Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p37120 Brassica napus HOM05D003594 ORTHO05D004268 5.0e-44 180.6 87 100.0
C03p54150 Brassica napus HOM05D003594 ORTHO05D004268 5.0e-44 180.6 87 100.0
BolC5t29265H Brassica oleracea HOM05D003594 ORTHO05D004268 5.0e-44 180.6 87 100.0
A03p57890 Brassica napus HOM05D003594 ORTHO05D004268 1.5e-43 179.1 87 98.9
BraA03t14853Z Brassica rapa HOM05D003594 ORTHO05D004268 1.5e-43 179.1 87 98.9
A02p30260 Brassica napus HOM05D003594 ORTHO05D004268 2.5e-43 178.3 87 97.7
C03p91380 Brassica napus HOM05D003594 ORTHO05D004268 7.3e-43 176.8 87 98.9
BolC3t21454H Brassica oleracea HOM05D003594 ORTHO05D004268 7.3e-43 176.8 87 98.9
BolC7t45516H Brassica oleracea HOM05D003594 ORTHO05D004268 4.7e-42 174.1 87 97.7
BcaB03g12203 Brassica carinata HOM05D003594 ORTHO05D004268 3.2e-30 134.8 72 88.9
C03p15410 Brassica napus HOM05D003594 ORTHO05D004268 5.4e-30 134.0 69 95.7
A09p36300 Brassica napus HOM05D003594 ORTHO05D004268 1.2e-29 132.9 72 87.5
BraA09t39154Z Brassica rapa HOM05D003594 ORTHO05D004268 1.2e-29 132.9 72 87.5
BcaC05g27050 Brassica carinata HOM05D003594 ORTHO05D004268 1.6e-29 132.5 72 87.5
C05p29080 Brassica napus HOM05D003594 ORTHO05D004268 1.6e-29 132.5 72 87.5
BolC5t31639H Brassica oleracea HOM05D003594 ORTHO05D004268 1.6e-29 132.5 72 87.5
BcaB07g32622 Brassica carinata HOM05D003594 ORTHO05D004268 3.5e-29 131.3 72 86.1
CARHR029630 Cardamine hirsuta HOM05D003594 ORTHO05D004268 1.7e-28 129.0 74 82.4
AT1G30240 Arabidopsis thaliana HOM05D003594 ORTHO05D004268 2.3e-28 128.6 72 84.7
Sp1g26080 Schrenkiella parvula HOM05D003594 ORTHO05D004268 2.3e-28 128.6 72 84.7
Thhalv10006813m.g Eutrema salsugineum HOM05D003594 ORTHO05D004268 3.9e-28 127.9 72 87.5
BcaC01g00173 Brassica carinata HOM05D003594 ORTHO05D004268 5.1e-28 127.5 72 83.3
A08p24610 Brassica napus HOM05D003594 ORTHO05D004268 5.1e-28 127.5 72 83.3
C03p76500 Brassica napus HOM05D003594 ORTHO05D004268 5.1e-28 127.5 72 83.3
BolC3t19907H Brassica oleracea HOM05D003594 ORTHO05D004268 1.1e-27 126.3 72 81.9
Carub.0001s2847 Capsella rubella HOM05D003594 ORTHO05D004268 1.1e-27 126.3 72 83.3
BraA08t34416Z Brassica rapa HOM05D003594 ORTHO05D004268 1.9e-27 125.6 72 81.9
AL1G44160 Arabidopsis lyrata HOM05D003594 ORTHO05D004268 8.1e-26 120.2 74 79.7
THA.LOC104820658 Tarenaya hassleriana HOM05D003594 ORTHO05D004268 1.3e-23 112.8 73 75.3
Aa31sc91G80 Aethionema arabicum HOM05D003594 ORTHO05D004268 3.0e-20 101.7 72 69.4
Dinv11846 Davidia involucrata HOM05D003594 ORTHO05D004268 7.3e-19 97.1 74 59.5
GSVIVG01032568001 Vitis vinifera HOM05D003594 ORTHO05D004268 9.5e-19 96.7 74 60.8
Manes.11G108901 Manihot esculenta HOM05D003594 ORTHO05D004268 3.6e-18 94.7 74 59.5
Nn4g23115 Nelumbo nucifera HOM05D003594 ORTHO05D004268 8.1e-18 93.6 74 58.1
TAR622G0410 Trochodendron aralioides HOM05D003594 ORTHO05D004268 2.4e-17 92.0 74 55.4
DCAR_006339 Daucus carota HOM05D003594 ORTHO05D004268 4.0e-17 91.3 74 58.1
Gohir.D06G176700 Gossypium hirsutum HOM05D003594 ORTHO05D004268 4.0e-17 91.3 74 56.8
Lsat_1_v5_gn_2_104580 Lactuca sativa HOM05D003594 ORTHO05D004268 8.9e-17 90.1 74 56.8
Lj3C928G2 Lonicera japonica HOM05D003594 ORTHO05D004268 8.9e-17 90.1 74 54.1
Nn3g17199 Nelumbo nucifera HOM05D003594 ORTHO05D004268 8.9e-17 90.1 74 54.1
Thecc.10G111800 Theobroma cacao HOM05D003594 ORTHO05D004268 8.9e-17 90.1 74 58.1
Gohir.A06G169100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 1.2e-16 89.7 74 55.4
Cfa011279 Carpinus fangiana HOM05D003594 ORTHO05D004268 2.0e-16 89.0 74 52.7
Cc02_g09740 Coffea canephora HOM05D003594 ORTHO05D004268 3.4e-16 88.2 74 56.8
Duzib052G0830 Durio zibethinus HOM05D003594 ORTHO05D004268 5.8e-16 87.4 74 54.1
Migut.F00912 Erythranthe guttata HOM05D003594 ORTHO05D004268 5.8e-16 87.4 74 52.7
Gorai.010G208000 Gossypium raimondii HOM05D003594 ORTHO05D004268 5.8e-16 87.4 74 54.1
Cc02_g29780 Coffea canephora HOM05D003594 ORTHO05D004268 7.6e-16 87.0 74 55.4
Peaxi162Scf00173g00417 Petunia axillaris HOM05D003594 ORTHO05D004268 9.9e-16 86.7 72 51.4
Actinidia06697 Actinidia chinensis HOM05D003594 ORTHO05D004268 1.3e-15 86.3 74 52.7
Ca_23589_v3 Cicer arietinum L. HOM05D003594 ORTHO05D004268 1.3e-15 86.3 74 54.1
SalBow6G4638 Salvia bowleyana HOM05D003594 ORTHO05D004268 1.3e-15 86.3 74 52.7
CiPaw.13G039500 Carya illinoinensis HOM05D003594 ORTHO05D004268 1.7e-15 85.9 74 52.7
FAN18G3192 Fragaria x ananassa HOM05D003594 ORTHO05D004268 1.7e-15 85.9 70 54.3
FAN18G4146 Fragaria x ananassa HOM05D003594 ORTHO05D004268 1.7e-15 85.9 70 54.3
Medtr8g028030 Medicago truncatula HOM05D003594 ORTHO05D004268 1.7e-15 85.9 74 55.4
Nitab4.5_0001437g0090 Nicotiana tabacum HOM05D003594 ORTHO05D004268 1.7e-15 85.9 74 51.4
Nitab4.5_0005622g0060 Nicotiana tabacum HOM05D003594 ORTHO05D004268 1.7e-15 85.9 74 51.4
Potri.010G238000 Populus trichocarpa HOM05D003594 ORTHO05D004268 1.7e-15 85.9 74 51.4
RcHm_v2.0_Chr7g0211051 Rosa chinensis HOM05D003594 ORTHO05D004268 1.7e-15 85.9 70 54.3
Medtr3g075460 Medicago truncatula HOM05D003594 ORTHO05D004268 2.2e-15 85.5 74 55.4
CSS0019720 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 2.9e-15 85.1 74 52.7
CSS0031708 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 2.9e-15 85.1 74 52.7
Ah.04g162260 Amaranthus hybridus HOM05D003594 ORTHO05D004268 3.8e-15 84.7 81 49.4
FvH4_5g22640 Fragaria vesca HOM05D003594 ORTHO05D004268 3.8e-15 84.7 70 52.9
Sabra10G0186200 Salix brachista HOM05D003594 ORTHO05D004268 3.8e-15 84.7 74 51.4
Sc06g0002330 Simmondsia chinensis HOM05D003594 ORTHO05D004268 3.8e-15 84.7 74 51.4
Cc02_g09730 Coffea canephora HOM05D003594 ORTHO05D004268 4.9e-15 84.3 75 56.0
Psat4g159240 Pisum sativum HOM05D003594 ORTHO05D004268 4.9e-15 84.3 74 54.1
Ciclev10027803m.g Citrus clementina HOM05D003594 ORTHO05D004268 6.4e-15 84.0 74 54.1
Phvul.010G110700 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 6.4e-15 84.0 74 50.0
TPR.G8757 Trifolium pratense HOM05D003594 ORTHO05D004268 8.4e-15 83.6 72 52.8
FAN08G1578 Fragaria x ananassa HOM05D003594 ORTHO05D004268 1.1e-14 83.2 70 51.4
Atru.chr12.1014 Acer truncatum HOM05D003594 ORTHO05D004268 1.4e-14 82.8 81 48.1
Lalb_Chr10g0100231 Lupinus albus HOM05D003594 ORTHO05D004268 1.4e-14 82.8 74 55.4
COL.COLO4_28858 Corchorus olitorius HOM05D003594 ORTHO05D004268 1.9e-14 82.4 69 55.1
Dinv06533 Davidia involucrata HOM05D003594 ORTHO05D004268 1.9e-14 82.4 76 48.7
FAN04G1757 Fragaria x ananassa HOM05D003594 ORTHO05D004268 1.9e-14 82.4 70 51.4
Glyma.07G058700 Glycine max HOM05D003594 ORTHO05D004268 2.4e-14 82.0 74 50.0
Glyma.16G027600 Glycine max HOM05D003594 ORTHO05D004268 2.4e-14 82.0 74 50.0
Solyc11g007010.2 Solanum lycopersicum HOM05D003594 ORTHO05D004268 2.4e-14 82.0 74 48.6
Sopen11g002930 Solanum pennellii HOM05D003594 ORTHO05D004268 2.4e-14 82.0 74 48.6
PGSC0003DMG400023977 Solanum tuberosum HOM05D003594 ORTHO05D004268 2.4e-14 82.0 74 50.0
TWI38G1480 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 2.4e-14 82.0 74 54.1
ECA238G3867 Erigeron canadensis HOM05D003594 ORTHO05D004268 3.2e-14 81.6 74 48.6
MBI02_g14487_MAGBIO Magnolia biondii HOM05D003594 ORTHO05D004268 4.2e-14 81.3 74 52.7
BcaB08g34816 Brassica carinata HOM05D002573 ORTHO05D002918 5.4e-14 80.9 44 88.6
MD17G1284000 Malus domestica HOM05D003594 ORTHO05D004268 5.4e-14 80.9 70 51.4
Prupe.3G003400 Prunus persica HOM05D003594 ORTHO05D004268 5.4e-14 80.9 70 50.0
CANSAT56G3624 Cannabis sativa HOM05D003594 ORTHO05D004268 7.1e-14 80.5 70 54.3
VMungo0331G0994 Vigna mungo HOM05D003594 ORTHO05D004268 9.2e-14 80.1 74 47.3
Eucgr.J00989 Eucalyptus grandis HOM05D003594 ORTHO05D004268 1.6e-13 79.3 74 50.0
Aqoxy3G00687_Aqoxy3G00688 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 2.1e-13 79.0 75 49.3
HanXRQChr11g0342181 Helianthus annuus HOM05D003594 ORTHO05D004268 2.7e-13 78.6 74 48.6
PSO017G2985 Papaver somniferum HOM05D003594 ORTHO05D004268 4.6e-13 77.8 74 47.3
PSO478G3548 Papaver somniferum HOM05D003594 ORTHO05D004268 4.6e-13 77.8 74 47.3
TWI63G1716 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 4.6e-13 77.8 75 49.3
Rhsim03G0098900 Rhododendron simsii HOM05D003594 ORTHO05D004268 1.7e-12 75.9 74 48.6
Lj1g0028024 Lotus japonicus HOM05D003594 ORTHO05D004268 2.3e-12 75.5 74 51.4
Os05g0295900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 2.3e-12 75.5 74 44.6
Sed0011677 Sechium edule HOM05D003594 ORTHO05D004268 6.6e-12 73.9 72 50.0
HPP92_013069 Vanilla planifolia HOM05D003594 ORTHO05D004268 6.6e-12 73.9 72 48.6
ClCG09G007450 Citrullus lanatus HOM05D003594 ORTHO05D004268 1.1e-11 73.2 72 50.0
MELO3C012354.2 Cucumis melo HOM05D003594 ORTHO05D004268 1.5e-11 72.8 72 50.0
ATR0737G134 Amborella trichopoda HOM05D003594 ORTHO05D004268 3.3e-11 71.6 74 45.9
Sed0007749 Sechium edule HOM05D003594 ORTHO05D004268 7.3e-11 70.5 72 48.6
Os06g0343900 Oryza sativa ssp. japonica HOM05D003594 ORTHO05D004268 9.6e-11 70.1 80 38.8
arahy.Tifrunner.gnm1.ann1.8EA83L Arachis hypogaea HOM05D003594 ORTHO05D004268 1.6e-10 69.3 74 43.2
arahy.Tifrunner.gnm1.ann1.Q3AX4Y Arachis hypogaea HOM05D003594 ORTHO05D004268 1.6e-10 69.3 74 43.2
ClCG05G018390 Citrullus lanatus HOM05D003594 ORTHO05D004268 2.1e-10 68.9 72 47.2
MSTRG.27538 Avicennia marina HOM05D003594 ORTHO05D004268 2.8e-10 68.6 51 56.9
Gohir.D09G017550 Gossypium hirsutum HOM05D003594 ORTHO05D004268 6.2e-10 67.4 75 42.7
Gorai.006G020600 Gossypium raimondii HOM05D003594 ORTHO05D004268 6.2e-10 67.4 75 42.7
Lj3g0004598 Lotus japonicus HOM05D003594 ORTHO05D004268 6.2e-10 67.4 74 47.3
Gohir.A09G018150 Gossypium hirsutum HOM05D003594 ORTHO05D004268 1.1e-09 66.6 75 42.7
Pp3c8_9490 Physcomitrium patens HOM05D003594 ORTHO05D004268 1.1e-09 66.6 77 40.3
QL04p046058 Quercus lobata HOM05D003594 ORTHO05D004268 9.0e-09 63.5 50 52.0
CDE09G0981 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 1.5e-08 62.8 75 40.0
Mapoly0108s0040 Marchantia polymorpha HOM05D003594 ORTHO05D004268 1.5e-08 62.8 77 39.0
AUR62042073 Chenopodium quinoa HOM05D003594 ORTHO05D004268 5.8e-08 60.8 65 47.7
PGR044G2128 Punica granatum HOM05D003594 ORTHO05D004268 7.6e-08 60.5 55 45.5
SGA_v2.0_scaffold295G47526 Striga asiatica HOM05D003594 ORTHO05D004268 1.3e-07 59.7 51 51.0
Oeu025587.1 Olea europaea HOM05D003594 ORTHO05D004268 1.9e-06 55.8 131 31.3


User provided reference genes

Program Settings