Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p57080 Brassica napus HOM05D008134 ORTHO05D012640 1.3e-81 306.6 179 100.0
C04p50590 Brassica napus HOM05D008134 ORTHO05D012640 2.2e-54 216.1 153 89.5
BolC6t36686H Brassica oleracea HOM05D008134 ORTHO05D012640 1.9e-50 203.0 127 99.2
BolC7t42129H Brassica oleracea HOM05D008134 ORTHO05D012640 9.1e-40 167.5 110 97.3
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 2.2e-38 162.9 107 98.1
C05p28440 Brassica napus HOM05D008134 ORTHO05D012640 7.2e-37 157.9 110 94.5
BolC7t40874H Brassica oleracea HOM05D008134 ORTHO05D012640 1.7e-30 136.7 161 62.1
Sp2g06250 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.7e-30 136.7 166 47.6
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 8.5e-30 134.4 138 71.7
BcaC08g43113 Brassica carinata HOM05D008134 ORTHO05D012640 3.6e-28 129.0 100 89.0
C06p03860 Brassica napus HOM05D008134 ORTHO05D012640 3.6e-28 129.0 100 89.0
SpUn0005_0100 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.4e-24 116.3 161 42.9
SpUn0901_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.3e-22 110.5 93 61.3
BcaB08g35215 Brassica carinata HOM05D008134 ORTHO05D012640 2.2e-22 109.8 91 63.7
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.1e-21 107.5 176 39.8
BcaC07g37906 Brassica carinata HOM05D008134 ORTHO05D012640 1.2e-20 104.0 115 55.7
Sp4g06240 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.7e-20 102.1 174 40.2
SpUn0003_0150 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.4e-19 100.5 113 51.3
Sp1g30250 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.3e-19 99.8 171 40.4
SpUn0894_0010 Schrenkiella parvula HOM05D008134 ORTHO05D012640 2.3e-19 99.8 115 47.8
Sp1g30730 Schrenkiella parvula HOM05D006786 ORTHO05D006374 1.2e-18 97.4 161 36.6
Sp1g30650 Schrenkiella parvula HOM05D008134 ORTHO05D006374 7.5e-18 94.7 115 47.8
Sp5g20400 Schrenkiella parvula HOM05D008134 ORTHO05D006374 7.5e-18 94.7 73 65.8
Sp1g31720 Schrenkiella parvula HOM05D008134 ORTHO05D012640 3.7e-17 92.4 69 68.1
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 1.4e-16 90.5 45 100.0
Sp1g32050 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.1e-16 89.0 111 47.7
Sp1g31890 Schrenkiella parvula HOM05D008134 ORTHO05D006374 5.4e-16 88.6 187 34.2
BcaC04g19806 Brassica carinata HOM05D008134 ORTHO05D012640 9.1e-16 87.8 68 80.9
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 1.6e-15 87.0 45 97.8
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 1.6e-15 87.0 45 97.8
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 4.5e-15 85.5 45 95.6
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 1.7e-14 83.6 45 95.6
Sp6g10160 Schrenkiella parvula HOM05D008134 ORTHO05D006374 8.5e-14 81.3 122 42.6
C07p16350 Brassica napus HOM05D008134 ORTHO05D006374 2.5e-13 79.7 42 95.2
BolC3t17986H Brassica oleracea HOM05D008134 ORTHO05D012640 2.5e-13 79.7 39 100.0
BraA01t03624Z Brassica rapa HOM05D007948 ORTHO05D006374 5.5e-13 78.6 113 41.6
C04p38240 Brassica napus HOM05D008134 ORTHO05D012640 2.7e-12 76.3 39 97.4
BolC1t04559H Brassica oleracea HOM05D008134 ORTHO05D012640 2.7e-12 76.3 39 97.4
BolC3t18808H Brassica oleracea HOM05D008134 ORTHO05D012640 2.7e-12 76.3 39 97.4
BolC5t31569H Brassica oleracea HOM05D008134 ORTHO05D012640 2.7e-12 76.3 39 97.4
Sp2g05060 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.7e-12 76.3 112 36.6
Sp4g09500 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.0e-11 74.3 120 38.3
SpUn0396_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.0e-11 74.3 112 35.7
BcaC08g44424 Brassica carinata HOM05D008134 ORTHO05D039306 1.4e-11 73.9 41 90.2
C06p33680 Brassica napus HOM05D008134 ORTHO05D039306 1.4e-11 73.9 41 90.2
BcaC03g16243 Brassica carinata HOM05D007948 ORTHO05D006374 3.0e-11 72.8 120 40.0
BolC2t08048H Brassica oleracea HOM05D008134 ORTHO05D012640 3.0e-11 72.8 39 94.9
BolC2t08060H Brassica oleracea HOM05D008134 ORTHO05D012640 3.0e-11 72.8 39 94.9
C02p36180 Brassica napus HOM05D008134 ORTHO05D012640 5.2e-11 72.0 37 97.3
C03p26840 Brassica napus HOM05D008134 ORTHO05D039265 8.8e-11 71.2 41 87.8
Sp1g30270 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.5e-10 70.5 64 62.5
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.0e-10 70.1 112 34.8
BcaC09g51086 Brassica carinata HOM05D008134 ORTHO05D039265 2.6e-10 69.7 41 85.4
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 3.4e-10 69.3 107 39.3
Sp5g18200 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.3e-09 67.4 111 34.2
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 8.3e-09 64.7 125 36.8
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 1.1e-08 64.3 100 39.0
SpUn0001_0790 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.1e-08 64.3 98 35.7
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.4e-08 63.9 107 34.6
BolC4t24390H Brassica oleracea HOM05D007948 ORTHO05D006374 3.1e-08 62.8 112 38.4
SpUn0011_0060 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.1e-08 62.8 111 38.7
SpUn0023_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.1e-08 62.8 111 38.7
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 4.1e-08 62.4 94 39.4
Sp4g09020 Schrenkiella parvula HOM05D008420 ORTHO05D009795 4.1e-08 62.4 93 41.9
BcaC02g08352 Brassica carinata HOM05D007948 ORTHO05D006374 7.0e-08 61.6 112 35.7
BcaC03g14749 Brassica carinata HOM05D007948 ORTHO05D006374 7.0e-08 61.6 110 40.9
Sp7g08570 Schrenkiella parvula HOM05D008134 ORTHO05D006374 9.1e-08 61.2 92 37.0
SpUn0135_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 9.1e-08 61.2 92 37.0
BcaC06g36333 Brassica carinata HOM05D007948 ORTHO05D006374 2.0e-07 60.1 111 34.2
BcaC03g16472 Brassica carinata HOM05D007948 ORTHO05D006374 2.7e-07 59.7 112 36.6
BolC3t19236H Brassica oleracea HOM05D009982 ORTHO05D006374 2.7e-07 59.7 107 33.6
THA.LOC104798935 Tarenaya hassleriana HOM05D013951 ORTHO05D011833 2.7e-07 59.7 110 30.0
THA.LOC104805039 Tarenaya hassleriana HOM05D020332 ORTHO05D011833 3.5e-07 59.3 87 41.4
THA.LOC104809649 Tarenaya hassleriana HOM05D020332 ORTHO05D011833 3.5e-07 59.3 111 33.3
THA.LOC104825590 Tarenaya hassleriana HOM05D020332 ORTHO05D011833 3.5e-07 59.3 111 33.3
SpUn0001_0130 Schrenkiella parvula HOM05D008134 ORTHO05D006374 5.9e-07 58.5 80 41.2
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 7.7e-07 58.2 112 36.6
BolC2t10322H Brassica oleracea HOM05D007948 ORTHO05D006374 7.7e-07 58.2 112 35.7
THA.LOC104814055 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 7.7e-07 58.2 113 29.2
BcaC01g02006 Brassica carinata HOM05D007948 ORTHO05D006374 1.0e-06 57.8 112 36.6
BcaC02g10756 Brassica carinata HOM05D007948 ORTHO05D006374 1.3e-06 57.4 98 34.7
BolC7t43939H Brassica oleracea HOM05D009982 ORTHO05D006374 1.3e-06 57.4 107 32.7
THA.LOC109116536 Tarenaya hassleriana HOM05D013951 ORTHO05D011833 1.7e-06 57.0 110 29.1
THA.LOC109117165 Tarenaya hassleriana HOM05D013951 ORTHO05D000001 1.7e-06 57.0 118 32.2
Sp2g08160 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.3e-06 56.6 119 35.3
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 2.9e-06 56.2 107 32.7
BcaB04g17045 Brassica carinata HOM05D007948 ORTHO05D006374 3.8e-06 55.8 113 33.6
THA.LOC104822874 Tarenaya hassleriana HOM05D020332 ORTHO05D011833 3.8e-06 55.8 96 36.5
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 5.0e-06 55.5 113 28.3
BolC9t54058H Brassica oleracea HOM05D009982 ORTHO05D006374 6.6e-06 55.1 107 31.8
BolC6t39110H Brassica oleracea HOM05D006180 ORTHO05D008836 8.6e-06 54.7 87 33.3


User provided reference genes

Program Settings