Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p55780 Brassica napus HOM05D004469 ORTHO05D005429 7.9e-300 1033.1 558 100.0
BolC3t17859H Brassica oleracea HOM05D004469 ORTHO05D005429 2.3e-299 1031.6 558 99.8
BraA03t13626Z Brassica rapa HOM05D004469 ORTHO05D005429 7.7e-287 989.9 562 96.1
A03p44900 Brassica napus HOM05D004469 ORTHO05D005429 1.2e-284 982.6 558 95.7
BcaB08g34526 Brassica carinata HOM05D004469 ORTHO05D005429 1.4e-269 932.6 580 89.0
Sp3g26680 Schrenkiella parvula HOM05D004469 ORTHO05D005429 2.0e-247 859.0 563 85.1
Thhalv10022623m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 3.6e-236 821.6 574 80.8
AL3G45030 Arabidopsis lyrata HOM05D004469 ORTHO05D005429 2.4e-232 808.9 573 79.6
CARHR105080 Cardamine hirsuta HOM05D004469 ORTHO05D005429 3.9e-230 801.6 557 78.5
AT2G12550 Arabidopsis thaliana HOM05D004469 ORTHO05D005429 7.3e-229 797.3 565 79.1
Thhalv10001944m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 3.6e-228 795.0 574 78.6
Aa31sc54G60 Aethionema arabicum HOM05D004469 ORTHO05D005429 7.5e-226 787.3 558 75.6
Carub.0003s2782 Capsella rubella HOM05D004469 ORTHO05D005429 1.2e-220 770.0 571 73.7
BcaC01g03128 Brassica carinata HOM05D004469 ORTHO05D005429 1.7e-201 706.4 387 99.7
THA.LOC104808947 Tarenaya hassleriana HOM05D004469 ORTHO05D005429 2.7e-183 646.0 575 61.7
Thecc.09G137700 Theobroma cacao HOM05D004469 ORTHO05D005429 5.9e-170 601.7 562 60.1
Cpa.g.sc46.70 Carica papaya HOM05D004469 ORTHO05D005429 1.4e-168 597.0 566 56.9
Ciclev10007887m.g Citrus clementina HOM05D004469 ORTHO05D005429 2.5e-168 596.3 558 57.5
Atru.chr7.2015 Acer truncatum HOM05D004469 ORTHO05D005429 6.1e-167 591.7 556 56.8
CiPaw.04G177500 Carya illinoinensis HOM05D004469 ORTHO05D005429 1.0e-166 590.9 570 56.1
Prupe.7G257500 Prunus persica HOM05D004469 ORTHO05D005429 3.9e-166 589.0 561 57.8
arahy.Tifrunner.gnm1.ann1.2E9WSC Arachis hypogaea HOM05D004469 ORTHO05D005429 6.7e-166 588.2 567 56.3
arahy.Tifrunner.gnm1.ann1.K75BJP Arachis hypogaea HOM05D004469 ORTHO05D005429 1.1e-165 587.4 565 56.6
MD15G1162100 Malus domestica HOM05D004469 ORTHO05D005429 4.8e-164 582.0 564 56.0
COL.COLO4_33364 Corchorus olitorius HOM05D004469 ORTHO05D005429 1.1e-163 580.9 562 57.3
Glyma.15G198300 Glycine max HOM05D004469 ORTHO05D005429 1.1e-163 580.9 558 54.5
Gohir.D08G101600 Gossypium hirsutum HOM05D004469 ORTHO05D005429 3.1e-163 579.3 566 58.0
Gorai.004G109600 Gossypium raimondii HOM05D004469 ORTHO05D005429 5.3e-163 578.6 566 57.8
QL02p090812 Quercus lobata HOM05D004469 ORTHO05D005429 5.3e-163 578.6 575 55.8
Glyma.09G091700 Glycine max HOM05D004469 ORTHO05D005429 2.0e-162 576.6 559 54.9
RcHm_v2.0_Chr5g0061231 Rosa chinensis HOM05D004469 ORTHO05D005429 4.5e-162 575.5 574 55.2
Gohir.A08G091100 Gossypium hirsutum HOM05D004469 ORTHO05D005429 7.7e-162 574.7 564 57.4
FvH4_1g01990 Fragaria vesca HOM05D004469 ORTHO05D005429 1.0e-161 574.3 561 58.1
RcHm_v2.0_Chr2g0087051 Rosa chinensis HOM05D004469 ORTHO05D005429 1.0e-161 574.3 563 57.4
Cfa002260 Carpinus fangiana HOM05D004469 ORTHO05D005429 1.3e-161 573.9 559 55.5
TWI32G1222 Tripterygium wilfordii HOM05D004469 ORTHO05D005429 1.3e-161 573.9 561 55.6
Lj6g0024161 Lotus japonicus HOM05D004469 ORTHO05D005429 8.5e-161 571.2 563 54.9
Duzib187G0975 Durio zibethinus HOM05D004469 ORTHO05D005429 2.5e-160 569.7 579 55.4
Phvul.009G212100 Phaseolus vulgaris HOM05D004469 ORTHO05D005429 3.2e-160 569.3 559 54.2
Medtr2g450730 Medicago truncatula HOM05D004469 ORTHO05D005429 1.2e-159 567.4 555 54.1
Nn2g12194 Nelumbo nucifera HOM05D004469 ORTHO05D005429 2.7e-159 566.2 574 53.8
CANSAT11G1945 Cannabis sativa HOM05D004469 ORTHO05D005429 4.7e-159 565.5 566 55.5
Ca_03095_v3 Cicer arietinum L. HOM05D004469 ORTHO05D005429 4.7e-159 565.5 557 53.9
Lalb_Chr11g0073091 Lupinus albus HOM05D004469 ORTHO05D005429 4.7e-159 565.5 580 52.8
PGR102G2677 Punica granatum HOM05D004469 ORTHO05D005429 1.0e-158 564.3 567 53.8
FAN28G2138 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.4e-158 563.9 577 56.3
FAN26G0918 Fragaria x ananassa HOM05D004469 ORTHO05D005429 3.9e-158 562.4 561 57.2
Manes.14G119700 Manihot esculenta HOM05D004469 ORTHO05D005429 3.9e-158 562.4 556 56.1
Haze_25443 Corylus avellana HOM05D004469 ORTHO05D005429 1.1e-157 560.8 572 54.4
CSS0041761 Camellia sinensis var. sinensis HOM05D004469 ORTHO05D005429 5.7e-157 558.5 576 54.0
TAR625G0398 Trochodendron aralioides HOM05D004469 ORTHO05D005429 5.7e-157 558.5 557 54.2
FAN19G1855 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.3e-156 557.4 577 56.0
GSVIVG01012860001 Vitis vinifera HOM05D004469 ORTHO05D005429 2.2e-156 556.6 573 53.1
VMungo1309G2337 Vigna mungo HOM05D004469 ORTHO05D005429 3.7e-156 555.8 562 53.6
FAN21G2818 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.8e-156 555.4 569 55.4
MELO3C004484.2 Cucumis melo HOM05D004469 ORTHO05D005429 1.4e-155 553.9 562 55.5
FAN23G0971 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.8e-155 553.5 577 56.0
Potri.018G118143 Populus trichocarpa HOM05D004469 ORTHO05D005429 5.3e-155 552.0 565 54.5
SalBow1G3789 Salvia bowleyana HOM05D004469 ORTHO05D005429 1.2e-154 550.8 575 51.1
CsaV3_2G003380 Cucumis sativus L. HOM05D004469 ORTHO05D005429 2.6e-154 549.7 563 54.5
Sed0012323 Sechium edule HOM05D004469 ORTHO05D005429 2.6e-154 549.7 560 54.5
Sabra06G0044100 Salix brachista HOM05D004469 ORTHO05D005429 4.5e-154 548.9 568 53.9
Psat1g021280 Pisum sativum HOM05D004469 ORTHO05D005429 8.5e-153 544.7 571 51.8
arahy.Tifrunner.gnm1.ann1.T08WW4 Arachis hypogaea HOM05D004469 ORTHO05D005429 1.1e-152 544.3 559 53.8
Actinidia26357 Actinidia chinensis HOM05D004469 ORTHO05D005429 1.5e-152 543.9 565 52.0
FAN11G3069 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.5e-152 543.9 567 54.9
FvH4_3g33700 Fragaria vesca HOM05D004469 ORTHO05D005429 1.9e-152 543.5 567 54.7
Sc08g0006010 Simmondsia chinensis HOM05D004469 ORTHO05D005429 3.2e-152 542.7 558 53.0
EL10Ac8g18788 Beta vulgaris HOM05D004469 ORTHO05D005429 7.2e-152 541.6 559 52.8
Sopen07g003440 Solanum pennellii HOM05D004469 ORTHO05D005429 7.2e-152 541.6 558 53.8
CAN.G1281.7 Capsicum annuum HOM05D004469 ORTHO05D005429 9.4e-152 541.2 563 52.8
Solyc07g007370.3 Solanum lycopersicum HOM05D004469 ORTHO05D005429 9.4e-152 541.2 558 53.8
Migut.J01235 Erythranthe guttata HOM05D004469 ORTHO05D005429 1.2e-151 540.8 571 52.2
Nitab4.5_0002286g0020 Nicotiana tabacum HOM05D004469 ORTHO05D005429 1.2e-151 540.8 555 52.6
Cc06_g07630 Coffea canephora HOM05D004469 ORTHO05D005429 1.6e-151 540.4 559 52.1
ClCG11G003510 Citrullus lanatus HOM05D004469 ORTHO05D005429 2.7e-151 539.7 563 54.0
PGSC0003DMG400030724 Solanum tuberosum HOM05D004469 ORTHO05D005429 3.6e-151 539.3 558 53.4
AUR62011228 Chenopodium quinoa HOM05D004469 ORTHO05D005429 8.0e-151 538.1 573 52.0
Peaxi162Scf00088g00521 Petunia axillaris HOM05D004469 ORTHO05D005429 8.0e-151 538.1 561 52.9
Rhsim03G0253400 Rhododendron simsii HOM05D004469 ORTHO05D005429 8.0e-151 538.1 565 52.6
Nitab4.5_0002845g0050 Nicotiana tabacum HOM05D004469 ORTHO05D005429 1.4e-150 537.3 552 52.5
MSTRG.19616 Avicennia marina HOM05D004469 ORTHO05D005429 3.3e-149 532.7 564 51.6
AUR62020006 Chenopodium quinoa HOM05D004469 ORTHO05D005429 3.3e-149 532.7 572 51.9
Lsat_1_v5_gn_5_92700 Lactuca sativa HOM05D004469 ORTHO05D005429 1.7e-148 530.4 562 50.9
Aqoxy7G03591 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 1.1e-147 527.7 558 52.3
DCAR_014918 Daucus carota HOM05D004469 ORTHO05D005429 1.8e-147 526.9 567 51.5
Hund09311 Selenicereus undatus HOM05D004469 ORTHO05D005429 3.1e-147 526.2 561 53.7
Lj9C704T18 Lonicera japonica HOM05D004469 ORTHO05D005429 2.0e-146 523.5 579 51.5
HanXRQChr10g0314151 Helianthus annuus HOM05D004469 ORTHO05D005429 2.9e-145 519.6 549 50.1
ECA234G1865 Erigeron canadensis HOM05D004469 ORTHO05D005429 5.0e-145 518.8 549 51.0
MBI14_g24228_MAGBIO Magnolia biondii HOM05D004469 ORTHO05D005429 5.0e-145 518.8 554 52.9
ATR0767G179 Amborella trichopoda HOM05D004469 ORTHO05D005429 3.4e-141 506.1 561 49.4
PSO210G6517 Papaver somniferum HOM05D004469 ORTHO05D005429 2.2e-140 503.4 571 50.1
TPR.G23109 Trifolium pratense HOM05D004469 ORTHO05D005429 1.1e-139 501.1 558 49.5
Oeu028017.1 Olea europaea HOM05D004469 ORTHO05D005429 1.3e-137 494.2 555 50.1
Sabra18G0101500 Salix brachista HOM05D004469 ORTHO05D005429 1.1e-136 491.1 577 49.9
vmacro06114 Vaccinium macrocarpon HOM05D004469 ORTHO05D005429 1.1e-136 491.1 668 44.0
Sabra18G0099700 Salix brachista HOM05D004469 ORTHO05D005429 2.5e-136 490.0 577 49.7
Aqoxy3G02754 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 1.5e-133 480.7 481 55.7
arahy.Tifrunner.gnm1.ann1.FNUG0A Arachis hypogaea HOM05D004469 ORTHO05D005429 3.5e-130 469.5 597 46.2
HPP92_003256 Vanilla planifolia HOM05D004469 ORTHO05D005429 2.1e-127 460.3 553 47.2
unitig_27.g25106 Utricularia gibba HOM05D004469 ORTHO05D005429 2.3e-126 456.8 576 46.4
Zm00001eb068670 Zea mays HOM05D004469 ORTHO05D005429 3.5e-122 443.0 574 46.5
SEGI_05144 Sequoiadendron giganteum HOM05D004469 ORTHO05D005429 6.8e-118 428.7 507 46.9
FAN16G0997 Fragaria x ananassa HOM05D004469 ORTHO05D005429 8.3e-116 421.8 489 48.7
Pp3c3_18690 Physcomitrium patens HOM05D004469 ORTHO05D005429 1.4e-115 421.0 568 44.7
Eucgr.L03235 Eucalyptus grandis HOM05D004469 ORTHO05D005429 3.0e-113 413.3 417 54.4
FAN25G0032 Fragaria x ananassa HOM05D004469 ORTHO05D005429 3.9e-113 412.9 503 50.7
Duzib168G2240 Durio zibethinus HOM05D004469 ORTHO05D005429 7.3e-112 408.7 560 45.5
Glyma.17G107100 Glycine max HOM05D004469 ORTHO05D005429 2.3e-110 403.7 571 46.6
Mapoly0101s0042 Marchantia polymorpha HOM05D004469 ORTHO05D005429 3.7e-108 396.4 552 43.1
Dinv41443 Davidia involucrata HOM05D004469 ORTHO05D005429 6.4e-108 395.6 416 53.1
Potri.006G061500 Populus trichocarpa HOM05D004469 ORTHO05D005429 7.8e-106 388.7 447 49.4
AagrBONN_evm.TU.Sc2ySwM_344.1954 Anthoceros agrestis HOM05D004469 ORTHO05D005429 3.9e-105 386.3 557 43.3
Duzib168G2148 Durio zibethinus HOM05D004469 ORTHO05D005429 1.2e-101 374.8 281 67.6
Eucgr.L03187 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.0e-101 374.0 307 61.2
Actinidia14229 Actinidia chinensis HOM05D004469 ORTHO05D005429 1.1e-96 358.2 373 50.9
SMO367G0076 Selaginella moellendorffii HOM05D004469 ORTHO05D005429 7.3e-96 355.5 565 38.6
arahy.Tifrunner.gnm1.ann1.WC6UXQ Arachis hypogaea HOM05D004469 ORTHO05D005429 1.0e-81 308.5 464 41.6
arahy.Tifrunner.gnm1.ann1.CP8KSN Arachis hypogaea HOM05D004469 ORTHO05D005429 2.4e-78 297.4 497 39.8
RcHm_v2.0_Chr5g0016251 Rosa chinensis HOM05D004469 ORTHO05D005429 2.3e-73 280.8 464 43.3
CDE05G2521 Ceratophyllum demersum HOM05D004469 ORTHO05D005429 6.2e-71 272.7 345 47.0
CiPaw.04G177800 Carya illinoinensis HOM05D004469 ORTHO05D005429 9.3e-67 258.8 312 49.4
Cre03.g205650 Chlamydomonas reinhardtii HOM05D004469 ORTHO05D005429 2.3e-65 254.2 411 38.9
FAN28G2979 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.6e-58 231.5 221 54.8
RcHm_v2.0_Chr1g0341141 Rosa chinensis HOM05D004469 ORTHO05D005429 9.7e-56 222.2 190 61.6
Eucgr.C04403 Eucalyptus grandis HOM05D004469 ORTHO05D005429 1.5e-53 214.9 178 65.7
RcHm_v2.0_Chr5g0079831 Rosa chinensis HOM05D004469 ORTHO05D005429 3.4e-53 213.8 486 38.1
Nitab4.5_0010073g0010 Nicotiana tabacum HOM05D004469 ORTHO05D005429 4.2e-51 206.8 157 61.8
RcHm_v2.0_Chr5g0061311 Rosa chinensis HOM05D004469 ORTHO05D005429 8.2e-39 166.0 140 60.0
Eucgr.C04399 Eucalyptus grandis HOM05D004469 ORTHO05D005429 1.4e-38 165.2 148 56.1
CBR_g57083 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-36 159.1 318 37.4
RcHm_v2.0_Chr5g0072041 Rosa chinensis HOM05D004469 ORTHO05D005429 4.7e-34 150.2 139 59.7
RcHm_v2.0_Chr5g0016141 Rosa chinensis HOM05D004469 ORTHO05D005429 6.1e-34 149.8 121 62.0
RcHm_v2.0_Chr1g0314541 Rosa chinensis HOM05D004469 ORTHO05D005429 6.7e-33 146.4 121 60.3
CDE05G0946 Ceratophyllum demersum HOM05D004469 ORTHO05D005429 3.5e-29 134.0 141 51.8
CBR_g42181 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-27 127.5 177 46.9
Oeu028136.1 Olea europaea HOM05D004469 ORTHO05D005429 4.7e-18 97.1 115 47.0
RcHm_v2.0_Chr2g0147321 Rosa chinensis HOM05D004469 ORTHO05D005429 8.8e-17 92.8 86 55.8
RcHm_v2.0_Chr5g0016131 Rosa chinensis HOM05D004469 ORTHO05D005429 1.2e-16 92.4 88 59.1
RcHm_v2.0_Chr5g0072051 Rosa chinensis HOM05D004469 ORTHO05D005429 1.8e-14 85.1 284 28.2
Aqoxy4G01419 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 9.2e-14 82.8 105 45.7
HanXRQChr04g0107841 Helianthus annuus HOM05D004469 ORTHO05D005429 9.2e-14 82.8 84 51.2
Eucgr.E04270 Eucalyptus grandis HOM05D000097 ORTHO05D000041 1.0e-12 79.3 56 57.1
RcHm_v2.0_Chr7g0241361 Rosa chinensis HOM05D004469 ORTHO05D005429 5.7e-08 63.5 42 61.9
RcHm_v2.0_Chr5g0069491 Rosa chinensis HOM05D004469 ORTHO05D005429 3.2e-06 57.8 48 62.5
Eucgr.E04269 Eucalyptus grandis HOM05D004469 ORTHO05D005429 4.1e-06 57.4 46 52.2
Thecc.08G193600 Theobroma cacao HOM05D004469 ORTHO05D005429 4.1e-06 57.4 47 55.3
vmacro11088 Vaccinium macrocarpon HOM05D004469 ORTHO05D426737 4.1e-06 57.4 43 53.5


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