Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p55350 Brassica napus HOM05D000325 ORTHO05D000583 2.4e-93 345.5 178 100.0
BolC3t17807H Brassica oleracea HOM05D000325 ORTHO05D000583 6.2e-89 330.9 179 97.2
BcaC01g03180 Brassica carinata HOM05D000325 ORTHO05D000583 5.8e-55 218.0 152 80.9
BraA03t13588Z Brassica rapa HOM05D000325 ORTHO05D000583 1.5e-50 203.4 170 71.8
A03p44550 Brassica napus HOM05D000325 ORTHO05D000583 2.5e-50 202.6 170 71.2
Thhalv10003332m.g Eutrema salsugineum HOM05D000325 ORTHO05D000583 1.9e-45 186.4 214 53.7
BcaB08g37464 Brassica carinata HOM05D000325 ORTHO05D000583 3.1e-40 169.1 168 64.3
BcaB08g37467 Brassica carinata HOM05D000325 ORTHO05D000583 3.1e-40 169.1 168 64.3
Thhalv10021964m.g Eutrema salsugineum HOM05D000325 ORTHO05D000583 2.9e-38 162.5 211 49.8
Sp3g13740 Schrenkiella parvula HOM05D000325 ORTHO05D000583 1.8e-35 153.3 214 45.8
BcaB08g37465 Brassica carinata HOM05D000325 ORTHO05D000583 2.6e-31 139.4 168 57.1
CARHR090530 Cardamine hirsuta HOM05D000325 ORTHO05D000583 2.6e-31 139.4 224 42.9
BolC5t33854H Brassica oleracea HOM05D000325 ORTHO05D000583 3.4e-31 139.0 214 44.4
AT3G15490 Arabidopsis thaliana HOM05D000325 ORTHO05D000583 1.7e-30 136.7 208 41.3
AL3G28050 Arabidopsis lyrata HOM05D000325 ORTHO05D000583 5.0e-30 135.2 213 41.3
A05p33930 Brassica napus HOM05D000325 ORTHO05D000583 1.9e-29 133.3 214 43.9
BraA05t22215Z Brassica rapa HOM05D000325 ORTHO05D000583 1.9e-29 133.3 214 43.9
BcaC05g28974 Brassica carinata HOM05D000325 ORTHO05D000583 3.2e-29 132.5 214 43.5
C05p51680 Brassica napus HOM05D000325 ORTHO05D000583 3.2e-29 132.5 214 43.5
BcaB06g29583 Brassica carinata HOM05D000325 ORTHO05D000583 5.5e-29 131.7 216 41.7
Sp3g23580 Schrenkiella parvula HOM05D000325 ORTHO05D000583 3.8e-22 109.0 126 51.6
Carub.0003s1521 Capsella rubella HOM05D000325 ORTHO05D000583 3.9e-19 99.0 214 37.9
A01p38770 Brassica napus HOM05D000325 ORTHO05D000583 1.1e-18 97.4 176 39.2
C01p48990 Brassica napus HOM05D000325 ORTHO05D000583 2.6e-18 96.3 189 36.0
BraA01t03908Z Brassica rapa HOM05D000325 ORTHO05D000583 5.7e-18 95.1 176 38.6
BcaC09g48511 Brassica carinata HOM05D000325 ORTHO05D000583 1.3e-17 94.0 189 35.4
BolC1t04863H Brassica oleracea HOM05D000325 ORTHO05D000583 2.0e-15 86.7 191 35.1
Aa31LG8G2720 Aethionema arabicum HOM05D000325 ORTHO05D000583 5.9e-15 85.1 137 38.7
Carub.0006s3145 Capsella rubella HOM05D000325 ORTHO05D000583 2.9e-14 82.8 159 35.8
BcaB04g20923 Brassica carinata HOM05D000325 ORTHO05D000583 1.1e-08 64.3 168 30.4
THA.LOC104810606 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 2.4e-08 63.2 145 33.1
Prupe.4G186000 Prunus persica HOM05D000325 ORTHO05D000583 9.1e-08 61.2 192 29.7
Haze_09482 Corylus avellana HOM05D000325 ORTHO05D000583 7.7e-07 58.2 140 31.4
Haze_09486 Corylus avellana HOM05D000325 ORTHO05D000583 1.0e-06 57.8 140 31.4


User provided reference genes

Program Settings