Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02923 Brassica carinata HOM05D016592 ORTHO05D016087 1.7e-41 172.2 84 100.0
C03p58340 Brassica napus HOM05D016592 ORTHO05D016087 1.7e-41 172.2 84 100.0
C04p24050 Brassica napus HOM05D016592 ORTHO05D016087 6.8e-38 160.2 83 95.2
BcaC01g02822 Brassica carinata HOM05D016592 ORTHO05D016087 8.9e-38 159.8 84 95.2
A09p42120 Brassica napus HOM05D016592 ORTHO05D016087 3.4e-37 157.9 83 94.0
BraA09t39698Z Brassica rapa HOM05D016592 ORTHO05D016087 3.4e-37 157.9 83 94.0
BolC4t23900H Brassica oleracea HOM05D016592 ORTHO05D016087 5.7e-37 157.1 83 94.0
BolC4t26818H Brassica oleracea HOM05D016592 ORTHO05D016087 3.7e-36 154.5 85 92.9
C01p42100 Brassica napus HOM05D003434 ORTHO05D016087 5.8e-21 104.0 83 68.7
Sp4g08740 Schrenkiella parvula HOM05D000493 ORTHO05D001638 2.1e-10 68.9 50 76.0
Thhalv10022503m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 3.9e-09 64.7 124 39.5
AL4G19940 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 7.3e-08 60.5 50 62.0
AT2G26760 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 7.3e-08 60.5 50 62.0
Carub.0004s0717 Capsella rubella HOM05D000493 ORTHO05D001638 2.1e-07 58.9 53 56.6
Gohir.A09G109200 Gossypium hirsutum HOM05D000493 ORTHO05D001638 2.1e-07 58.9 73 46.6
Gohir.D09G105800 Gossypium hirsutum HOM05D000493 ORTHO05D001638 2.1e-07 58.9 73 46.6
Gorai.006G123200 Gossypium raimondii HOM05D000493 ORTHO05D001638 1.1e-06 56.6 68 45.6
SalBow1G7844 Salvia bowleyana HOM05D000493 ORTHO05D001638 6.9e-06 53.9 79 39.2
PGR119G1423 Punica granatum HOM05D000493 ORTHO05D001638 9.0e-06 53.5 61 45.9


User provided reference genes

Program Settings