Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03062 Brassica carinata HOM05D014923 ORTHO05D039909 6.8e-19 96.7 62 100.0
C03p56490 Brassica napus HOM05D014923 ORTHO05D039909 6.8e-19 96.7 62 100.0
A03p45510 Brassica napus HOM05D014923 ORTHO05D018556 1.7e-14 82.0 58 74.1
BcaC02g11709 Brassica carinata HOM05D014923 ORTHO05D018556 9.5e-13 76.3 58 84.5
C04p12110 Brassica napus HOM05D014923 ORTHO05D018556 9.5e-13 76.3 58 84.5
BcaC04g19475 Brassica carinata HOM05D014923 ORTHO05D018556 3.6e-12 74.3 58 84.5
BolC2t10056H Brassica oleracea HOM05D014923 ORTHO05D018556 1.1e-11 72.8 58 84.5
A08p12360 Brassica napus HOM05D001624 ORTHO05D001530 2.3e-11 71.6 53 92.5
C02p40280 Brassica napus HOM05D014923 ORTHO05D018556 2.3e-11 71.6 58 82.8
BolC8t48345H Brassica oleracea HOM05D001624 ORTHO05D001530 2.3e-11 71.6 53 90.6
BraA02t07525Z Brassica rapa HOM05D014923 ORTHO05D018556 5.2e-11 70.5 58 65.5
BcaB04g18369 Brassica carinata HOM05D001624 ORTHO05D001530 8.9e-11 69.7 53 86.8
BraA08t33219Z Brassica rapa HOM05D001624 ORTHO05D001530 8.9e-11 69.7 53 90.6
BcaC07g37963 Brassica carinata HOM05D001624 ORTHO05D001530 1.2e-10 69.3 53 88.7
A02p25380 Brassica napus HOM05D014923 ORTHO05D018556 3.4e-10 67.8 58 63.8
AL7G38940 Arabidopsis lyrata HOM05D001624 ORTHO05D001530 5.8e-10 67.0 61 78.7
Sp7g14680 Schrenkiella parvula HOM05D001624 ORTHO05D001530 3.7e-09 64.3 68 64.7
BcaC06g32993 Brassica carinata HOM05D001624 ORTHO05D001530 1.4e-08 62.4 59 79.7
CARHR222540 Cardamine hirsuta HOM05D001624 ORTHO05D001530 1.4e-08 62.4 59 69.5
BolC7t45296H Brassica oleracea HOM05D001624 ORTHO05D001530 3.2e-08 61.2 59 64.4
Carub.0007s2538 Capsella rubella HOM05D001624 ORTHO05D001530 3.2e-08 61.2 67 71.6
Thhalv10026169m.g Eutrema salsugineum HOM05D001624 ORTHO05D001530 1.2e-07 59.3 68 52.9
BcaNung00216 Brassica carinata HOM05D001624 ORTHO05D001530 2.7e-07 58.2 66 56.1
A01p21390 Brassica napus HOM05D001624 ORTHO05D001530 6.0e-07 57.0 68 70.6
BraA01t02044Z Brassica rapa HOM05D001624 ORTHO05D001530 6.0e-07 57.0 68 70.6
BcaC06g33459 Brassica carinata HOM05D001624 ORTHO05D001530 7.8e-07 56.6 59 78.0
C07p47710 Brassica napus HOM05D001624 ORTHO05D001530 7.8e-07 56.6 59 78.0
A03p49640 Brassica napus HOM05D001624 ORTHO05D001530 1.3e-06 55.8 61 77.0
BraA03t14063Z Brassica rapa HOM05D001624 ORTHO05D001530 1.3e-06 55.8 61 77.0
BcaC09g50316 Brassica carinata HOM05D001624 ORTHO05D001530 2.3e-06 55.1 54 81.5
BolC1t02614H Brassica oleracea HOM05D001624 ORTHO05D001530 2.3e-06 55.1 54 81.5
C01p26730 Brassica napus HOM05D001624 ORTHO05D001530 3.0e-06 54.7 54 81.5


User provided reference genes

Program Settings