Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 2.0e-241 838.6 401 100.0
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 8.9e-221 770.0 401 92.8
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 2.6e-220 768.5 401 92.5
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 7.1e-210 733.8 408 88.5
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.3e-208 729.6 410 88.0
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 5.1e-200 701.0 413 84.3
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.0e-187 660.2 418 76.8
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.9e-186 656.0 416 78.4
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.4e-178 629.8 407 75.9
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 2.6e-172 609.0 342 83.0
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 2.2e-171 605.9 345 83.5
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.9e-171 605.5 346 82.7
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 2.5e-170 602.4 348 83.0
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.4e-165 586.6 344 78.5
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.4e-165 585.9 353 77.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 7.0e-165 584.3 391 71.4
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.1e-165 583.9 353 77.3
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.6e-164 582.4 341 79.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.6e-164 582.4 343 78.7
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 5.9e-164 581.3 343 78.1
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 5.9e-164 581.3 343 78.7
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 5.9e-164 581.3 343 78.7
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 5.9e-164 581.3 363 76.0
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 7.7e-164 580.9 353 76.8
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 1.0e-163 580.5 403 70.7
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.3e-163 580.1 423 66.4
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.3e-163 580.1 344 77.9
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.2e-163 579.3 349 76.8
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 2.9e-163 578.9 438 66.2
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 3.8e-163 578.6 410 69.3
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 5.0e-163 578.2 369 72.9
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.1e-162 577.0 344 77.6
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.9e-162 576.2 344 77.3
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 1.9e-162 576.2 342 78.4
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.9e-162 576.2 344 76.7
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 2.5e-162 575.9 345 77.1
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 4.2e-162 575.1 398 68.6
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 4.2e-162 575.1 346 76.3
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 4.2e-162 575.1 352 75.9
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 5.5e-162 574.7 341 77.7
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 5.5e-162 574.7 353 75.4
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 7.2e-162 574.3 344 77.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 9.4e-162 573.9 398 69.6
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 9.4e-162 573.9 344 76.5
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 9.4e-162 573.9 398 69.6
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.1e-161 572.8 342 77.8
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 2.1e-161 572.8 344 77.0
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.7e-161 572.4 353 75.1
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.6e-161 572.0 392 70.2
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 4.7e-161 571.6 402 69.4
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 8.0e-161 570.9 366 74.0
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 8.0e-161 570.9 344 76.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.4e-160 570.1 341 77.4
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.8e-160 569.7 349 74.5
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.0e-160 568.9 384 71.6
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 5.2e-160 568.2 360 73.1
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 8.8e-160 567.4 344 75.0
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 8.8e-160 567.4 344 76.2
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.1e-159 567.0 366 73.5
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 1.5e-159 566.6 398 67.3
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.5e-159 566.6 422 65.9
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.6e-159 565.8 396 67.9
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 4.4e-159 565.1 341 76.8
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 4.4e-159 565.1 344 75.0
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 7.5e-159 564.3 341 76.0
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.3e-158 563.5 363 72.2
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 2.8e-158 562.4 344 75.3
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.7e-158 562.0 344 75.6
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.1e-157 560.5 344 74.7
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.4e-157 559.3 342 75.7
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 5.3e-157 558.1 342 75.4
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.0e-156 556.2 385 68.8
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 3.5e-156 555.4 349 73.1
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 5.0e-155 551.6 345 72.8
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 2.1e-153 546.2 392 66.3
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 8.0e-153 544.3 348 73.3
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.8e-152 543.1 345 71.9
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.3e-152 542.7 352 71.9
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.2e-150 536.2 348 72.7
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.4e-149 532.7 341 72.1
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.1e-149 531.9 345 72.5
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 2.0e-148 529.6 362 69.1
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.8e-144 516.5 352 69.3
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.0e-143 513.1 378 66.4
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 7.5e-143 511.1 315 73.0
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.8e-142 509.2 348 70.7
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 8.3e-142 507.7 322 71.4
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 2.9e-139 499.2 344 68.3
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 3.8e-139 498.8 344 66.3
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.2e-137 493.8 391 61.9
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.6e-137 492.3 349 63.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.4e-136 490.3 354 64.4
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.5e-135 486.9 341 66.9
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 4.9e-134 481.9 347 63.1
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 4.9e-134 481.9 318 70.4
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 4.9e-126 455.3 611 43.7
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 2.0e-124 449.9 364 59.1
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.7e-115 420.2 245 78.0
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.7e-100 369.8 292 62.7
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 2.8e-97 359.8 223 75.8
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.6e-97 359.4 307 58.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 2.4e-96 356.7 272 63.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 9.0e-88 328.2 380 42.9
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.8e-81 306.6 342 44.4
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.1e-80 304.7 343 44.6
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 5.3e-80 302.4 376 41.5
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.7e-68 263.5 162 75.9
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 7.2e-53 212.2 372 37.1
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 9.4e-53 211.8 217 48.8
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.4e-51 208.0 151 63.6
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.3e-51 207.2 185 55.7
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 9.1e-48 195.3 204 52.0
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 9.4e-45 185.3 166 57.8
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.4e-43 181.4 225 40.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.6e-26 124.0 82 67.1
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 4.7e-20 103.2 65 69.2
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.3e-14 85.1 79 49.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 2.3e-11 74.3 62 56.5
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 4.4e-10 70.1 39 71.8
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.2e-08 63.9 34 76.5
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 3.5e-07 60.5 37 62.2


User provided reference genes

Program Settings