Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p55210 Brassica napus HOM05D008895 ORTHO05D012825 1.5e-42 175.6 82 100.0
BolC3t17794H Brassica oleracea HOM05D008895 ORTHO05D012825 1.5e-42 175.6 82 100.0
C03p55220 Brassica napus HOM05D008895 ORTHO05D012825 2.4e-40 168.3 82 96.3
BolC3t17795H Brassica oleracea HOM05D008895 ORTHO05D012825 2.4e-40 168.3 82 96.3
A03p44450 Brassica napus HOM05D008895 ORTHO05D012825 3.2e-40 167.9 82 95.1
C03p55150 Brassica napus HOM05D008895 ORTHO05D012825 3.2e-40 167.9 82 95.1
BolC3t17787H Brassica oleracea HOM05D008895 ORTHO05D012825 3.2e-40 167.9 82 95.1
BraA03t13578Z Brassica rapa HOM05D008895 ORTHO05D012825 3.2e-40 167.9 82 95.1
C03p55160 Brassica napus HOM05D008895 ORTHO05D012825 5.4e-40 167.2 82 95.1
C03p55190 Brassica napus HOM05D008895 ORTHO05D012825 5.4e-40 167.2 82 95.1
C03p55200 Brassica napus HOM05D008895 ORTHO05D012825 5.4e-40 167.2 82 95.1
BolC3t17788H Brassica oleracea HOM05D008895 ORTHO05D012825 5.4e-40 167.2 82 95.1
BolC3t17792H Brassica oleracea HOM05D008895 ORTHO05D012825 5.4e-40 167.2 82 95.1
BolC3t17791H Brassica oleracea HOM05D008895 ORTHO05D012825 9.0e-35 149.8 72 93.1
BolC3t17793H Brassica oleracea HOM05D008895 ORTHO05D012825 2.4e-32 141.7 82 84.1
A08p15980 Brassica napus HOM05D008895 ORTHO05D012825 1.9e-21 105.5 75 62.7
BraA08t33570Z Brassica rapa HOM05D008895 ORTHO05D012825 1.9e-21 105.5 75 62.7
BolC3t20732H Brassica oleracea HOM05D008895 ORTHO05D012825 9.6e-21 103.2 75 61.3
C03p55230 Brassica napus HOM05D008895 ORTHO05D012825 4.3e-13 77.8 41 95.1
BolC3t17796H Brassica oleracea HOM05D008895 ORTHO05D012825 4.3e-13 77.8 41 95.1
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.0e-10 68.9 81 43.2
AT5G42232 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.0e-10 68.9 80 45.0
AT1G58055 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.6e-10 68.6 79 43.0
CARHR028360 Cardamine hirsuta HOM05D009058 ORTHO05D010761 2.2e-09 65.5 81 45.7
AL2G17930 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.9e-09 65.1 79 43.0
Carub.0003s2779 Capsella rubella HOM05D008895 ORTHO05D010761 8.4e-09 63.5 81 40.7
AL8G19430 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.4e-08 62.8 81 38.3
Carub.0008s0699 Capsella rubella HOM05D008895 ORTHO05D010761 1.4e-08 62.8 77 40.3
AT5G42235 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.9e-08 62.4 83 38.6
Carub.0003s3322 Capsella rubella HOM05D008895 ORTHO05D010761 2.5e-08 62.0 80 42.5
AL8G19410 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 3.2e-08 61.6 81 39.5
AT2G12475 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 7.1e-08 60.5 81 40.7
AL8G19420 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 9.3e-08 60.1 81 39.5
AL8G19452 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 9.3e-08 60.1 81 39.5
CARHR052530 Cardamine hirsuta HOM05D008895 ORTHO05D010761 9.3e-08 60.1 80 37.5
A09p10320 Brassica napus HOM05D009058 ORTHO05D010761 2.7e-07 58.5 78 38.5
AL8G19400 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 7.9e-07 57.0 81 38.3
A03p44280 Brassica napus HOM05D009058 ORTHO05D010761 2.3e-06 55.5 77 32.5
A05p41130 Brassica napus HOM05D029002 ORTHO05D027863 2.3e-06 55.5 79 39.2
C05p60310 Brassica napus HOM05D029002 ORTHO05D027863 2.3e-06 55.5 79 39.2
BolC5t34679H Brassica oleracea HOM05D029002 ORTHO05D027863 2.3e-06 55.5 79 39.2
Carub.0008s0698 Capsella rubella HOM05D008895 ORTHO05D010761 2.3e-06 55.5 82 34.1
BraA05t22839Z Brassica rapa HOM05D029002 ORTHO05D027863 3.0e-06 55.1 79 39.2
AT2G40995 Arabidopsis thaliana HOM05D009157 ORTHO05D011114 6.7e-06 53.9 83 42.2
BcaC07g41482 Brassica carinata HOM05D009997 ORTHO05D013470 6.7e-06 53.9 87 39.1
C08p44800 Brassica napus HOM05D009997 ORTHO05D013470 6.7e-06 53.9 87 39.1
BolC8t52025H Brassica oleracea HOM05D009997 ORTHO05D013470 6.7e-06 53.9 87 39.1


User provided reference genes

Program Settings