344.0 323 52.3
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.9e-92 342.8 325 52.0
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 1.4e-91 340.5 325 53.2
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 3.6e-87 325.9 373 44.0
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.4e-83 313.9 263 60.8
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 3.2e-83 312.8 264 59.1
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 8.1e-79 298.1 281 55.2
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 6.4e-76 288.5 250 57.2
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 5.5e-67 258.8 329 40.1
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 4.6e-66 255.8 249 51.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 9.7e-56 221.5 192 53.1
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.2e-55 220.3 193 56.0
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.7e-50 203.4 140 64.3
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.5e-45 187.6 124 67.7
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 4.2e-43 179.5 128 60.9
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.5e-36 155.6 96 69.8
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-29 132.5 151 49.0
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 1.1e-22 111.7 87 59.8
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.4e-14 84.0 84 53.6
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 3.8e-12 76.6 60 61.7
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.7e-08 62.8 52 55.8
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 1.1e-06 58.5 46 58.7
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 2.4e-06 57.4 46 58.7
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 4.1e-06 56.6 92 40.2
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 7.0e-06 55.8 46 56.5


User provided reference genes

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