Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p55160 Brassica napus HOM05D008895 ORTHO05D012825 8.9e-43 176.4 82 100.0
C03p55190 Brassica napus HOM05D008895 ORTHO05D012825 8.9e-43 176.4 82 100.0
C03p55200 Brassica napus HOM05D008895 ORTHO05D012825 8.9e-43 176.4 82 100.0
BolC3t17788H Brassica oleracea HOM05D008895 ORTHO05D012825 8.9e-43 176.4 82 100.0
BolC3t17792H Brassica oleracea HOM05D008895 ORTHO05D012825 8.9e-43 176.4 82 100.0
C03p55220 Brassica napus HOM05D008895 ORTHO05D012825 8.4e-41 169.9 82 96.3
BolC3t17795H Brassica oleracea HOM05D008895 ORTHO05D012825 8.4e-41 169.9 82 96.3
A03p44450 Brassica napus HOM05D008895 ORTHO05D012825 1.1e-40 169.5 82 95.1
C03p55150 Brassica napus HOM05D008895 ORTHO05D012825 1.1e-40 169.5 82 95.1
BolC3t17787H Brassica oleracea HOM05D008895 ORTHO05D012825 1.1e-40 169.5 82 95.1
BraA03t13578Z Brassica rapa HOM05D008895 ORTHO05D012825 1.1e-40 169.5 82 95.1
C03p55210 Brassica napus HOM05D008895 ORTHO05D012825 4.2e-40 167.5 82 95.1
BolC3t17794H Brassica oleracea HOM05D008895 ORTHO05D012825 4.2e-40 167.5 82 95.1
BolC3t17791H Brassica oleracea HOM05D008895 ORTHO05D012825 2.1e-36 155.2 72 95.8
BolC3t17793H Brassica oleracea HOM05D008895 ORTHO05D012825 8.4e-33 143.3 82 84.1
A08p15980 Brassica napus HOM05D008895 ORTHO05D012825 4.3e-21 104.4 75 62.7
BraA08t33570Z Brassica rapa HOM05D008895 ORTHO05D012825 4.3e-21 104.4 75 62.7
BolC3t20732H Brassica oleracea HOM05D008895 ORTHO05D012825 2.1e-20 102.1 75 61.3
C03p55230 Brassica napus HOM05D008895 ORTHO05D012825 1.8e-14 82.4 42 97.6
BolC3t17796H Brassica oleracea HOM05D008895 ORTHO05D012825 1.8e-14 82.4 42 97.6
AT1G58055 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.0e-10 68.9 79 43.0
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 3.4e-10 68.2 81 43.2
AT5G42232 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 5.8e-10 67.4 80 43.8
AL2G17930 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.2e-09 65.5 79 43.0
Carub.0003s2779 Capsella rubella HOM05D008895 ORTHO05D010761 8.4e-09 63.5 81 40.7
AL8G19430 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.5e-08 62.0 81 38.3
AT5G42235 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.5e-08 62.0 83 38.6
Carub.0003s3322 Capsella rubella HOM05D008895 ORTHO05D010761 2.5e-08 62.0 80 42.5
AT2G12475 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 4.2e-08 61.2 83 42.2
Carub.0008s0699 Capsella rubella HOM05D008895 ORTHO05D010761 4.2e-08 61.2 77 39.0
CARHR028360 Cardamine hirsuta HOM05D009058 ORTHO05D010761 4.2e-08 61.2 81 42.0
CARHR052530 Cardamine hirsuta HOM05D008895 ORTHO05D010761 5.5e-08 60.8 80 37.5
AL8G19410 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.6e-07 59.3 81 38.3
AL8G19420 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.1e-07 58.9 81 37.0
AL8G19452 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.1e-07 58.9 81 37.0
A09p10320 Brassica napus HOM05D009058 ORTHO05D010761 7.9e-07 57.0 78 37.2
AL8G19400 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.8e-06 55.8 81 35.8
Carub.0001s1553 Capsella rubella HOM05D009997 ORTHO05D013470 6.7e-06 53.9 86 41.9
Carub.0008s0698 Capsella rubella HOM05D008895 ORTHO05D010761 6.7e-06 53.9 82 32.9


User provided reference genes

Program Settings