Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p56180 Brassica napus HOM05D000589 ORTHO05D027472 7.2e-107 390.6 197 100.0
BcaC09g50788 Brassica carinata HOM05D000589 ORTHO05D027472 2.5e-38 162.9 96 88.5
BolC9t58870H Brassica oleracea HOM05D000589 ORTHO05D027472 2.7e-37 159.5 93 88.2
BcaC06g34168 Brassica carinata HOM05D000589 ORTHO05D027472 9.4e-30 134.4 101 75.2
A03p45030 Brassica napus HOM05D000083 ORTHO05D001244 2.2e-10 70.1 46 78.3
C03p55910 Brassica napus HOM05D000083 ORTHO05D001244 2.2e-10 70.1 46 78.3
BolC3t17871H Brassica oleracea HOM05D000083 ORTHO05D001244 2.2e-10 70.1 46 78.3
BraA03t13639Z Brassica rapa HOM05D000083 ORTHO05D001244 2.2e-10 70.1 46 78.3
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 2.0e-08 63.5 48 68.8
BcaC01g03117 Brassica carinata HOM05D000083 ORTHO05D001244 7.7e-08 61.6 61 57.4
BcaB08g35979 Brassica carinata HOM05D001024 ORTHO05D000878 6.5e-07 58.5 98 41.8
BcaC04g20122 Brassica carinata HOM05D001024 ORTHO05D000878 6.5e-07 58.5 98 41.8
C09p47290 Brassica napus HOM05D001024 ORTHO05D000878 6.5e-07 58.5 98 41.8
BolC9t57586H Brassica oleracea HOM05D001024 ORTHO05D000878 6.5e-07 58.5 98 41.8
A10p13360 Brassica napus HOM05D001024 ORTHO05D000878 8.5e-07 58.2 98 41.8
BraA10t43437Z Brassica rapa HOM05D001024 ORTHO05D000878 8.5e-07 58.2 98 41.8
AL8G31770 Arabidopsis lyrata HOM05D001024 ORTHO05D000878 1.5e-06 57.4 98 40.8
AT5G56140 Arabidopsis thaliana HOM05D001024 ORTHO05D000878 1.5e-06 57.4 98 40.8
CARHR269510 Cardamine hirsuta HOM05D001024 ORTHO05D000878 1.5e-06 57.4 98 40.8
Aa31LG3G12050 Aethionema arabicum HOM05D001024 ORTHO05D000878 2.5e-06 56.6 98 40.8
BcaC09g50713 Brassica carinata HOM05D001024 ORTHO05D000878 2.5e-06 56.6 95 42.1
BcaNung02415 Brassica carinata HOM05D001024 ORTHO05D000878 2.5e-06 56.6 95 42.1
A01p17730 Brassica napus HOM05D001024 ORTHO05D000878 2.5e-06 56.6 95 42.1
C01p22400 Brassica napus HOM05D001024 ORTHO05D000878 2.5e-06 56.6 95 42.1
BolC1t02171H Brassica oleracea HOM05D001024 ORTHO05D000878 2.5e-06 56.6 95 42.1
BraA01t01728Z Brassica rapa HOM05D001024 ORTHO05D000878 2.5e-06 56.6 95 42.1
Thhalv10014150m.g Eutrema salsugineum HOM05D001024 ORTHO05D000878 2.5e-06 56.6 98 40.8
Sp6g17990 Schrenkiella parvula HOM05D001024 ORTHO05D000878 2.5e-06 56.6 98 40.8
Aa31LG5G11830 Aethionema arabicum HOM05D001024 ORTHO05D000878 4.2e-06 55.8 95 41.1
Sp7g24420 Schrenkiella parvula HOM05D001024 ORTHO05D000878 4.2e-06 55.8 95 41.1
Haze_09908 Corylus avellana HOM05D001024 ORTHO05D000878 5.5e-06 55.5 115 34.8
C09p50860 Brassica napus HOM05D005251 ORTHO05D006680 7.2e-06 55.1 33 75.8
BolC9t57946H Brassica oleracea HOM05D005251 ORTHO05D006680 9.4e-06 54.7 33 75.8
HanXRQChr11g0334511 Helianthus annuus HOM05D001024 ORTHO05D000878 9.4e-06 54.7 102 37.3


User provided reference genes

Program Settings