Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p59650 Brassica napus HOM05D006534 ORTHO05D006434 3.3e-21 104.8 82 100.0
BolC3t18227H Brassica oleracea HOM05D006534 ORTHO05D006434 3.3e-21 104.8 82 100.0
BraA06t26214Z Brassica rapa HOM05D006534 ORTHO05D006434 1.0e-17 93.2 82 90.2
BcaNung05866 Brassica carinata HOM05D006534 ORTHO05D006434 2.5e-16 88.6 83 89.2
Sp2g29050 Schrenkiella parvula HOM05D006534 ORTHO05D006434 4.2e-16 87.8 84 89.3
AT5G67600 Arabidopsis thaliana HOM05D006534 ORTHO05D006434 3.5e-15 84.7 83 86.7
Carub.0008s2687 Capsella rubella HOM05D006534 ORTHO05D006434 3.5e-15 84.7 83 86.7
BcaC03g18364 Brassica carinata HOM05D006534 ORTHO05D006434 1.8e-14 82.4 84 79.8
CARHR279990 Cardamine hirsuta HOM05D006534 ORTHO05D006434 3.0e-14 81.6 85 78.8
AL8G43700 Arabidopsis lyrata HOM05D006534 ORTHO05D006434 6.7e-14 80.5 83 81.9
BcaNung05864 Brassica carinata HOM05D001027 ORTHO05D000844 1.6e-12 75.9 35 100.0
THA.LOC104821207 Tarenaya hassleriana HOM05D006534 ORTHO05D006434 5.3e-11 70.9 83 81.9
Ca_22100_v3 Cicer arietinum L. HOM05D006534 ORTHO05D006434 2.6e-10 68.6 79 74.7
A02p44130 Brassica napus HOM05D006534 ORTHO05D006434 3.4e-10 68.2 84 78.6
C02p64390 Brassica napus HOM05D006534 ORTHO05D006434 3.4e-10 68.2 84 78.6
BolC2t12503H Brassica oleracea HOM05D006534 ORTHO05D006434 3.4e-10 68.2 84 78.6
BraA02t09336Z Brassica rapa HOM05D006534 ORTHO05D006434 3.4e-10 68.2 84 78.6
Aa31LG1G16150 Aethionema arabicum HOM05D006534 ORTHO05D006434 1.7e-09 65.9 97 52.6
Glyma.17G160200 Glycine max HOM05D006534 ORTHO05D006434 3.8e-09 64.7 81 60.5
Sc08g0004430 Simmondsia chinensis HOM05D006534 ORTHO05D006434 3.8e-09 64.7 88 72.7
arahy.Tifrunner.gnm1.ann1.VT3BTZ Arachis hypogaea HOM05D006534 ORTHO05D006434 6.5e-09 63.9 83 73.5
CDE04G3098 Ceratophyllum demersum HOM05D006534 ORTHO05D006434 3.2e-08 61.6 82 78.0
Cfa004139 Carpinus fangiana HOM05D006534 ORTHO05D006434 1.2e-07 59.7 81 60.5
Ciclev10026875m.g Citrus clementina HOM05D006534 ORTHO05D006434 1.2e-07 59.7 82 61.0
Thecc.02G118300 Theobroma cacao HOM05D006534 ORTHO05D006434 1.6e-07 59.3 86 77.9
HPP92_006071 Vanilla planifolia HOM05D006534 ORTHO05D006434 1.6e-07 59.3 85 77.6
Lalb_Chr16g0389271 Lupinus albus HOM05D006534 ORTHO05D006434 2.7e-07 58.5 79 62.0
Psat4g081440 Pisum sativum HOM05D006534 ORTHO05D006434 4.6e-07 57.8 81 59.3
Potri.009G086900 Populus trichocarpa HOM05D006534 ORTHO05D006434 4.6e-07 57.8 94 67.0
GSVIVG01002630001 Vitis vinifera HOM05D006534 ORTHO05D006434 4.6e-07 57.8 79 68.4
TWI14G1419 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 6.1e-07 57.4 87 75.9
Manes.13G110700 Manihot esculenta HOM05D006534 ORTHO05D006434 7.9e-07 57.0 81 77.8
Dinv42239 Davidia involucrata HOM05D006534 ORTHO05D006434 1.0e-06 56.6 88 64.8
CANSAT01G0131 Cannabis sativa HOM05D006534 ORTHO05D006434 1.3e-06 56.2 90 72.2
CDE06G1753 Ceratophyllum demersum HOM05D006534 ORTHO05D006434 1.8e-06 55.8 92 70.7
ECA236G3390 Erigeron canadensis HOM05D006534 ORTHO05D006434 1.8e-06 55.8 36 77.8
Lj5g0022695 Lotus japonicus HOM05D006534 ORTHO05D006434 2.3e-06 55.5 90 63.3
Glyma.11G002000 Glycine max HOM05D006534 ORTHO05D006434 3.9e-06 54.7 101 59.4
Sed0014956 Sechium edule HOM05D006534 ORTHO05D006434 3.9e-06 54.7 90 65.6
SMO163G0020 Selaginella moellendorffii HOM05D006534 ORTHO05D006434 3.9e-06 54.7 32 71.9
Aqoxy5G01709 Aquilegia oxysepala HOM05D006534 ORTHO05D006434 5.1e-06 54.3 92 63.0
TPR.G21131 Trifolium pratense HOM05D006534 ORTHO05D006434 5.1e-06 54.3 96 59.4
CDE07G0925 Ceratophyllum demersum HOM05D006534 ORTHO05D006434 8.7e-06 53.5 35 71.4


User provided reference genes

Program Settings