Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p56400 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-135 485.7 243 100.0
BolC3t17929H Brassica oleracea HOM05D000051 ORTHO05D000015 7.8e-127 457.2 270 88.1
A03p45440 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-56 222.2 141 83.7
AL8G28560 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.8e-41 172.6 272 41.5
AL8G28350 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.2e-40 168.3 271 39.5
AT1G51370 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.7e-37 158.7 254 43.3
BcaB08g34593 Brassica carinata HOM05D000051 ORTHO05D000015 7.5e-37 158.3 89 86.5
Carub.0008s1382 Capsella rubella HOM05D000051 ORTHO05D000015 7.5e-37 158.3 288 38.2
AL8G28510 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.0e-35 151.8 267 39.7
Carub.0008s1379 Capsella rubella HOM05D000051 ORTHO05D000015 2.0e-34 150.2 272 40.1
AL8G28540 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.5e-34 149.4 274 40.1
AL8G28470 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.9e-34 148.7 269 36.4
AL8G28520 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.7e-34 148.3 270 37.0
AL8G28530 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.0e-33 147.9 268 35.8
Carub.0008s1392 Capsella rubella HOM05D000051 ORTHO05D000015 8.5e-33 144.8 274 37.6
Carub.0008s1394 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-32 144.4 277 39.0
Carub.0008s1389 Capsella rubella HOM05D000051 ORTHO05D000015 3.2e-32 142.9 271 35.8
C03p17550 Brassica napus HOM05D000051 ORTHO05D000015 7.2e-32 141.7 271 38.0
BolC3t14169H Brassica oleracea HOM05D000051 ORTHO05D000015 7.2e-32 141.7 271 38.0
A03p15060 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-31 140.6 271 39.1
BraA03t10800Z Brassica rapa HOM05D000051 ORTHO05D000015 1.6e-31 140.6 271 39.1
C03p17560 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-31 139.4 271 39.1
BolC3t14170H Brassica oleracea HOM05D000051 ORTHO05D000015 3.6e-31 139.4 271 39.1
Carub.0008s1259 Capsella rubella HOM05D000051 ORTHO05D000015 6.8e-30 135.2 272 35.7
Carub.0008s1391 Capsella rubella HOM05D000051 ORTHO05D000015 8.8e-30 134.8 276 38.4
Sp6g15740 Schrenkiella parvula HOM05D000051 ORTHO05D000015 8.8e-30 134.8 271 37.6
AT5G53840 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.2e-29 134.4 277 36.8
A03p15050 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-29 134.4 270 37.0
BraA03t10799Z Brassica rapa HOM05D000051 ORTHO05D000015 1.2e-29 134.4 270 37.0
Carub.0008s1390 Capsella rubella HOM05D000051 ORTHO05D000015 1.2e-29 134.4 272 36.8
Carub.0008s1413 Capsella rubella HOM05D000051 ORTHO05D000015 4.4e-29 132.5 282 35.5
CARHR266790 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.1e-27 126.3 274 35.0
Carub.0008s1396 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-26 124.0 273 35.2
CARHR257990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-26 124.0 226 35.8
AL8G28900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.5e-26 122.5 281 35.9
Thhalv10023168m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.0e-25 119.0 127 52.0
CARHR284840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.2e-24 115.2 264 30.7
CARHR253160 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.0e-23 111.7 181 43.6
Carub.0008s1395 Capsella rubella HOM05D000051 ORTHO05D000015 1.8e-22 110.5 183 42.6
C09p43520 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-22 109.4 273 33.0
Thhalv10002518m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-17 92.0 288 33.0
AT5G22730 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.9e-16 90.5 290 30.0
Thhalv10015239m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.8e-15 86.7 258 38.8
Carub.0006s2044 Capsella rubella HOM05D000051 ORTHO05D000015 3.6e-15 86.3 292 30.5
BcaB01g04701 Brassica carinata HOM05D000051 ORTHO05D000015 4.7e-15 85.9 295 28.8
AL6G33720 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.0e-14 82.8 291 30.6
BcaB01g04246 Brassica carinata HOM05D000051 ORTHO05D000015 1.5e-13 80.9 249 32.5
BcaC01g06573 Brassica carinata HOM05D000051 ORTHO05D000015 2.6e-13 80.1 295 28.1
C03p12490 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-13 80.1 295 28.1
BraA03t10395Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-13 79.3 293 27.6
A03p10850 Brassica napus HOM05D000051 ORTHO05D000015 9.8e-13 78.2 296 27.4
BolC9t57236H Brassica oleracea HOM05D000051 ORTHO05D000015 1.3e-12 77.8 279 30.1
Sp5g16420 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.3e-12 77.8 287 32.4
AT1G66310 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.3e-12 75.1 276 32.6
C09p43550 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-11 74.3 268 27.6
Carub.0002s1228 Capsella rubella HOM05D000051 ORTHO05D000015 1.9e-11 73.9 286 30.1
AT1G78760 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.4e-11 73.6 281 29.2
AT5G22700 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.4e-11 73.6 221 31.2
Thhalv10015873m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.4e-11 73.6 288 30.6
AT1G66320 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.2e-11 73.2 276 28.3
Sp1g15070 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.2e-11 73.2 288 29.2
Carub.0002s1230 Capsella rubella HOM05D000051 ORTHO05D000015 9.2e-11 71.6 286 29.7
Carub.0008s1386 Capsella rubella HOM05D000051 ORTHO05D000015 1.2e-10 71.2 163 31.9
Carub.0006s2042 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-10 70.9 216 31.9
AL6G33690 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.0e-10 70.5 284 28.2
AT1G66640 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.7e-10 70.1 272 29.4
A10p11070 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-10 70.1 282 27.0
C05p15230 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-10 70.1 236 30.5
C09p43510 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-10 70.1 275 30.2
Thhalv10015300m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.7e-10 70.1 282 29.4
Thhalv10013520m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.5e-10 69.7 283 29.7
Carub.0008s1393 Capsella rubella HOM05D000051 ORTHO05D000015 4.6e-10 69.3 278 27.7
CARHR190910 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.6e-10 69.3 289 27.3
Carub.0007s2845 Capsella rubella HOM05D000051 ORTHO05D000015 6.0e-10 68.9 278 29.9
CARHR190860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.0e-10 68.9 293 28.0
CARHR189230 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.8e-10 68.6 270 28.9
Thhalv10015350m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.8e-10 68.6 277 29.6
BcaB05g22062 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-09 67.8 301 27.9
Thhalv10015662m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.3e-09 67.8 280 27.9
AL6G33710 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-09 67.4 212 30.2
AL6G30120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.0e-09 66.6 284 29.2
AT4G13985 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.0e-09 66.6 279 29.7
C03p17990 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-09 66.6 248 28.2
Sp2g09770 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.0e-09 66.6 219 32.0
BraA03t10393Z Brassica rapa HOM05D000051 ORTHO05D000015 3.9e-09 66.2 279 28.3
BraA02t05681Z Brassica rapa HOM05D000051 ORTHO05D000015 5.0e-09 65.9 285 26.7
BraA03t10391Z Brassica rapa HOM05D000051 ORTHO05D000015 5.0e-09 65.9 276 28.3
Carub.0002s1233 Capsella rubella HOM05D000051 ORTHO05D000015 5.0e-09 65.9 283 28.3
Thhalv10001812m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.0e-09 65.9 284 27.8
Aa31LG5G24210 Aethionema arabicum HOM05D000051 ORTHO05D000015 6.6e-09 65.5 289 29.4
Thhalv10015428m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-09 65.5 245 28.6
CARHR201930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.6e-09 65.1 275 30.5
BcaB05g22718 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-08 64.7 278 28.1
C05p41970 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 64.7 273 28.2
BolC3t13716H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-08 64.7 282 27.7
BolC5t32931H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-08 64.7 273 28.2
AT5G22600 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.5e-08 64.3 284 26.8
A02p10940 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-08 64.3 294 28.2
A07p43970 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-08 64.3 281 29.9
Carub.0008s1384 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-08 64.3 289 28.0
AL2G39130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.9e-08 63.9 218 32.6
Sp6g25610 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.9e-08 63.9 283 27.2
Aa31sc2022G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.5e-08 63.5 275 29.5
AT1G69630 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.5e-08 63.5 283 29.7
BcaC06g31579 Brassica carinata HOM05D000051 ORTHO05D000015 2.5e-08 63.5 203 31.5
CARHR072270 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.5e-08 63.5 270 33.0
Thhalv10015301m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.3e-08 63.2 281 29.5
AL1G29120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.3e-08 62.8 287 27.2
AT1G16930 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.3e-08 62.8 287 27.5
AT5G22670 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.3e-08 62.8 283 27.6
A03p15410 Brassica napus HOM05D000051 ORTHO05D000015 4.3e-08 62.8 250 28.0
C02p18150 Brassica napus HOM05D000051 ORTHO05D000015 4.3e-08 62.8 294 27.9
BraA02t06159Z Brassica rapa HOM05D000051 ORTHO05D000015 4.3e-08 62.8 294 27.9
CARHR190920 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.3e-08 62.8 287 26.8
CARHR188550 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.6e-08 62.4 236 28.4
AT1G78730 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.3e-08 62.0 277 29.6
BcaC03g14400 Brassica carinata HOM05D000051 ORTHO05D000015 7.3e-08 62.0 294 27.9
BolC2t07945H Brassica oleracea HOM05D000051 ORTHO05D000015 7.3e-08 62.0 294 27.9
A05p27190 Brassica napus HOM05D000051 ORTHO05D000015 9.5e-08 61.6 273 27.8
C03p12470 Brassica napus HOM05D000051 ORTHO05D000015 9.5e-08 61.6 215 31.6
BraA02t05668Z Brassica rapa HOM05D000051 ORTHO05D000015 9.5e-08 61.6 292 27.1
BraA05t21608Z Brassica rapa HOM05D000051 ORTHO05D000015 9.5e-08 61.6 273 27.8
CARHR072300 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-07 61.2 268 29.9
AT1G78750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.1e-07 60.5 283 29.7
Thhalv10015993m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.1e-07 60.5 272 29.4
BcaB05g22705 Brassica carinata HOM05D000051 ORTHO05D000015 3.6e-07 59.7 189 31.2
BraA03t10831Z Brassica rapa HOM05D000051 ORTHO05D000015 4.7e-07 59.3 268 26.5
Carub.0002s1227 Capsella rubella HOM05D000051 ORTHO05D000015 4.7e-07 59.3 279 28.0
Thhalv10018570m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.7e-07 59.3 269 27.1
BcaB01g04216 Brassica carinata HOM05D000051 ORTHO05D000015 6.2e-07 58.9 255 27.5
BNapus_Darmor_BZH_scaffold_38p00550 Brassica napus HOM05D000051 ORTHO05D000015 6.2e-07 58.9 291 26.8
CARHR284830 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.2e-07 58.9 287 26.5
CARHR266730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.0e-07 58.5 112 33.9
AT5G18780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.1e-06 58.2 290 27.6
BolC3t14205H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-06 58.2 240 27.9
AT1G66290 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.4e-06 57.8 278 26.6
BolC3t13877H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-06 57.4 211 31.8
Carub.0008s1378 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-06 57.0 276 28.6
Sp6g15230 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.3e-06 57.0 278 27.0
Thhalv10007642m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.0e-06 56.2 289 27.0
A06p46820 Brassica napus HOM05D000051 ORTHO05D000015 5.2e-06 55.8 276 25.7
AL6G30130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.8e-06 55.5 287 27.9


User provided reference genes

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