Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p57200 Brassica napus HOM05D009862 ORTHO05D039244 3.5e-28 127.5 60 100.0
BcaC01g03013 Brassica carinata HOM05D003553 ORTHO05D039244 2.5e-10 68.2 41 82.9
BcaB01g02747 Brassica carinata HOM05D003553 ORTHO05D039541 2.3e-08 61.6 43 69.8
BcaC08g46898 Brassica carinata HOM05D003553 ORTHO05D005072 1.7e-06 55.5 40 67.5
C06p48750 Brassica napus HOM05D003553 ORTHO05D005072 1.7e-06 55.5 40 67.5
AL2G34600 Arabidopsis lyrata HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 67.5
AT1G74710 Arabidopsis thaliana HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 67.5
BcaB02g06963 Brassica carinata HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
BcaC03g15524 Brassica carinata HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
A02p19540 Brassica napus HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
A07p29260 Brassica napus HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
C02p32080 Brassica napus HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
C06p33160 Brassica napus HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
BolC2t09243H Brassica oleracea HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
BolC6t38431H Brassica oleracea HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
BraA02t06991Z Brassica rapa HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
BraA07t30565Z Brassica rapa HOM05D003553 ORTHO05D005072 2.2e-06 55.1 40 65.0
Thhalv10018346m.g Eutrema salsugineum HOM05D003553 ORTHO05D005072 2.9e-06 54.7 40 65.0
BolC6t39911H Brassica oleracea HOM05D003553 ORTHO05D005072 4.9e-06 53.9 40 67.5
BraA07t31582Z Brassica rapa HOM05D003553 ORTHO05D005072 4.9e-06 53.9 40 67.5
BcaC01g00346 Brassica carinata HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
BcaC05g25790 Brassica carinata HOM05D003553 ORTHO05D005072 6.4e-06 53.5 58 51.7
A05p05690 Brassica napus HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
A05p12350 Brassica napus HOM05D009862 ORTHO05D016026 6.4e-06 53.5 29 75.9
A05p19230 Brassica napus HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
A06p15100 Brassica napus HOM05D003553 ORTHO05D005072 6.4e-06 53.5 40 67.5
A09p17710 Brassica napus HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
C03p78740 Brassica napus HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
C09p18240 Brassica napus HOM05D009862 ORTHO05D033657 6.4e-06 53.5 29 75.9
C09p21100 Brassica napus HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
BolC2t11493H Brassica oleracea HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
BolC3t21354H Brassica oleracea HOM05D009862 ORTHO05D033657 6.4e-06 53.5 29 75.9
BraA05t20174Z Brassica rapa HOM05D009862 ORTHO05D018588 6.4e-06 53.5 29 75.9
BraA06t24624Z Brassica rapa HOM05D003553 ORTHO05D005072 6.4e-06 53.5 40 67.5
BraA07t28641Z Brassica rapa HOM05D009862 ORTHO05D033657 6.4e-06 53.5 29 75.9
Aa31LG4G4940 Aethionema arabicum HOM05D003553 ORTHO05D005072 8.4e-06 53.1 40 65.0


User provided reference genes

Program Settings