Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 8.2e-91 337.0 169 100.0
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 8.2e-91 337.0 169 100.0
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 5.3e-90 334.3 169 98.8
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 3.7e-75 285.0 155 91.0
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 3.1e-74 282.0 149 93.3
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 6.9e-74 280.8 146 95.2
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.0e-73 279.3 146 95.2
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 4.5e-73 278.1 146 93.8
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 5.9e-73 277.7 165 80.0
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.8e-72 275.0 166 80.1
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.6e-70 269.6 165 80.0
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.0e-68 262.7 132 98.5
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 9.7e-68 260.4 138 91.3
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 7.0e-66 254.2 165 79.4
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 3.5e-65 251.9 163 75.5
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 3.5e-57 225.3 162 67.9
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.0e-48 197.2 149 67.8
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 5.0e-48 194.9 166 56.0
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 5.0e-48 194.9 148 62.2
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 6.5e-48 194.5 156 59.0
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 9.4e-47 190.7 153 59.5
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.2e-46 190.3 147 61.9
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.1e-46 189.5 147 59.9
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 8.0e-46 187.6 147 59.2
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.4e-45 186.8 166 56.6
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 1.4e-45 186.8 147 60.5
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.8e-45 186.4 151 59.6
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 1.8e-45 186.4 161 55.9
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 2.3e-45 186.0 166 55.4
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 2.3e-45 186.0 148 59.5
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.3e-45 186.0 147 58.5
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.3e-45 186.0 167 53.3
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 3.0e-45 185.7 146 61.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 5.2e-45 184.9 167 54.5
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 8.8e-45 184.1 147 58.5
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.2e-44 183.7 146 59.6
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.5e-44 183.3 151 57.6
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.0e-44 183.0 151 58.9
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 3.4e-44 182.2 151 56.3
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 4.4e-44 181.8 150 58.0
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 5.7e-44 181.4 165 53.3
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.7e-43 179.9 165 52.7
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.7e-43 179.9 148 57.4
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.2e-43 179.5 146 58.9
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 2.2e-43 179.5 160 54.4
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-43 179.1 152 55.9
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-43 179.1 152 55.9
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-43 179.1 152 55.9
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 2.8e-43 179.1 149 55.7
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.7e-43 178.7 152 55.3
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 2.4e-42 176.0 153 54.2
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.1e-42 175.3 149 56.4
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 7.0e-42 174.5 163 55.2
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 9.1e-42 174.1 153 53.6
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 9.1e-42 174.1 158 53.2
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.7e-41 172.6 157 52.9
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 2.7e-41 172.6 149 55.7
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 5.9e-41 171.4 154 53.9
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 5.9e-41 171.4 154 55.2
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.3e-40 170.2 160 55.0
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.3e-40 170.2 148 54.1
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.7e-40 169.9 162 52.5
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.3e-40 169.5 143 55.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 2.3e-40 169.5 165 50.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 5.0e-40 168.3 162 53.1
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.9e-39 166.4 132 61.4
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 4.2e-39 165.2 165 51.5
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 7.2e-39 164.5 167 49.7
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 9.5e-39 164.1 152 53.9
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.6e-38 163.3 160 50.6
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 8.0e-38 161.0 164 50.0
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.3e-37 159.5 237 40.9
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 4.0e-37 158.7 130 57.7
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 6.8e-37 157.9 154 53.2
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 8.9e-37 157.5 131 57.3
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 5.7e-36 154.8 130 56.9
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 7.5e-36 154.5 150 53.3
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 3.7e-35 152.1 141 51.8
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.4e-34 150.2 132 55.3
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 1.8e-34 149.8 146 52.7
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 4.1e-34 148.7 213 39.9
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.1e-31 140.6 149 47.7
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 3.3e-31 139.0 143 44.1
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.6e-30 136.7 129 51.9
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 6.1e-30 134.8 150 48.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.0e-29 134.0 154 46.1
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 1.8e-29 133.3 152 46.1
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.4e-26 123.6 113 52.2
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 1.2e-25 120.6 133 45.1
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.0e-24 117.5 100 56.0
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 3.3e-23 112.5 139 42.4
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.3e-23 112.1 144 38.2
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 9.5e-23 110.9 74 75.7
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.8e-21 104.8 83 62.7
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 9.8e-20 100.9 87 51.7
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 2.9e-19 99.4 146 34.2
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.7e-19 99.0 76 61.8
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.4e-18 97.1 87 56.3
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.2e-18 95.9 79 59.5
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 5.4e-18 95.1 85 54.1
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 9.2e-18 94.4 80 58.8
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 1.6e-17 93.6 82 47.6
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 2.7e-17 92.8 87 49.4
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 2.7e-17 92.8 90 53.3
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 2.7e-17 92.8 73 54.8
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 7.8e-17 91.3 64 71.9
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.0e-16 89.4 74 52.7
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.1e-14 83.2 67 64.2
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.4e-12 75.5 106 39.6
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 8.3e-11 71.2 65 55.4


User provided reference genes

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